LOCUS       NM_001014224            1768 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus tektin 5 (Tekt5), mRNA.
ACCESSION   NM_001014224 XM_343857
VERSION     NM_001014224.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Cao,W., Ijiri,T.W., Huang,A.P. and Gerton,G.L.
  TITLE     Characterization of a novel tektin member, TEKT5, in mouse sperm
  JOURNAL   J Androl 32 (1), 55-69 (2011)
   PUBMED   20378928
REFERENCE   3  (bases 1 to 1768)
  AUTHORS   Murayama,E., Yamamoto,E., Kaneko,T., Shibata,Y., Inai,T. and
            Iida,H.
  TITLE     Tektin5, a new Tektin family member, is a component of the middle
            piece of flagella in rat spermatozoa
  JOURNAL   Mol Reprod Dev 75 (4), 650-658 (2008)
   PUBMED   17924527
  REMARK    GeneRIF: Tektin5 was located in the middle piece of flagella in rat
            spermatozoa with no immunolabeling in the heads and the principal
            piece. it might work as a middle piece component requisite for
            flagellar stability and sperm motility.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1, AB294402.1 and BC079040.1.
            
            On Mar 11, 2021 this sequence version replaced NM_001014224.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079040.1, SRR26643293.61362.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-37                JAXUCZ010000010.1  5786656-5786692
            38-1714             AB294402.1         1-1677
            1715-1768           BC079040.1         1750-1803
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q11"
     gene            1..1768
                     /gene="Tekt5"
                     /gene_synonym="RGD1307081; Tek5; Tektin5"
                     /note="tektin 5"
                     /db_xref="GeneID:363538"
                     /db_xref="RGD:1307081"
     exon            1..604
                     /gene="Tekt5"
                     /gene_synonym="RGD1307081; Tek5; Tektin5"
                     /inference="alignment:Splign:2.1.0"
     CDS             38..1714
                     /gene="Tekt5"
                     /gene_synonym="RGD1307081; Tek5; Tektin5"
                     /codon_start=1
                     /product="tektin-5"
                     /protein_id="NP_001014246.1"
                     /db_xref="GeneID:363538"
                     /db_xref="RGD:1307081"
                     /translation="MEFLGTTQTASYCGPKKVCGLQALPPAGQDPVVQECYQPFHLPG
                     YRYLNAWRPSVFYKITTQQTCPEECSSSRRPPTILPSLRSALFCRYTQRDWDRSNDLQ
                     LRGAEASRLWAGRLTGDSLRIMQDKDQLIHQMQEGTSRNLNQRVCDIGFWKSELCYEL
                     DRLLTESNSMDTLKRRLECAAEEMNNPLQVALECLYNREKRIGIDLVHDNVEKNLIRE
                     VDLLKCCQDQMRKLAKRIDFQIRDNRDAQHALERDIEDKSSSQYIDESCFNLRNTSDS
                     ISFFHGMEKFDGTVSIPETWAKFSNDNIRHTQNMRANSIRLREEAEHLFETLSDQLWR
                     QFTNTNLAFNARISEETDVKNKLQTQLAKILQEIFQAENTIMLLERAIVAKECPLKVA
                     QTRLACRTRRPNVELCRDVSQFRLVNEVFTIDDTLQTLKLRLRETQDALQLLVMTKSR
                     LEHELAIKANTLCIDKEKCMRMRKSFPSTPRLTGYTCSGIGSGPYTNQVPRVSSCGGG
                     ASCGGGLSCGGGVACGGGASCGGSAPCGGSALCSHPVSGSCPGSCFAPVC"
     exon            605..688
                     /gene="Tekt5"
                     /gene_synonym="RGD1307081; Tek5; Tektin5"
