LOCUS       NM_001100554            4762 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus testis expressed 2 (Tex2), mRNA.
ACCESSION   NM_001100554 XM_006247645
VERSION     NM_001100554.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4762)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Apr 21, 2023 this sequence version replaced XM_006247645.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.66984.1,
                                           SRR26643284.14411.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-104               JAXUCZ010000010.1  92045841-92045944   c
            105-1755            JAXUCZ010000010.1  91997147-91998797   c
            1756-1956           JAXUCZ010000010.1  91979738-91979938   c
            1957-2296           JAXUCZ010000010.1  91977709-91978048   c
            2297-2544           JAXUCZ010000010.1  91975100-91975347   c
            2545-2691           JAXUCZ010000010.1  91966554-91966700   c
            2692-2791           JAXUCZ010000010.1  91962353-91962452   c
            2792-2924           JAXUCZ010000010.1  91953350-91953482   c
            2925-3050           JAXUCZ010000010.1  91947115-91947240   c
            3051-3260           JAXUCZ010000010.1  91945311-91945520   c
            3261-3381           JAXUCZ010000010.1  91940248-91940368   c
            3382-4762           JAXUCZ010000010.1  91936390-91937770   c
FEATURES             Location/Qualifiers
     source          1..4762
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..4762
                     /gene="Tex2"
                     /note="testis expressed 2"
                     /db_xref="GeneID:303611"
                     /db_xref="RGD:1305112"
     exon            1..104
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
     exon            105..1755
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..3498
                     /gene="Tex2"
                     /note="testis expressed gene 2; testis-expressed sequence
                     2 protein"
                     /codon_start=1
                     /product="testis-expressed protein 2"
                     /protein_id="NP_001094024.1"
                     /db_xref="GeneID:303611"
                     /db_xref="RGD:1305112"
                     /translation="MTSLNGRHAEKTIDMPKPSAPKVHVQRSVSRDTIAIHFSASGEE
                     EEEEEEELRGYLEEGLDDQSIVTGLEAKEDLYLEPQGGHDPAGPAVATAPADGLSVSE
                     TPAILPVSENTVKLLEPPAPAVQVLSPVPLALSPGSSSSGPLASSPSVSSLSEQKTSS
                     SSPLSSPSKSPVLSSSASSSALSSAKPFMSLVKSLSTEVEPKESPHPPRHRHLMKTLV
                     KSLSTDTSRQESDSVSYKAPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPSDTRS
                     FFKVPEMEAKIEDTKRRLSEVIYEPFQLLSKIMGEESGSHRPKALSSSASELSNLSSL
                     NGHLESNNYSIKEEEGDSEGDDYGSDSNTPRTDHLKPSEDASKEGEPKGSQASSLKTS
                     SLVLEKCSLSALVSKEDEEFCELYTEDFELEAEGEGRLDKPPDIPLKPEVPASEGVAL
                     DSEDEEDPGSEHPELPVKTLSFFILCVYAYLILPLPYYMSGLFLGLGLGFMTAVCMIW
                     FFTPPSAHKYHRSHKALRHRNSRSLDIREPEILKGWMNEIYSYDPETYHATLTHSVFV
                     RLEGGTLRLSKPNKNISRRASYNETKPEVTYISQKIYDLSDSKIYLVPKSLARKRIWN
                     KKYPICIELGRQDDFMSKAQTDKEAGEEKLPPERELASEDLKKPPQPQEGTKSSQRDP
                     ILYLFGRTGREKEEWFRRFTLASKLKSDLKKSSGVSGSKSGLLPAHSRHSSPSGHLSH
                     SRSSSKGSMEEMMPQPKQKELLGGVRQKMLLDYSVYMGRCVPQDGQSPHRSPVQSAES
                     SPTAGKKLPEAPPSEEEEQEAWVNALLGRIFWDFLGEKYWSDVVSKKIQMKLSKIKLP
                     YFMNELTLTELDMGVAVPKILQAFKPYVDHQGLWIDLEMSYNGSFLMTLETKMNLTKL
