LOCUS       XM_006248378            1354 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus testis expressed 55 (Tex55),
            transcript variant X1, mRNA.
ACCESSION   XM_006248378
VERSION     XM_006248378.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006248378.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006248378.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1354
                     /gene="Tex55"
                     /note="testis expressed 55; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100362538"
                     /db_xref="RGD:1306995"
     CDS             52..1254
                     /gene="Tex55"
                     /codon_start=1
                     /product="testis-specific expressed protein 55 isoform X1"
                     /protein_id="XP_006248440.1"
                     /db_xref="GeneID:100362538"
                     /db_xref="RGD:1306995"
                     /translation="MDEPPLEVPDESLNHENADQTPDNQKTNTEEAGQVLHRGSEHAG
                     VGSSEPTGDKVSGQGANAGYRQATRRTSEEAEQRSSQPTEQRLPGLVERRASQPAERR
                     LSERRTSQPPSHPLPSLSEGKTSERIDGQVSLPSGGRSSEQADPGSSEQDDLSSTDET
                     YYASGKSQRQTDYWFEDPSNPHRLSEEIERDITQVRRTIENHSGYRSYYKTLARTENQ
                     SLTDIHDIREAGQRVQPCTFEDNETDIPSKVSTADETESTTTVQAYTPYDTEIMTDTQ
                     SSREKLPSITNKVYYPSSPEKIRTTEFTADITTELEQRRSSQKYSQSYRGRFPLIVFD
                     DPYQVALRYMEKHSVLQIFQQITEKLVYEMPDDPLRFMLDQVQDMIRHRDEREEDMIR
                     HTDEREDI"
ORIGIN      
        1 gccccaccca cagtgcctgg caactaagac cagacagagg tgcagcggga gatggacgag
       61 cctccgctag aggttccaga tgaatccttg aaccatgaaa acgcagacca aaccccagat
      121 aaccagaaga ccaacacaga ggaagcaggc caggtccttc acagaggttc tgaacatgct
      181 ggggttggat cctctgagcc aactggtgac aaggtttcag gccaaggcgc taatgcaggg
      241 tatagacagg ccacccgaag aacttctgaa gaggcagagc aaagatcttc tcagccaact
      301 gagcaaagat tgcctggcct tgtggagagg agagcatctc agccggcgga gcgcaggctc
      361 tctgaaagga gaacctcaca gccacccagc catccacttc ccagcctatc tgaggggaaa
      421 acctctgaga ggatagatgg ccaagtgtct ttgccatctg gtgggaggtc ttctgagcag
      481 gctgacccag gaagttcgga gcaggatgac ctgagttcaa cagatgaaac ttactatgct
      541 tcaggaaaga gtcaacgcca aacggattac tggtttgaag accctagtaa tccccacagg
      601 ctcagtgagg agattgaaag ggacattacc caagttaggc gaacaataga aaatcattct
      661 ggctaccgct catactacaa aactcttgcc cgcactgaga accaatcatt aactgatatc
      721 catgacatca gagaagctgg ccaaagagta cagccttgca cgtttgaaga caatgaaaca
      781 gacatcccat ccaaagtttc aactgcggat gaaacagaaa gcacaaccac tgtccaggcc
      841 tacaccccat acgacactga aatcatgaca gacacccagt cctcgcgtga aaagctcccc
      901 tccatcacaa acaaagtgta ctatccctcc agtccagaaa aaattcgaac cacagaattc
      961 actgctgata tcactacaga acttgagcaa agaaggagtt ctcaaaaata cagtcaaagt
     1021 tacagaggac ggttccctct gatcgttttt gatgatccct accaggttgc actccgctac
     1081 atggagaagc acagtgttct tcagatattc cagcagatca ctgaaaaact agtctatgaa
     1141 atgccagacg acccactgcg tttcatgcta gaccaggtac aggacatgat cagacacaga
     1201 gacgaaaggg aggaggacat gatcagacac acagacgaaa gggaggacat ctgaagacgg
     1261 acctccccgc agcactgctt actgtcaaca gtgtcacact gtactccacc tgctcccact
     1321 tgaaaaatga gttctcagta ggcgtcggtg gtaa
//
