LOCUS       NM_001106200            2749 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus tectorin beta (Tectb), mRNA.
ACCESSION   NM_001106200 XM_001062996 XM_217644
VERSION     NM_001106200.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2749)
  AUTHORS   Legan PK, Rau A, Keen JN and Richardson GP.
  TITLE     The mouse tectorins. Modular matrix proteins of the inner ear
            homologous to components of the sperm-egg adhesion system
  JOURNAL   J Biol Chem 272 (13), 8791-8801 (1997)
   PUBMED   9079715
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473986.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_217644.4, XM_001062996.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN16676784,
                              SAMN16676787 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q55"
     gene            1..2749
                     /gene="Tectb"
                     /note="tectorin beta"
                     /db_xref="GeneID:292124"
                     /db_xref="RGD:1305835"
     exon            1..205
                     /gene="Tectb"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..1119
                     /gene="Tectb"
                     /note="beta-tectorin"
                     /codon_start=1
                     /product="beta-tectorin precursor"
                     /protein_id="NP_001099670.1"
                     /db_xref="GeneID:292124"
                     /db_xref="RGD:1305835"
                     /translation="MVARAFVLLALFAEASAKSCTPNKADVILVFCYPKTIITKIPEC
                     PYGWEVHQLALGGLCYNGVHEGGYYQFVIPDLSPKNKSYCGTQSEYKPPIYHFYSHIV
                     SNDSTVIVKNQPVNYSFSCTYHSTYLVNQAAFDQRVATVHVKNGSMGTFESQLSLNFY
                     TNAKFSTKKEAPFVLETSEIGSDLFAGVEAKGLSVRFKVVLNSCWATPSADFMYPLQW
                     QLINKGCSTDETVLVHENGKDHRATFQFNAFRFQNIPKLSKVWLHCETFICDSEKLSC
                     PVNCDKRKRMLRDQTGGVLVVELSLRSRGFSGLCDFSDVLLHLVLMLGTWAVL"
     exon            206..396
                     /gene="Tectb"
                     /inference="alignment:Splign:2.1.0"
     exon            397..539
                     /gene="Tectb"
                     /inference="alignment:Splign:2.1.0"
     exon            540..612
                     /gene="Tectb"
                     /inference="alignment:Splign:2.1.0"
     exon            613..716
                     /gene="Tectb"
                     /inference="alignment:Splign:2.1.0"
     exon            717..800
                     /gene="Tectb"
                     /inference="alignment:Splign:2.1.0"
     exon            801..963
                     /gene="Tectb"
                     /inference="alignment:Splign:2.1.0"
     exon            964..1036
                     /gene="Tectb"
                     /inference="alignment:Splign:2.1.0"
     exon            1037..1069
                     /gene="Tectb"
                     /inference="alignment:Splign:2.1.0"
     exon            1070..2749
                     /gene="Tectb"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcttaccttg actttaactc ttctttcata tttccgatac agaaccattg aggcccgggg
       61 cctggaagga aggtgagcat ttggcccatt cggtttgggc acctggcaga gatcagctca
      121 agaggaacca tggtggccag ggccttcgtt ctgctggccc tctttgcgga agcttcggcg
