LOCUS       XM_017598991             904 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus testis expressed 35 (Tex35),
            transcript variant X12, mRNA.
ACCESSION   XM_017598991
VERSION     XM_017598991.2
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086031) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Aug 7, 2024 this sequence was replaced by
            NM_001433173.1.
            
            On Jan 21, 2021 this sequence version replaced XM_017598991.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..904
                     /gene="Tex35"
                     /note="testis expressed 35; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 63
                     long SRA reads, 2 Proteins"
                     /db_xref="GeneID:680164"
                     /db_xref="RGD:1595460"
     CDS             97..702
                     /gene="Tex35"
                     /codon_start=1
                     /product="testis-expressed protein 35 isoform X12"
                     /protein_id="XP_017454480.1"
                     /db_xref="GeneID:680164"
                     /db_xref="RGD:1595460"
                     /translation="MSAKRKTNLKKSYKAVCMELKPELTQIYDVKGLKQEGLCIRKGM
                     TQELKNGLREVREELTEKIEEIKQIKNLMDKDFDKLHEFVEIMKEMQQDMDEKMDVLI
                     NIQQNNKLPFQNQPKEQQKFRKRGKMGKNSQVIIMEESDEVSLASEKMVVLPKTTNNP
                     MDPLHACEKCLLCALKTTCNQGRPSHHAWAPFSPLSSGAAF"
     polyA_site      904
                     /gene="Tex35"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 catgcccaag cctgtaagtt atataggacg gtggcctggt cacagggggc tgttgtaggg
       61 aggttgggaa gttgaagaac atctggccct tccatcatgt cagccaagag gaaaactaac
      121 ctgaaaaaga gctacaaggc cgtttgcatg gaactgaagc cagagctgac acaaatatat
      181 gatgtcaaag gacttaaaca agaagggcta tgcatcagaa aagggatgac acaggagctg
      241 aagaatggac tcagggaggt gagagaagag ctcacagaaa aaattgaaga gataaaacag
      301 ataaagaatt taatggacaa agatttcgat aaacttcatg agtttgtgga aattatgaag
      361 gaaatgcagc aggatatgga tgaaaagatg gatgttttaa ttaatattca gcagaacaac
      421 aagcttccct ttcaaaacca accaaaggag cagcagaaat tcaggaagag aggaaagatg
      481 ggcaaaaact cccaggtcat catcatggaa gaatccgatg aagtatcatt ggctagtgag
      541 aagatggtgg tcctaccaaa aacaacgaat aacccaatgg atccccttca tgcatgcgag
      601 aaatgtttgt tgtgtgccct aaagaccacc tgcaatcagg ggagaccttc acaccatgcc
      661 tgggcgcctt tttcaccctt gtcatctgga gctgctttct gatttatctc tattttaccc
      721 ttgacgagat ggagtatgtc attccaacct agcctaacca cggagcccac cggcagctct
      781 ggttcatcat ctcctgactc ttatgagctg cacaacaggg tttctgccct cttaaacacc
      841 ctcccacccc ccacccctgc ccaggcttcc acctggagat taaagacttt tgtttaaaag
      901 aaaa
//
