LOCUS       XM_039113378            7997 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus tectonin beta-propeller repeat
            containing 2 (Tecpr2), transcript variant X1, mRNA.
ACCESSION   XM_039113378
VERSION     XM_039113378.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7997
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7997
                     /gene="Tecpr2"
                     /note="tectonin beta-propeller repeat containing 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 ESTs, 2 long SRA reads, 4 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 115 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:314456"
                     /db_xref="RGD:1307503"
     CDS             507..4760
                     /gene="Tecpr2"
                     /codon_start=1
                     /product="tectonin beta-propeller repeat-containing
                     protein 2 isoform X1"
                     /protein_id="XP_038969306.1"
                     /db_xref="GeneID:314456"
                     /db_xref="RGD:1307503"
                     /translation="MASVSEPVTFREFCPLYYLLNAIPTKIQRGFRSIVVYLTALDTN
                     GDYIAVGSSIGMLYLYCRHLNQMKKYNFEGKTESITVVKLLSCFDDLVAVGTASGRVA
                     VFQLVSSLPGRNKQLRRFDVTGVHKTSITALAWSPNGMKLFSGDDKGKIVYSSLDLDQ
                     GICNSHLVLEEPSSIVQLDYSQKVLLVSTLQRSLLFYTEEKAVKQIGSQPRKSTGKFG
                     ACFIPGLCKQSDLTLYAARPGLRLWKADVHGTVQATFILKDVFAGGVTPFELYPRLEP
                     SDGGSCSAPEKHLGLVSCFFQEGWVLSWNEYSIYLLDTVNQATVAGLEGLGDIVSVSC
                     TENEIFFLKGDRNIIRISSRPEGLASIVRDSPEMARCSEQVHGQHLEKSLGGTVCEAR
                     LRGSSVASSVASEQRSRSSSFNSTDSGSGLLPPGSQAAPELGHSGQPSSQRFSVISSE
                     DFDQELIVKPIKVKKRRRKRKPEGGSKSTCHSSLESTPCSELPADSPQSLSTDLVSLA
                     SSVLSGSSVDQLSTEPPDQEISPSGELDGIIQDNNGPQTLHDLEVPGSTPSPVDEENS
                     PRKEASQCDHTQDTDLLKGVLTLPLQPGEDEGDADVTSELEEKPGPAADAAIHTELCL
                     QEQNSSAEQQEVDTMEFSDPQSTFSEAPLLDSSMLPASLSWPPGAEQWLPEIEGYEVS
                     TEEASPEADILTQAEVPSHLSSNPWHLLTDSQKEAPAFECDMGNVKGQVTPLTSALVA
                     NTHAHWLDQPFQDQAVTSSDEEDIYAHRLPSSSSETSVTELGAGRSLQDLSQPGAEET
                     SLLKADQFAESWMGYSGPGYGILSLAVSEKFIWCLDYKGGLFCSALPGAGLRWQRFED
                     AVQQMAVSPSGALLWKIEQKSNRAFACGKVTIKGKRHWYEALPQAVFVTLSDDTAWII
                     RTNGDLYLQTGLSVDRPCARAVKVDCPYPLSQITARNSVVWALTEQRALLYREGVSSF
                     CPEGEQWKCDIVSERQALEPVCITLGDQHTLWALDIHGKLWFRTGVIPKKPQGDDDHW
                     WQVSITDYVVFDQCSLFQTIMHATHSVATAAQAPVEKVADKLRMAFWSQQLQCQPSLL
                     GVNKSGVWISSGKNEFHVAKGSLIGTYWNNVVPRGTASATKWAFVLASPAPTQDGSSL