      181 aaatcatgca ctccgaataa agcagatgtc atccttgtgt tttgttaccc caagaccatc
      241 atcactaaaa tccccgagtg tccctacgga tgggaagtac accagctggc cctcggggga
      301 ctgtgttaca atggggtcca tgaaggtggc tactaccaat tcgtcatccc agatctgtca
      361 cccaagaaca agtcctactg tggaacccag tcagagtaca agcctcccat ctaccacttc
      421 tatagccaca tcgtgtccaa tgacagcacc gtgattgtga agaaccagcc tgtcaactac
      481 tccttctcct gcacctacca ctccacctac ttggtgaacc aggctgcctt tgaccagaga
      541 gtggccactg ttcatgtcaa gaacgggagc atgggcacat ttgaaagcca gttgtccctc
      601 aacttctaca ctaatgccaa gttttccacc aagaaagaag ctcccttcgt cctggaaaca
      661 tctgaaatcg gttcggatct gtttgcagga gtagaagcca agggactaag tgttcggttt
      721 aaagtagtct tgaatagctg ttgggccacc ccctcggctg acttcatgta ccccttgcaa
      781 tggcagctga tcaataaggg ttgctccact gatgaaaccg tcctcgtgca cgagaatggc
      841 aaggaccaca gggccacttt ccaattcaat gccttccggt tccagaacat ccccaaacta
      901 tccaaggttt ggttacactg tgagacgttc atctgcgaca gtgagaagct ctcctgccca
      961 gtgaactgtg acaaacggaa acgcatgcta cgtgaccaga cagggggtgt cctggttgtg
     1021 gagctgtccc tacggagcag agggttttcc ggtctctgtg acttctcaga tgttcttctc
     1081 cacctcgtcc tgatgctggg gacctgggcc gtgttgtagg aggtagctgg cagctgcagc
     1141 agctctctcc acggccaccc tgaactgtga cagatttgtt tattgtgctg ccagaaagaa
     1201 cagacagaag actgcattgc tggggagcca ggagctgccc tttgccaaat atgtgtccca
     1261 tgatgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgaattt
     1321 ggtgatccac tgccttggag tcatacttcc tgtggcagtt agatcctgat aatcttctcc
     1381 aagaagctgg gcaggagcct cctctcctcc gctcaaatta gagcagcact tgaaagctac
     1441 cttccttata aaagacactc ccatcacacg cagcttagca tttggagaca gggacagacc
     1501 atcaccacaa aaatcaatgt caaatacaga atccacggga atagccagct tttatccagc
     1561 aggcactctg tcactgcatt ctaaggatca gcatggaccc cctaggcagg aggtcccagt
     1621 cttcaaacca caatgtggaa atccaagtta aacacaatac atttgctcaa acttctgtaa
     1681 tggatgagaa gcaggttctt gagagccagc tgctagtact agtctgcttt tattataggg
     1741 tttcttaaat cgatataatc attaggttgg tgtaaatgcc ttgtccttat gagtgatcat
     1801 atttttttag tcacaaataa ataggaaaca gacaatgaac aaagtaaaac cctccttcat
     1861 ttcgcgtaag agtgtggcat tgcctgcgtg aaatgtattt gcatgagagt ggaaagactc
     1921 tggccgagtc caggttctct gagatgtgag aacagatctt ccccacacgt gtggtgccct
     1981 gtgcactccc tagcctcgtg tgtgctcttg gaagtcttcc cgtcaggatg gtggacagca
     2041 tttcaccttc actgaaaaca tccaagcctg tttctacttc caactcgctc acgtgtgatt
     2101 gtggggactg aaccaaccac tcgtcagaaa tgtcatgcac attcggtcag tgacatcaca
     2161 tggcagtgca cactcagaac tagccatccc tgtgacccag agcgcaccag tgtcagtggg
     2221 tcactttggc cgagaagcaa actgaacata ccagtcctgt gagagcatta gctgaggtat
     2281 gacaggagag accttgtgct aagtctcttt ttctttgtca cttgcatact tggcatttga
     2341 aatcacatgt cagttggtcc ctctgtattt aacacccttg agaggtcttg atatctacag
     2401 ttggctgatc ttcttacaac ttgcataaat aaactcagaa attgtgtttg tttagccaca
     2461 gggtagagta cggtggttcc acgcagtcta aacttggtac ctagctggtg ctccaatcag
     2521 tttgggatca cttcctgatg taaagtagga gttagttgta gccaagaatt acagaaaaca
     2581 tgctttattg atcctagtca ggaactctta ggaagcatac ataaagccaa gtacataggt
     2641 gtttggctgt cagagtaaaa caatgttaaa accatcatca tgatttatga gcttgtatct
     2701 caacccggtg ctatggacta aataaaatgt ctggaataag taacctgtg
//
