LOCUS       XM_017602359            2621 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus testis expressed 13B (Tex13b),
            transcript variant X1, mRNA.
ACCESSION   XM_017602359
VERSION     XM_017602359.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017602359.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2621
                     /gene="Tex13b"
                     /note="testis expressed 13B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 7 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:680865"
                     /db_xref="RGD:1587018"
     CDS             8..1438
                     /gene="Tex13b"
                     /codon_start=1
                     /product="testis-expressed protein 13B isoform X1"
                     /protein_id="XP_017457848.1"
                     /db_xref="GeneID:680865"
                     /db_xref="RGD:1587018"
                     /translation="MHPPASLVSWNSPKAKVARFSTRLCPPTSFSFFWVLSQVQGKWS
                     SVSLALVLQTGLIIGPAKPLRHSATMNPDDSTSGFRHAKVVMFINEQMSKNSKGPEFY
                     LENLSLSWEVVEEKLKVLLESSEVPREVQEACAWGSLALGIRFAFKQAQLQGRRVQWL
                     HDFASLHRSAAQGLTSDLKKLTEQQEMERKEAAYQLQLAHTKLAEVQRDRDLMRLKLL
                     HAELRAVPVAQMPIMTSAPAVAVSPAAAVAAAAAAAAAAAVAAAAAAATGAQTGPEIQ
                     NAGEKEAVTASRTAECIPEKEMDGVIAMAAPRASTVALEGSTPEQLSPVEKKTYPLEV
                     EGQEEGGGKSMETPKSSASKQMGLRSSASAQPVNIQLPVSFTYSYESPFPVTPTPSPP
                     PSTVTEPQMPPYFMATDMNMSETEGPTVYLQDPPKDSYESRPLQQRKTFCIPGDWDCP
                     WCKSVNLSKKDSCFRCGRQGWLSNSQ"
ORIGIN      
        1 ctcatacatg catccccctg ccagtcttgt aagttggaac agtccaaaag caaaagtcgc
       61 gagattttca acgagacttt gccctcccac gtccttttcc tttttttggg tgctgtcgca
      121 ggtgcaaggc aagtggtctt ctgtctctct cgcccttgtt ttgcagactg gtcttataat
      181 agggccagca aagcccctaa ggcactcagc caccatgaat cccgatgatt ccactagtgg
      241 gttccggcat gccaaggtgg taatgttcat caatgagcaa atgtccaaga actccaaagg
      301 ccccgagttc taccttgaga acctgtccct gtcctgggag gtggtggaag aaaagctcaa
      361 agtcctcctg gagagtagcg aggtacctcg cgaagttcag gaagcctgtg cctggggcag
      421 tctggccttg ggtattcgct ttgcttttaa acaagcccag ttgcaggggc gcagagtgca
      481 gtggctgcat gacttcgcca gcctgcacag gtcggcagca caaggcttga catcagatct
      541 gaagaagctc accgagcagc aagaaatgga acgcaaggag gcagcctacc agctccagtt
      601 ggcccacacc aaactagcag aggtgcagag agatcgcgac ttgatgagac tgaagctact
      661 acatgcagag ctgagggctg ttcccgttgc acagatgcca atcatgacta gtgcccctgc
      721 tgttgctgtt tctcctgctg ctgctgttgc tgccgccgca gctgcggctg cggctgcggc
      781 tgtagccgcg gccgcggctg cggctacagg ggcacagaca gggccagaga tacaaaatgc
      841 aggagagaaa gaagcggtga cagctagtcg tacggcagag tgtataccag aaaaggagat
      901 ggatggggtt atagccatgg ctgcccctag ggcatccaca gtagcactgg aaggaagcac
      961 cccggagcag ctttcgcctg tggaaaagaa aacttatccc ctggaagtgg aggggcagga
     1021 ggagggggga ggcaaatcta tggaaacacc caaaagttct gcctctaagc aaatgggtct
     1081 caggtcctca gcctccgcac aaccggttaa tatccaactc cctgtctcct ttacatattc
     1141 atatgaaagc cccttcccag tcacacccac cccatcccca ccaccaagca cagtcacaga
     1201 acctcagatg ccgccctact tcatggccac tgacatgaat atgtccgaaa ccgagggccc
     1261 aactgtgtac ctccaagatc cccctaaaga cagttatgag agcagaccct tgcagcagag
     1321 aaaaacattt tgcatacctg gggattggga ttgcccttgg tgtaaatctg tgaatctttc
     1381 gaagaaggat tcttgcttcc gttgtgggag gcaaggctgg ctatccaact ctcagtgagg
     1441 tttttttttt ttttaagtag tacagaatag aaatctccca aatgggaagt taattttcag
     1501 aggtaggaaa aggaaaatgg gaggggggtt catgggaatg ggagggaagt aatgggatag
     1561 gtacagttgg tatgggaggg gcaagttttg ataatttctt ttgtattcca gattgtttgc
     1621 attcgatacc cttgaactgc ttcatgcggg gggggggggt gtttgggtgt gcatatgtat
     1681 acccctcctg gtacagctaa atatgcaata ccccaccctt ttcacaaacc tagactttaa
     1741 aagatagagc tatagtggtt attcaaccca ttctgagaca aaaaatttca ggctggtgga
     1801 cctaaacaga gaatcagctg actgatagag tcagtggatc actggaagca gcccattcct
     1861 ggtcctggct aaggtaggga acagaatcgg ctgttttcca gacattttta gactaatcct
     1921 agtaggagac tccagggagc tgacagacac aaggagacac aaaggaattg atcaactggc
     1981 ttcagagaac tcagctacgt tttatacctc tgcagctgtg ttacataaag ttcccttttt
     2041 acctaggcca cttctttgta atttcagaag ttttgagcaa ctagatcatt ctcatatcag
     2101 ctaacttttc ttttatatct tgattttttt atttttttta aacaagggct catatggccc
     2161 agattggcct caaattcatc atgtggctgt tgccagatcc tcctgcctcc actccctaag
     2221 tgttggaatt gacaggggag ttgaacaagt ggagagcaaa cagtggcgac tcctttctgc
     2281 caaggccccg agaataaact ggataggaca cttaggttca gtgggattct attggcagaa
     2341 atagctcaaa cctagggtga ctgttcccat gagtgaacgg cataggaggc ttgaaatttg
     2401 acagagtaat atcacaagaa attaaatgag acctgggata aattaacctc aggtttatgg
     2461 ttgactcaaa ttaacatgac agaaatttgc cacccctatg agaatcctga gagactacag
     2521 aggatgccag caccaggtac aagcaaggac gtccacgagt atccagcctc ttaacaggac
     2581 tcttccccag ccccagtggg cagaacagat ctgaacagga a
//