                     WLCQSSKDLCVLSAQSAQCRPSTVQLPPDAEMRTYAACQDALWALDSLGQVFIRTLSK
                     SCPTGMHWTKLDLSQLGAVRLTSLACGNEHIWACDSKGGLYFRVGTQPLNPSLMLPAW
                     ITIEPPVQLAGVTLVSVHSSPNDQMLWALDSRWNVHVRTGVTEEMPVGTDWEHVPGLQ
                     ACQLALSTRTVWARCPNGDLARRYGITDKNPAGDYWKKIPGNVSCFTVTSSDELWAVG
                     SSGCLLQRLTKTFSHSHNTQNNQAATSHPEELEDEWEVI"
ORIGIN      
        1 aggagtcctg aggggctgcc gcgggaggtg agttcgggag cgtgctggtg ggtgctggac
       61 gcctccgacg tcccgacgcc gcccctcgcc tttccgcccc ctggcagggc cgcctttcct
      121 tgtctcagcc cctcagagtc tccacagccg tgttgccgtc cccctggcag ccaccgcacg
      181 cggcgcgtct gtcagcccgc gtctgtgcag agcaccgggc gccgcagcgt tcgcacaccg
      241 cccggggccg ccacggcgcc ccagctcccc tcgctcctcc cctcctgccc caccctgcat
      301 ccctctcgcg gcgggctcca ggctcctcag ccttaagatt gacattgcgt tctgttctgt
      361 tcccggatcc tcagctgtat cccttacatt cgcccaccaa cgccaagcag ctggcttggg
      421 cacccagtag gagttgaccc ataggtttcc ctagatgacg aataaacatt catactgtct
      481 ggagaacatc tgcggaaacc ttgaccatgg catcggtgtc agagcctgta acgttccgag
      541 aattctgccc tttgtactat ctcctcaacg ccattcccac aaagatccag agaggctttc
      601 gctccattgt ggtctacctc acagccctgg acaccaacgg ggactacatt gcagtgggca
      661 gcagcattgg catgctctac ctgtactgcc ggcacctcaa ccagatgaag aagtacaact
      721 tcgaagggaa gacagagtct atcactgtgg tgaagctgct gagctgcttt gatgacctgg
      781 ttgcagtggg cactgcctcc gggagggtcg cagttttcca gcttgtgtct tcattgccag
      841 ggaggaataa gcagcttcgc agatttgatg ttactggtgt tcacaagacc agcattacag
      901 ctctggcttg gagccccaat ggaatgaagc tgttctctgg agatgacaaa gggaagatcg
      961 tctactcctc tctagatcta gaccagggga tctgcaactc acacctcgtg ttagaagagc
     1021 cgtcctccat tgtgcagttg gactacagcc agaaagtgct gctcgtgtcg accttgcaga
     1081 gaagcctgct cttttacaca gaggaaaagg cggtcaagca gattggatcc caaccaagga
     1141 aaagtactgg gaaatttggt gcttgtttta taccaggact gtgtaagcaa agcgatctaa
     1201 ccctgtacgc agcccggcct gggctccggc tgtggaaggc tgatgtccac gggaccgttc
     1261 aggccacgtt catccttaag gatgtctttg ctggaggagt cacacctttt gagctctacc
     1321 ctcgtctgga gccctctgat ggggggagct gcagcgctcc tgagaaacac ctggggcttg
     1381 tctcctgctt cttccaagag ggctgggtgt tgagctggaa tgagtacagt atctatcttc
     1441 tggacactgt caatcaggcc acagttgctg gtttggaagg actgggtgat attgtgtctg
     1501 tttcctgcac agaaaatgaa atatttttcc taaagggaga taggaacatt ataaggattt
     1561 caagcagacc tgaaggactc gcatccatag tgagagacag tccagagatg gcacgatgct
     1621 ctgagcaggt ccatggacag catctggaga agtccctggg aggcactgtg tgcgaggcac
     1681 ggcttcgagg ctcttctgtg gccagctccg tggccagtga gcagcggagc aggagcagtt
