LOCUS       NM_001100791            2619 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus testis development related protein (Tdrp), mRNA.
ACCESSION   NM_001100791 XM_001075039 XM_573943
VERSION     NM_001100791.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2619)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 2619)
  AUTHORS   Wang,X., Jiang,H., Zhou,W., Zhang,Z., Yang,Z., Lu,Y., Lu,B.,
            Wang,X., Ding,Q. and Hu,R.
  TITLE     Molecular cloning of a novel nuclear factor, TDRP1, in
            spermatogenic cells of testis and its relationship with
            spermatogenesis
  JOURNAL   Biochem Biophys Res Commun 394 (1), 29-35 (2010)
   PUBMED   20170638
  REMARK    GeneRIF: These current data demonstrated that as a nuclear factor,
            TDRP1 might play an important role in spermatogenesis.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Feb 15, 2022 this sequence version replaced NM_001100791.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168702.1, SRR26360186.1297687.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-26                JAXUCZ010000016.1  82327133-82327158
            27-215              JAXUCZ010000016.1  82327456-82327644
            216-313             JAXUCZ010000016.1  82350975-82351072
            314-2619            JAXUCZ010000016.1  82352556-82354861
FEATURES             Location/Qualifiers
     source          1..2619
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..2619
                     /gene="Tdrp"
                     /note="testis development related protein"
                     /db_xref="GeneID:498662"
                     /db_xref="RGD:1559733"
     exon            1..26
                     /gene="Tdrp"
                     /inference="alignment:Splign:2.1.0"
     exon            27..215
                     /gene="Tdrp"
                     /inference="alignment:Splign:2.1.0"
     CDS             114..662
                     /gene="Tdrp"
                     /note="uncharacterized protein C8orf42 homolog"
                     /codon_start=1
                     /product="testis development-related protein"
                     /protein_id="NP_001094261.1"
                     /db_xref="GeneID:498662"
                     /db_xref="RGD:1559733"
                     /translation="MWKLSRSRVLLDEPPEEEDVLRGASPASAAAQAPGASLRGWKEA
                     TSLFNKDDEERLLETSRSSKSKGTNVRLKEELKAEKKSGFWDALVLKQNVQPKKPDQM
                     EGWEPPKLTAEDVATDHTEDGISSLPPWSAWEDDTKGSTKYTSLASSASSSRWSLRSA
                     GKLVSIRRQSKGHLTETCEEVE"
     exon            216..313
                     /gene="Tdrp"
                     /inference="alignment:Splign:2.1.0"
     exon            314..2619
                     /gene="Tdrp"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggatggacc acgcccatcg ggctggtcct ccgcactgtc ccagcgccgc ggccggccgg
       61 gcgtcctccc tcagtccggg agcgacgctg cgccgagcgg acaagcaccc gagatgtgga
      121 agctgagccg aagtcgagtg cttctggacg agccccccga ggaagaggac gtgctgcgag
      181 gggcatcgcc ggcatcagca gccgctcagg cgccgggggc aagcctcaga ggttggaaag
      241 aagcaacatc tctgtttaat aaagatgacg aagaacgcct gctcgagact tccagatcgt
      301 ccaagtccaa aggaactaac gtacgactca aagaagagct gaaggcagag aagaaatcgg
      361 gattttggga cgccttggtt ttgaaacaga atgttcagcc taaaaagcca gatcagatgg
      421 aaggttggga gcctcccaag ctcactgctg aagacgtggc caccgaccat accgaggacg
      481 gtataagcag cctcccaccc tggtctgcct gggaggacga taccaagggc tctaccaagt
      541 acaccagcct cgccagctca gccagcagct cccgctggag cctccgctca gcggggaagc
      601 tggtcagcat caggcgacag agcaaaggcc acctgacaga gacctgtgag gaggtggaat
      661 gaactgaagg ggcttcacag ggcaccacat tgcttttacg gtcggccaag cccgctggcc
      721 gcctcctagt gcaccattaa ttccttgagc cctctcctag cccagggaag gaacccactg
      781 agttgcttgt gtttcgtgct cagtgaccca cacacaccat ggcttcctgg tgacatctgg
      841 tcgccttgct gcagaaacgt ccacccgctg ggagcgtgta tgctgaacgg atgtgtgcat
      901 tgtagacact gtcctgtgag ccagtctcct ctagggttca tgccagcctc actcacctga
      961 gtttttagga cgtccccatc ttgtccctgc atgagacatg agtgccgcag ctaactgaac
     1021 atggcctctg tggcgccctc tccctttgtc agaagcaact cccaaaggtt acagtaactc
     1081 agtttaacaa cagattcatt tttccttatt aagttaaaag caaagcaaag tctggattct
     1141 ggaagcaagg tggtctgagg tagggagtca gggcatcttg agggcgcatc tgcttaggag
     1201 gagtggtctg cagtgtgggc ctggggcggc aactagttct tttatggaat tttattttta
     1261 cctttgaacg tttaaataca gatctttatt ttcttccaga acgtgttgat ttttaaactt
     1321 aaagacgaaa gaaatactag gaataaattt tggtcaccca ataatctttg ctcagaaaac
     1381 attaacttgc tcactgtaga gttaaactgt agataaaaca ctgaagtgcc tcgtttctat
     1441 tcttctcaga tgattagttt ttcaaaatga gaagcttttg tgactgatgt taaatctata
     1501 agaagtgtgt ctccccctac tctgcctgtc tcacactgct gactgtcctc ggctgtggtc
     1561 cctgtatggc tgtctgcagc gcacgtgtgt gtctttgctc tccagttata ggacttggac
     1621 aggggagctg tgttcctctc tgttttggtt aagaattaaa agcctcccgt cagtcacact
     1681 gtccttgagt caccacagtg tgagcaccgt gctttgtgtg ccctgatgtc cctcgcagtg
     1741 atccgtggta gggttgagtg gccgggttta ctagatccac cacccagcta gccagccacc
     1801 tgtccacccg tccacgcatc actctgtcta cccataaacc gagctgttag tcttgtaaaa
     1861 atagaacagt aagtttgctt aatgagcttt gagaggaggg ttcgaataaa caacgttaac
     1921 acctggaagt tgtggaatta tggagattct gattcgtagt gcaaagttgt catttttgcc
     1981 ataacatgtg agtttgaaaa catttatcct caggtaaatg gttgagtgca tgagctctga
     2041 ctctctagtc ttcaaaccga ggtaaccgca ggctaggaca gaagagcagg cccatgctga
     2101 cgcccaccgc aggaacccac tggtgtgtct ggctaaccac ctgtggcgca ggaaaacaaa
     2161 cccagccttg agaatgtagg gaacgagctc ttggacacac agcctctgtc tgtgttcact
     2221 gggcctgcgc tgagtgccta tagctcactg tgcccgtgtg cctgagacgc agtgttgcgt
     2281 gttgacacgg ggacctttac cccgtccgtc gcctctcagg aggtgaaaat gcactgtaaa
     2341 ccagaaagag taattaaaaa taatttttcc ttctgttgta tcagattaaa atatcttgcg
     2401 tttgagacct ttagcgtgta tatttattgg tatgcttcca ggagaacgtc tcttcaaagg
     2461 cttcacatga acgtgctctg ctcagatgca gttcgcgatg tcgccgtgat tctggggccg
     2521 gcagagggga cccaatgtct gtacctagaa ctctgttctg tgcttttccg ggaggggcag
     2581 agtcttcctt aaagctaagg attaaagaaa ataaaagaa
//