                     GKEPLVEALKVGEIGKEGCRPRAYCLADSDEESSSAGSSEEDDPPEPSAGDKQPLPGA
                     EGYVGGHRTSKIMRFVDKITKSKYFQKATETEFIKKKMEEVSNTPLLLTVEVQECRGT
                     LAVNIPPPPTDRMWYGFRKPPYVELKARPKLGEREVTLVHVTEWIEKKLEQELQKVFV
                     MPNMDDVYIPIMHSAMDPRSTSCLLKEPPVEASD"
     exon            1756..1956
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
     exon            1957..2296
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
     exon            2297..2544
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
     exon            2545..2691
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
     exon            2692..2791
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
     exon            2792..2924
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
     exon            2925..3050
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
     exon            3051..3260
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
     exon            3261..3381
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
     exon            3382..4762
                     /gene="Tex2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agctgcacgg cggccccagc cagagccgga gctggagctg gagccgcggc ggccgcggag
       61 aacgggcgcc ggcgcagtag gatgaggcag ccagcggatc caggagcctg agcccttgcg
      121 aagccggcaa tgacaagtct gaatggtcgc catgccgaga aaaccattga catgccaaaa
      181 ccatcagccc ccaaagtgca cgtgcaaagg tctgtgtccc gagataccat cgccatccac
      241 ttctcggcat ccggggagga ggaggaggaa gaggaggagg agctcagggg ctacttggag
      301 gaggggctag atgaccaaag cattgtaaca gggcttgaag ccaaggagga cctgtatctt
      361 gaaccccagg gtggccatga ccctgcaggc cctgctgtgg cgacggcccc tgcagatggc
      421 ctgtctgtgt ctgagacacc cgccattttg cctgtctctg agaacactgt aaagttgctg
      481 gagccccccg ctccagcagt gcaggtatta agtccagtgc cactggctct gtctccaggg
      541 tcatcttcat ctggaccgtt agctagttct cccagtgtgt cctccctttc tgagcagaaa
      601 accagttctt cgtccccact gtcttctcct tccaagtctc ctgtcctatc atccagtgcc
      661 tcgtcctccg ccctctccag cgcaaagccc ttcatgagcc tggtgaagtc cctgtcaacc
      721 gaggtggagc caaaagaatc cccccacccc ccacggcaca ggcacttgat gaagactctg
      781 gtcaagtctc tgtccacgga cacctcccgg caggagtcgg actctgtgtc ctataaagcc
      841 cctgactcca agctcaacct gcacctgttc aaacagttca cacagccacg gaacacgggc
      901 ggagactcca agactgcgcc ttcttccccc ctgacttctc cctctgacac tcgctccttt
      961 tttaaagtgc ccgaaatgga ggcaaaaatc gaagacacta agcgacgcct gtcagaagtc
     1021 atctatgagc ccttccagct cctcagcaag atcatggggg aggaaagcgg cagccacagg
     1081 cccaaagcct tatcttcaag tgcttcagaa ctctctaacc tgtccagctt gaacgggcac
     1141 ttggaaagca ataactacag catcaaggag gaggaggggg actctgaggg ggacgactac
     1201 ggcagcgact ccaacacccc caggaccgac cacctgaagc ccagcgagga cgcctcgaag
     1261 gaaggggagc ccaagggttc ccaggcaagc agtctgaaga caagctctct ggttcttgag
     1321 aaatgttctc tgtctgcctt agtgagcaag gaagatgaag agttctgtga gctgtatact
     1381 gaggacttcg agctggaggc tgagggcgag gggagacttg ataagcctcc tgatatcccc
     1441 ctcaagccag aggtgcctgc cagtgagggc gtggctctgg acagcgagga tgaagaggac
     1501 ccaggcagtg agcaccccga gttacctgtg aagacactca gcttctttat cctgtgtgtc
     1561 tacgcgtacc tcatcctccc cctcccctac tacatgagcg ggctcttcct gggcctcggc
     1621 ctcgggttca tgactgcagt ttgcatgatt tggttcttta caccgccaag tgctcataaa
     1681 taccacagat cccacaaagc tctgcggcac cggaactcga gatccctgga catcagggag
     1741 cctgaaatac tgaagggatg gatgaatgag atttacagct atgatccaga aacctaccat
     1801 gcgactttga cacactcagt ctttgtccgg cttgagggtg gaaccttaag actttcaaag
     1861 cccaacaaaa acatatccag gagggcgagc tacaatgaga caaagccaga ggtcacctac