     1741 cattcaattc cacggacagt ggctccgggc tgctgccgcc tggatctcag gctgcccctg
     1801 agctgggcca cagtggtcag ccatcctcac agagattcag tgtcatcagc tctgaagact
     1861 ttgaccagga gcttattgtg aaacctatca aagtgaagaa gaggaggagg aagcgcaagc
     1921 cagaaggcgg aagcaagagc acctgccaca gttccctcga gtcaactccc tgctccgagc
     1981 tccctgctga cagcccccag tccttgagca cagaccttgt gtccttggcc tcaagtgttc
     2041 tgagcggcag tagtgtggat cagttgagca cagagccgcc agaccaggag atcagcccca
     2101 gtggtgagtt ggatgggatc atacaggaca acaatggccc tcaaacactc catgacctgg
     2161 aggtgcctgg gtctaccccc agtccagtgg atgaagaaaa tagccctaga aaggaagctt
     2221 cccagtgtga ccacacacag gacacagacc tgctcaaagg agtgttgact ttacccttgc
     2281 agccagggga ggatgaggga gatgctgacg tcacctcaga gcttgaagag aagcctgggc
     2341 ctgctgctga tgcagcaata cacacagagt tatgcctgca agaacagaac agctctgctg
     2401 agcagcagga ggtggacacc atggagttca gtgaccccca gagcactttt tctgaagccc
     2461 cacttctgga ctcaagtatg ctacctgcca gcctcagctg gcccccaggt gctgagcagt
     2521 ggctgcctga gatcgaaggt tatgaggtca gcactgagga ggccagccca gaagcagaca
     2581 tcctgaccca ggcagaggtc cctagccacc tgagctcaaa tccttggcat ttactaactg
     2641 atagtcagaa ggaagcacct gcttttgaat gtgacatggg aaatgtgaaa ggacaggtga
     2701 ctcctcttac ctctgccttg gtggccaaca cccatgcaca ttggctggac caacccttcc
     2761 aggatcaggc agtgacatcc agtgatgagg aagacattta cgcccacaga ctcccatctt
     2821 catcctcaga gacgagtgtc acagagcttg gagctggtcg ttctctgcag gacctgagcc
     2881 aaccaggtgc tgaggaaacc tcactgctca aggcagatca gtttgcagag agctggatgg
     2941 gctactcagg tcctggctat ggcatcctca gcttggcggt ctcggaaaag tttatctggt
     3001 gcctggacta caaaggtggc ctgttctgca gtgccctgcc tggtgcgggg ctgcgctggc
     3061 agaggtttga agatgctgtc cagcagatgg cagtctctcc ttcaggggct cttctctgga
     3121 agattgaaca gaaatctaac cgtgcttttg cttgtggcaa agtcaccatc aaggggaagc
     3181 gacactggta cgaggctctg ccccaggctg tgtttgtgac cctgagtgat gacacagcct
     3241 ggatcatcag gaccaatgga gatctgtacc ttcagacagg tctcagcgtg gatcggccct
     3301 gcgcccgagc cgtgaaggtt gactgtccct acccactgtc ccagatcaca gcccggaaca
     3361 gtgtggtgtg ggcactgacg gagcagaggg ccctcctgta ccgggagggt gtgagcagct
     3421 tctgcccgga aggggaacaa tggaagtgtg acattgtcag tgaaaggcaa gctctggagc
     3481 ctgtctgcat aactctcgga gatcagcaca cactctgggc cttggacatt catgggaagc
     3541 tatggttcag aactggcgtg attcccaaga agccccaagg agatgatgat cactggtggc
     3601 aggtgagcat cacggactat gtggtgtttg accagtgcag cttgttccag accatcatgc
     3661 atgccacaca ctcagtagcg acagccgcgc aagcccctgt ggaaaaggtt gcagataaac
     3721 tgcgcatggc attttggtct cagcagcttc agtgccagcc cagcctacta ggggttaaca
     3781 agagtggtgt gtggatctcc tcagggaaga atgaattcca tgttgctaaa ggaagtctca
