LOCUS       XM_039083276             907 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus testis expressed 30 (Tex30),
            transcript variant X10, mRNA.
ACCESSION   XM_039083276
VERSION     XM_039083276.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039083276.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..907
                     /gene="Tex30"
                     /gene_synonym="RGD1309095"
                     /note="testis expressed 30; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 1 long SRA read, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 196
                     samples with support for all annotated introns"
                     /db_xref="GeneID:301381"
                     /db_xref="RGD:1309095"
     CDS             195..647
                     /gene="Tex30"
                     /gene_synonym="RGD1309095"
                     /codon_start=1
                     /product="testis-expressed protein 30 isoform X2"
                     /protein_id="XP_038939204.1"
                     /db_xref="GeneID:301381"
                     /db_xref="RGD:1309095"
                     /translation="MSHTENYLKTSGEYKLAGVFLGGRSMGSRAAASVMCHTELDDAD
                     DFVRGLICISYPLHHPKQQHKLRDEDLFRIKDPVLFVSGSADEMCEKNLLEKVAQKMQ
                     APSKIHWIEKANHSMAVKGRSTNDVFKEINTQILFWIQEITEMDKKCH"
ORIGIN      
        1 gtaagcgcgg cggcggcggc ggcggcggcg ggaagtggag cggcggtgcc gaaccaggtg
       61 ggcagctcct ccggggctgt cggtctccgc ctgaggcgtc tgtggaagct ctctgcggac
      121 gtggagcagc cgatgggaga tgccctttgc ttctcagatg taatgcacct tgtgtttatt
      181 attcaacagt gaaaatgagt cacacagaga attacctgaa gacctccgga gaatacaaac
      241 ttgcaggtgt ttttcttgga ggtcgttcaa tgggctcaag agcagctgct tctgtaatgt
      301 gtcatactga gctagacgat gccgatgatt ttgttcgagg tctcatttgt atttcttacc
      361 cactgcacca tccaaagcag cagcataaac tcagagatga agatctcttt cgcataaagg
      421 atcctgtact gtttgtgtca ggctcagcag atgaaatgtg tgaaaagaac ttgttggaga
      481 aagtagcaca gaaaatgcaa gcccccagta aaattcattg gattgagaag gcaaatcatt
      541 ctatggcagt gaaaggacgg tcaacaaatg atgtattcaa agaaataaac actcaaatct
      601 tgttttggat ccaagaaatc actgaaatgg acaagaaatg tcattaaaag ccatgttttg
      661 aataaaagta cggttggtta atttgataaa gtacacctct cagcattgtg agatgtattt
      721 cagactaatg ttctttaatg ttgccctatt tttgaaacat tgtatcgtga aaatatcctt
      781 tacaagatgt cttttgaaag cactgttaca gttatatgaa gataatgtac aaatattgaa
      841 ggttgtctat aatttatttt tattagtata gttaagtttt gaaaaattaa acatttgcat
      901 tttgtta
//
