LOCUS       NM_001191103            1230 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus testis expressed 28 (Tex28), mRNA.
ACCESSION   NM_001191103 XM_001073954
VERSION     NM_001191103.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000021.1.
            
            [WARNING] On Oct 26, 2024 this sequence was replaced by
            NM_001191103.2.
            
            On Jul 17, 2010 this sequence version replaced XM_001073954.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.33347.1,
                                           SRR26643293.33345.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-12                JAXUCZ010000021.1  157096950-157096961 c
            13-737              JAXUCZ010000021.1  157093038-157093762 c
            738-873             JAXUCZ010000021.1  157078252-157078387 c
            874-1230            JAXUCZ010000021.1  157077053-157077409 c
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq37"
     gene            1..1230
                     /gene="Tex28"
                     /note="testis expressed 28"
                     /db_xref="GeneID:690282"
                     /db_xref="RGD:1582832"
     CDS             1..1230
                     /gene="Tex28"
                     /note="testis expressed gene 28; testis-specific protein
                     TEX28-like"
                     /codon_start=1
                     /product="testis-specific protein TEX28"
                     /protein_id="NP_001178032.1"
                     /db_xref="GeneID:690282"
                     /db_xref="RGD:1582832"
                     /translation="MVLKVESTKSSSATFPPNVPSYRSLSSSHEDCPSSHTSFSDGEL
                     ARNVREGVKHRIFYLSEQLRVEKASRDENTMSYLKLISKADRHQAPHIRKAFERVNQR
                     TSATIAHIERKLYQCHQQLKELEEGCSPTSLVLNVDSGMDSHKQPGGKILYSKLSKPD
                     GEDSLPINVARSSTLESHLPGMQQRKFSDKKYVAQQQKLLLQKMKEELTEAKKVHASL
                     QLSHQNLKESHMIDVRRILESLQEKKTRQSLMEEHVNDHLQRYLDEICHLKQHLACTE
                     EKMAYLSYERAKEIWDVMETFKNRITKLETLQQATQLEMMASLRTRPKDFFFRFISLL
                     LTLTTILLVVVSTLCSCPLPLLNSRLRIFIVFMIIGLGTLAWQKRHVISIIDWQAWVP
                     FKWRSDLKDAKPPSARH"
     exon            1..12
                     /gene="Tex28"
                     /inference="alignment:Splign:2.1.0"
     exon            13..737
                     /gene="Tex28"
                     /inference="alignment:Splign:2.1.0"
     exon            738..873
                     /gene="Tex28"
                     /inference="alignment:Splign:2.1.0"
     exon            874..1230
                     /gene="Tex28"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggttttaa aggtggaaag taccaagagc tcaagtgcaa ccttcccccc caacgtgccc
       61 tcctacaggt ctctgtcttc ctcccatgag gattgcccta gcagtcacac tagcttctcg
      121 gatggcgagc ttgcccggaa tgtgagggaa ggtgtcaaac accgaatctt ctacctctca
      181 gagcagctga gagtggagaa ggccagtagg gatgaaaata ccatgagcta cctcaaactg
      241 atatccaaag ctgaccggca ccaggcccca cacatccgga aggcctttga aagggtgaac
      301 cagcgcacct ctgccactat tgctcacata gaacgaaaac tctatcagtg tcatcagcag
      361 ctgaaggagt tggaagaggg ctgcagtccc acaagcttag tgctgaatgt ggacagtggg
      421 atggacagcc ataagcagcc aggtgggaag attttatatt ccaagttgtc caagccagat
      481 ggggaagata gcctgcccat caacgttgct aggtcctcta ctctagagag tcacttgcca
      541 ggcatgcagc agaggaaatt ttcagacaaa aagtatgtgg cccagcaaca aaaactactt
      601 ttgcagaaga tgaaagaaga actgacagaa gccaagaagg ttcatgctag ccttcagctc
      661 tcccatcaaa acctcaagga aagtcatatg attgatgtgc ggaggatact ggagtcactc
      721 caggaaaaga aaaccagaca atcactgatg gaagaacatg tgaatgatca cttgcagaga
      781 tacctggatg agatttgcca cctcaaacag catctggcat gcactgaaga gaaaatggcc
      841 tatttgtcct atgaaagagc caaggaaata tgggatgtaa tggagacttt caagaacaga
      901 ataacaaagc tagaaactct acagcaagct acccaactgg agatgatggc cagcctcaga
      961 acccgcccca aggacttttt cttcagattc ataagcctgc ttctcactct gaccactatc
     1021 ctcttggtcg tggtctctac attgtgttct tgccctttgc ccttgctcaa ctcacgcctg
     1081 cgcatcttca ttgtatttat gatcattggg cttgggacct tggcctggca gaagcggcat
     1141 gtcatctcta ttattgactg gcaggcctgg gtccccttta agtggagatc agacttaaag
     1201 gatgctaaac ctccatcagc tagacactga
//