     3841 taggaactta ctggaacaac gtggttcccc ggggaacagc ttctgccaca aaatgggcct
     3901 ttgtgttggc ttcccctgct cccacccagg atggaagctc cttatggcta tgccagagca
     3961 gcaaggacct gtgtgtcctc agtgcccaga gtgcacagtg ccgcccctcc acggtgcagc
     4021 tgccccccga tgcagagatg aggacttacg cagcctgcca ggatgcactg tgggccttgg
     4081 acagcctggg acaggtgttc atcaggacac tttccaagag ctgcccaaca ggcatgcact
     4141 ggacgaaact ggacctttcc cagctaggag ctgtgaggct gaccagcttg gcctgtggaa
     4201 atgagcatat ctgggcctgc gactccaagg gtgggcttta cttccgtgtt ggaacccagc
     4261 ctctgaatcc cagtctgatg cttccagcct ggatcacgat tgagccaccg gtccagcttg
     4321 ctggggtcac tttggtcagc gtccattcta gccccaatga ccagatgttg tgggccctgg
     4381 atagcaggtg gaatgtgcac gtgagaactg gagtcaccga ggagatgccc gtggggacag
     4441 actgggagca cgtgccagga ttacaggcct gccagttggc actgagcacc aggaccgtgt
     4501 gggcccgctg tccaaatggt gaccttgccc gccgctatgg catcacagac aaaaatcctg
     4561 ctggggacta ctggaagaaa atcccgggaa atgtatcctg tttcacagtg acctcatcag
     4621 acgagctgtg ggcagtgggc tcctctggct gtctccttca gcgactgaca aagacgttca
     4681 gccattcaca caacacccag aacaaccagg cagccacctc ccaccctgag gagctggagg
     4741 acgagtggga ggtcatctga aggagccgag gcagccagtg gaggaggaag ctgggttctg
     4801 tgatggaggc agcctatctc cctgtggctc cttgtggaca tgcctcatcc accaggctgg
     4861 acacccacac tcgctttcat ccgtatttgt tttggtctca ttacagaact cacagcctta
     4921 gccatgtgct tggaactgtc gcttgtagga acagcacctt ggacatctta ccaaggtccc
     4981 ctccaagtga gagcagtggc tgccgctcag ctgcacgcac gagttccctg tgcacccagg
     5041 acattcttat ccgcaattgc aggtcctggt gtgtgagcca ggagggacag gcacatgtcc
     5101 ataccagaac cccagaccaa atggccggcc ggtcagagct tgcagccact ggatatgttt
     5161 ggtgacagtg ttgacattat cacagggtcc cacacttctc tcctagaggt ccaggccaca
     5221 gtgcacatcc cacacgggac attccaggta ggaaaggacc catgctggct ggggtgcggg
     5281 gctgtgccgg gtgaacatgt acaccctcgc ctcaccatgc tgcccacact cagggtagct
     5341 gcccatcctg cccacctcag ccgacacgcc agccagtggg tgcagacgga gcacaggtgc
     5401 ccacgtggtc catgtagctc agcacccctg agacatcttg ggaatgacac ttgacagtat
     5461 gctggtaggc atcctaacgc tgggctcttc ctcaaaagat gaatctagta actgcctttc
     5521 atttgttatg ttacagacct gaataagata cctcacttaa aatcaaatct cacagattga
     5581 gaagataaat gtttcttctg aaaatagtga aggtcttttg ttccttcatg agatttatcc
     5641 taagcccacc ttgtcttggc tatagctttg caggggtggc tgtcccctat catgtcctca
     5701 cccaagagca gccactgtct gcagtaggca tagcattgac tcccccgtgg ctagtgtaat
     5761 acagtgcctc tgctcacggc tgctgtgtcc ctccgcagtg gtggggacag agcatctgag
     5821 cttcaagggc aggctgccca ccccaccacc aggtccctgt taccactcca gactggctgc
     5881 ttttcttagt ccgcctggtc caggcagtta cttgatgtct gttttctgct aagcatgtcg
