LOCUS       XM_003750240            1173 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus testis expressed 22 (Tex22), mRNA.
ACCESSION   XM_003750240
VERSION     XM_003750240.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003750240.6.
            
            On Jan 21, 2021 this sequence version replaced XM_003750240.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-353               JACYVU010000169.1  4003124-4003476
            354-546             JACYVU010000169.1  4003862-4004054
            547-894             JACYVU010000169.1  4016457-4016804
            895-1173            JACYVU010000169.1  4016806-4017084
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1173
                     /gene="Tex22"
                     /note="testis expressed 22; The sequence of the model
                     RefSeq transcript was modified relative to its source
                     genomic sequence to represent the inferred CDS: deleted 1
                     base in 1 codon; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 6 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:691636"
                     /db_xref="RGD:1597257"
     CDS             391..939
                     /gene="Tex22"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: testis-expressed protein
                     22"
                     /protein_id="XP_003750288.3"
                     /db_xref="GeneID:691636"
                     /db_xref="RGD:1597257"
                     /translation="MDSRQQRPQRKTLQWQLAQEQRQQSPQQGLSAASSQPDTKSKPP
                     EDLQTQDWVCEPQEHRRPGTSWNVSIDERRHLAMLRMEERTNPARDPFRNVLGLHLED
                     QQTEPSPPTQPVPDLSFQAGENVVRDITQLVAEMMSEGIERDVLLPHPLRPTEYSNAL
                     QDFLARNAPLWKNENSSRLPHP"
ORIGIN      
        1 agagttctgt ccctggatcc agctcagctt tctcagtccg gtgctggagg ttctacgaag
       61 tcagccgcaa cctggtttac ctagacccaa atgagcattc acaggccacg cgaccctcca
      121 ctcccggtgc agacccttct aagcttggtc tcgccagctg atccattgtt aaccggagtt
      181 tattaagccc acctcatctg tcccgagttt acctagccct taccggaacc ttctgggcga
      241 gctctgcctc cgcgtgggag cgggtgaccc aactccccac atctcttcac tgctgccctt
      301 caactgactt ccacagttca gacccttgga gagggtggga gatgagagct cagccctaga
      361 tgtgggaact gcaacctgct gtatgtagag atggacagca gacagcagcg cccccagagg
      421 aagacgctac agtggcagct tgctcaagag caaaggcaac agtctcccca gcaggggctt
      481 tcagcagcct ccagccagcc agacaccaag agcaagcctc cggaggacct gcagacccaa
      541 gactgggtgt gtgagcctca ggagcacagg cgcccaggta cctcctggaa tgtcagcatc
      601 gatgagcgca ggcatctggc catgctgcgt atggaggaga ggacaaaccc agccagggac
      661 ccattcagaa atgtgctggg cctgcatctg gaggaccagc agactgagcc ctccccaccg
      721 acccagcctg tcccagacct ttccttccag gccggtgaaa atgtggtgag ggacatcaca
      781 cagctggtgg cagagatgat gtccgagggt atagagagag acgtactcct ccctcacccc
      841 cttagaccta cagagtactc caacgcctta caggacttct tggcccggaa tgcgcccctt
      901 tggaagaatg agaattcttc aaggttgccc cacccctaag aaggatctcg gcttagccct
      961 gcgttatgtt gtccggtgtc tttctttctg gtggggcata gctttggcac gccctgtgct
     1021 ctctctgtgt ctcactgtgg tcttgaccca ccctcagaga gcaaacaagt cagggcaaag
     1081 gtctcaggac tcaggcaagc accacttcct aggaggccgg ttggaaacta tgggagagcc
     1141 atgcaaggga gagagtcagg gaagaccttc caa
//