                     /inference="alignment:Splign:2.1.0"
     exon            689..759
                     /gene="Tekt5"
                     /gene_synonym="RGD1307081; Tek5; Tektin5"
                     /inference="alignment:Splign:2.1.0"
     exon            760..903
                     /gene="Tekt5"
                     /gene_synonym="RGD1307081; Tek5; Tektin5"
                     /inference="alignment:Splign:2.1.0"
     exon            904..1126
                     /gene="Tekt5"
                     /gene_synonym="RGD1307081; Tek5; Tektin5"
                     /inference="alignment:Splign:2.1.0"
     exon            1127..1281
                     /gene="Tekt5"
                     /gene_synonym="RGD1307081; Tek5; Tektin5"
                     /inference="alignment:Splign:2.1.0"
     exon            1282..1768
                     /gene="Tekt5"
                     /gene_synonym="RGD1307081; Tek5; Tektin5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggcaaagtt ttgcccacgt ggggctgatg gggaaagatg gaatttcttg gaaccactca
       61 gacagcgagt tactgtggtc ccaagaaagt ctgtggcttg caggcgctgc cccctgctgg
      121 gcaggaccct gtggtacagg agtgctacca accctttcac ctgcctggat atcgctacct
      181 gaacgcgtgg agaccgagcg tcttctacaa gatcaccacc cagcagacat gcccagagga
      241 atgctcaagc agccgacggc cgcctaccat cctgccctcg ctccgctccg cgctcttctg
      301 tcgctacacc caacgcgact gggaccgctc caatgatctg cagctcagag gtgcagaggc
      361 ctcgcggcta tgggccggcc gactgacagg cgactccctg cgaatcatgc aggataagga
      421 ccagctgata caccagatgc aggagggaac ctcccggaac ctgaaccaga gggtatgcga
      481 catcggcttc tggaagtccg agttgtgcta tgagctggac aggcttctga cggagagcaa
      541 cagcatggac accctcaaga ggcgcttgga gtgcgccgct gaggagatga acaatcccct
      601 gcaggtggcc ctggagtgtc tgtacaatcg tgagaaaagg attgggattg acctggtcca
      661 tgacaacgtg gagaaaaacc ttattcggga agtagattta ctaaaatgtt gccaggatca
      721 gatgagaaaa ttagctaaaa gaattgattt ccagattaga gataatcggg acgctcaaca
      781 tgccctagag cgggacatcg aggacaagag ctcctcacag tatattgatg agagttgttt
      841 taacctgaga aacacatccg actccattag cttcttccac ggcatggaga agtttgacgg
      901 aacagtctct attcccgaaa cctgggccaa gttcagcaat gacaacatca gacacactca
      961 gaacatgcgg gccaactcca tccggctgcg ggaggaggcg gagcacctgt ttgagacctt
     1021 gtcggaccag ctgtggagac agttcaccaa caccaacctg gccttcaacg ctcgcatctc
     1081 tgaggagaca gatgtgaaga acaagctgca gacacagctg gctaagatac tgcaggagat
     1141 cttccaggca gagaatacca tcatgttgct ggagagggcc attgtggcca aggaatgccc
     1201 actgaaggtg gctcagacca ggctagcatg caggacccga cggcccaacg tggagctctg
     1261 cagggatgtg tcacagttca ggctcgtgaa tgaggtcttc accatagacg acactctaca
     1321 gacgctcaaa ctgaggcttc gggagacgca agatgcgttg cagctgctgg tgatgaccaa
     1381 gtctcggttg gagcacgagc tggccatcaa agccaacacc ttgtgtattg acaaggagaa
     1441 gtgcatgcgc atgcgcaaat ccttccccag cacgccccgc ctgactggct acacctgctc
     1501 tggcataggc tcaggccctt ataccaacca agtccctcgt gtcagctctt gcgggggcgg
     1561 ggcctcttgt ggaggtggac tctcttgcgg aggcggagtc gcttgcggag gcggggcctc
     1621 ttgcgggggt tctgcccctt gtggcggctc tgcgctctgt tcccaccctg tgtctggttc
     1681 ctgccctggt tcctgctttg caccggtgtg ttaaatggca taatgctgga aaaggctgaa
     1741 aagaaaataa aagagtcgtt ttctcccc
//