     5941 ggcccagcag tgacggtgca gaggctcccg gtctcagcag tggtgagctg cccggggcct
     6001 tgactgcact tcatcttata gactccttct caagagttca gtgacagcag aggcagctcc
     6061 gagtgggccg atcctctcct gtggacggtg ccttgcccgg ctcctcacaa tggcagcagt
     6121 cccctaagcc cacaggacgc tagtgcaatt aagcccaagt taagtggaca ctttcagcct
     6181 agctttagct ccactgcttc gtgtgatttt ctttttggtt tacattttag ttgtgcttta
     6241 gatcatgcaa aatactactt tttccaactg tggagtctgc agagtgagct gggggtacac
     6301 caagcccagc agcccagcca cactgcagca gagtgccagc cactgcctgg gtggcttgaa
     6361 gcagcctgca cagatggtac agtgggcagc gccattccac agcagcacac cacctctggc
     6421 aggcctagag agaatgctgc aaagaaggca cagtgaaggg aagtcccaag acattagtct
     6481 tcggctgttg ctttgagtca gtcttctata gcccaggttg gcttccagtt caccgtgtag
     6541 caagccaaga atggcctttg ctgatcttcc tgcacccacc ttttaagttc tgggattatg
     6601 ggtgtacact accatgtcct ctgaagacat cagattccat gcaaagaagt ccaagagtat
     6661 agctctttca gaatccccac tggaatgttt ctcttgcaca ggggaattct taaaatcatg
     6721 accgttccca cagacatccc atgtacatgc tcagatctct aacttaatgt ccttctctag
     6781 agcccacggg ggagaatagg gttagtctgt gagcctcaga ctcacaggcg gttgggtgcc
     6841 ttattccagt cacagtgatc acgtaccagg acctggcttg gcagaccagc tgacctgtgc
     6901 tgatgccaca aactcctgga gttgccccaa caagggccag catgtcaggt acggcccaga
     6961 tcatggcagg gccttcaccc caggcagcca ggctgcccct gtatcccagc attccatagg
     7021 catcgcaggg ggcaggggga gggaggcaac agctgctgtg cctactgttt ccacttggca
     7081 cagaaaacct gcctttgctt tctggagggc aagtgctttc tactcaaacg atgggacacc
     7141 acagaaaacc catatggaga ttttacttat tcaaaatgta gaacctgtaa gttagaaatc
     7201 ctgtgtgggg ctgggatgtg gcttagtgat ggaagacaga tcaaaactac gtggactcca
     7261 agcatgccta caatcccagc actcaggaag ccgagtattg tcacgagttc cagaccagcc
     7321 tggaccacaa agatcctgtc tcaaaaaaac ctgaacttaa agtaaacaaa ctgagagccc
     7381 ggattgccac aacgttggca tccatgttga atttgcccaa atcagtagga acagacacaa
     7441 cactaaggtg gacaacagag gtgaagaggc actgacagaa acaccctcca gtaggagacc
     7501 ccaaaggcac agctctcaga gaaagcctca gtccaaaagc ccaacactaa aaatgccatc
     7561 tctgaacatt cgtcaagagc aaaactagag ctgtgtctct agcacagaga cccaggcctt
     7621 gcctggcatg cagggcctgg ctacagttcc cagagtggca acaaaaaact aacgagaggg
     7681 acagtgccac tgtttgtggg cttgagcata tgcctgcagt gccacaggat gtatgtcagc
     7741 agagcgtact gtggggtccc acaggcaatc tcagggtgct gagagactct ggcttgtcag
     7801 gtcagtacgg tttacagaga gaacattgca tggtgggggg cactgtatat ggagcagagg
     7861 gagacaagtt ctcacctggg acaaacagct ggtcagtgat tgttcccaag cctgtgtctt
     7921 tttatccttt gaatgttgag ccatgtaaat gtattattta tttcaaaact aaataaaatt
     7981 tacatgtaga aactcaa
//