     1921 atcagccaga aaatctatga cctctcagac agcaagattt atcttgtacc taaaagcttg
     1981 gctcgaaagc gaatctggaa taaaaagtac cccatttgta tcgagctcgg tcggcaagat
     2041 gactttatgt ctaaggcgca gaccgataag gaagctggtg aggagaagct gcctcctgag
     2101 agagagctgg cgagtgagga ccttaagaag ccaccccagc ctcaagaggg gacaaagtct
     2161 agccagcgag acccgatcct gtatctgttt gggagaactg gccgagaaaa agaggagtgg
     2221 ttcaggaggt ttaccctggc atctaagctg aagtcagacc tcaagaagtc gtctggggtt
     2281 tctggaagta aatcagggct tttgcccgcc cacagcagac acagcagtcc ctcggggcac
     2341 ctgagccaca gccgcagcag cagcaaaggc agcatggagg agatgatgcc ccagccgaag
     2401 cagaaggagc tgctgggcgg cgtgcggcag aagatgcttc ttgactacag tgtgtacatg
     2461 ggcaggtgtg tgccccagga cggccagagc ccccacagga gccctgtgca aagtgcagag
     2521 agcagcccca cggctgggaa gaagttgcca gaggccccac cctctgagga ggaagaacag
     2581 gaagcctggg tgaatgcctt gcttggaaga atattttggg acttcttggg tgagaaatac
     2641 tggtctgatg tggtgtcgaa gaaaatccag atgaaactca gcaaaattaa gctcccctac
     2701 tttatgaatg aactaacact gacagagctt gacatgggtg tggctgtgcc aaaaatcctt
     2761 caggccttca agccttatgt tgatcaccaa ggactctgga tcgatttgga aatgtcttac
     2821 aatgggtcct ttctgatgac tctcgagacc aaaatgaact tgaccaaact aggtaaagag
     2881 cctcttgttg aagccctgaa ggttggagaa attggcaaag aaggttgcag gcccagggca
     2941 tactgtttgg ctgacagtga tgaagaatcc tccagtgccg gttcctctga ggaagatgat
     3001 ccaccagaac ccagcgctgg agacaaacag ccactccctg gggctgaagg gtatgttgga
     3061 ggtcatcgaa caagtaagat tatgaggttt gttgataaga tcaccaaatc gaaatatttc
     3121 caaaaggcga cagagacaga attcattaaa aagaagatgg aggaagtctc taatacgcca
     3181 ctgctgctaa ctgtggaagt gcaggagtgt cgcgggacct tggcggtcaa catccctccg
     3241 cccccaactg accggatgtg gtatggtttc cggaagccac catatgtgga gctgaaagct
     3301 cggccaaaac ttggagagag agaagtaact ttagttcacg tgacagagtg gatagagaag
     3361 aaactggagc aggagcttca gaaagtcttt gtcatgccaa acatggatga tgtttatatc
     3421 cccataatgc actcggccat ggaccctcgc tccacttcct gcctcttgaa agagccacct
     3481 gtggaggcct ccgactagct gtgattgatg aagacgggac attcccagta ttatgagacc
     3541 cagctcaagg tgtgggattt gtggctgcca tctgtgctgt gggggtagcc tttactggtg
     3601 ccacagccac tgtctctaaa aggactgctt ctgccctctg cctgctggcc cattccactg
     3661 aggtctcatt ccctgcatct ggtgactagt acctggtttc tgttgcaaag ctttgactgg
     3721 caaaggagac ctgaactgtc atggtagagc tggagttaga gctgacccac accatggtct
     3781 acccggtcct atggcagcag acgagcacat tcagagcaaa gctcacaact tacggcttcc
     3841 cgtggctcct ccaaagctct ccctcaggca gccggtgcac aacagaccat ttttccactc
     3901 tacactttgt acgcatgact gcagccctcc acacttgcag aatgtcacta tagtgacctg
     3961 tgtggagtgt ggttttgtga gccatttcat tggtggtaaa ataggcatag caactttttt
     4021 catattaaat cgtgcatttt ggaagcaagt agccatagaa cacacaccca cactttcacc
     4081 aggggtgggg acagtgggct tcatgtgaac atcaggcaaa gccatgagat caaactatcc
     4141 caaaggtaca atcaccttgc tttccaacta atcctgactt ttctagagac atgagcgtat
     4201 gtgacaatgt caaaacactg cacacaatga ctgattgtcc ctcccgggta atgatggggc
     4261 agggccagaa agctggagct tgttgttctt ttctggtttt cctgtgtgct gtaggatgat
     4321 gggagggtct tgttaaccct aactggtttg ggaggtttct aggcagtccc cttctctgat
     4381 ggccaaatgg acgtcacttt ctctactcag tggcaagcac tacatctaca catgcacttg
     4441 tgacctttct ttaatgttgc caacttaagt ttgcatttgt gtcagaatgt ttagtttaca
     4501 aatttggggg ctctaattgt ataatttgct ttgagaagac ctaggtgttt tctttctttc
     4561 ttttttttgt ttaaagctgc atccaatgtc aaaattactt tgggtagctt ctgagattta
     4621 atatctgtgg acaaagctaa gtttttttct taaacagcac cttgcttgaa gatgacttta
     4681 aagaaattaa tatattgaaa acttatttga gcctttattt taatcatccc attaaaacat
     4741 gacaaattat ttgaccattc ca
//
