LOCUS       XM_006239876            7323 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus tudor domain containing 15 (Tdrd15),
            transcript variant X1, mRNA.
ACCESSION   XM_006239876
VERSION     XM_006239876.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006239876.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006239876.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7323
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7323
                     /gene="Tdrd15"
                     /note="tudor domain containing 15; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102556253"
                     /db_xref="RGD:7716193"
     CDS             1146..7193
                     /gene="Tdrd15"
                     /codon_start=1
                     /product="tudor domain-containing protein 15"
                     /protein_id="XP_006239938.1"
                     /db_xref="GeneID:102556253"
                     /db_xref="RGD:7716193"
                     /translation="MDSTSLLPTLLDADLTVLHIECLPKDILVKFQGKNNSECQFDYH
                     ILQREIQYIPKVANNLGIDEFCLVEERTGEWQRGRVLGKKNEVYTVLLIDRGDELTVD
                     STRVASAYKKIFELPPRVIFGIFANILPVGEKWSPKALNYFRSLVGIQLKGNMQTILP
                     LQMILLEAPKVISGVLELQLGRFVDRDTFRLIVETLKEIPQPMPDLLRHKRPVLQSRS
                     KSTSLDMQYVLDNFQPSLPVGSLDSIKVSSALSPSKFYCQLLKQIPELEDLTERMNLH
                     YDTGDQENSPACENFGLLCVAKGTNGRWQRGILQQVLPDNQVKIWFMDYGGSESVPSV
                     HVKKLKQDFVFAPLFSFPCSLTYLHSPDQEVRKQQLTVFKQALLGHVVSACIDCFSED
                     ERLYYVTLQPQESAAHAKCLQRTRSTQIHCPAFEPDISKALDDAGTYRTDSFVVDVQQ
                     PAGGLNKEDDLRAAFAIKTVKMEIESTYIAFVVNVLNPSNFWVRINKYQNKFQDLMRT
                     INMFYNKPENDELTLRHPGPGLFCCARYSKDRCFYRAIITEVDDYRINVYLLDYGSTH
                     SISLFDAKILLPEFCELPPLAVHCSLAYIAPVTKVWIKAATDYFKKIVLNKAILLQVI
                     RKRDDKYMVNIQNVEAPENTDAVSLMLQAGHAKPAEVPSSGFHKSVRDRLVLKLNTLH
                     EKSVVTSVPVKRPEPERYHSNKLKGNISSLCRFLDLKVSFNLVFEPNPSQSYKEYVFK
                     PGKLLEVNCSYCHGPGDFSCQLQCKLEDLKLLMEQIQAYYSIHPEPYQTGKVACVAKH
                     SRDGKWYRAAILTQASEQEVELIFVDYGNQERVFIKDLCAINPHFLALEAQAFRCCLN
                     YLVEPITYKLLDWTAEASRDFGNFISSCGGLLTCIVYALVLIHPRCLCNLVDLQSPFT
                     SANEFLLRRGSTHHSAFSRPLPFSISLYSYYYSSFDVKIGSEEDVYISHVYSPKRFYC
                     QLCRNSKDLEMLETRITEMINLKMCSKYDWNRMRLCISQYIEDGLSYRALVKPTASAS
                     DTCVYFVDYGNEQLVKENMLCAISDQFPELLFTPMQAIQCFLSDLRDIDIPGEINRWF
                     EDNFLGKPLKAVILSRESDGQLGIDLYDGYQHINQTIKLLLNVYGEKHSKQAWCVGKN
                     QRLNRVSAVSLKENTESKRCHNAINKTSLATHPANKTDRWMRPQSIYSRSLKSSVCCK
                     VEPMPKSKVKKSSKDRLKNIKFAAGSVHIPEDSDTGPNSEERVSKLLTKDLNQSAPQS
                     PQVLIRPPITDIPQTHIDLSTQIKGSAPTIHHPANFHMASTENGNEATELTDVLKEKT
                     DSQKNRNCLTLLVRDHAEYGNDHATSRGVTKNVLAEGSFEVEVFDHGNTAIVNGSKVY
                     SINRELLTIPRLGIGSFLHRVRWDGPIEICKSKIANYFASVMKGTVFCEVWKTPDQKW
                     EVNITCGDKCVIKKLLRWSPCPKPQKLALQMPQAISHKVSPHEADNERTGRVNMCGGS
                     MPFLPFSQQLGENPFELLRHEQLEESKTIYISETGKFHVTLPENQKTSDLALLKAPSG
                     EIISSPRRGVPYKCFWFTHSTLEFIVCLFAHLEMSILSLKYSDYTWEVDLLVNGLLPL
                     GCLNVATSQVEEQRKQRSSGTVFGLEPQTLWSPCTILPSVWPLLQNGKRYSGIATAVC
                     DLSDFCVQLEDFFDIMKHLFTLLSDVPEPLQALPSEHMIPGSSCLFKSELEDRRSRAE
                     ISEVSDQSLHLVLSDLGRSVHVPYSEATNLKSVPQKIMNLPRLSYPCGLYFVLPAMGK
                     LWTNEVRQLFQDCRSKPGLVIQFRENGPGAVSEVDVIQENDSVADTLVASGLARHPKN
                     SAHPDGITAPGCMKAGHKRQSRTICSLLDKHCYKKEDVNYSRNKQKLQRRKRMKRRNV
                     ARHLLKKSHASKKLYSGNLKLRRQVLSGKLNFQSAVLLGICVASLSGGVPDPLENSTD
                     CFGNICEDLSTEGLQEKSYTIDSKAAGANEKITVERLKSAQEKCTRGTSWRPICTWT"
ORIGIN      
        1 attttctttg agagtttata gtagactgga gcttaaggat agaggcaagg gtaggagttg
       61 aaaataaagg ggtgaggctg gctttcccaa ccctgcaaga gggaatattt atccactgtt
      121 gaatgaggaa gagttgtatg aacaggaaat ggagcagagt tgtgatagaa gggtaaacct
      181 gggccttaga gaggggctag cgcaagaact tatagggcac agtggagatg aggacctgag
      241 tatttgggtc aagtcagtcc aggagggagg acactgaatc aggacagtgc tttgtgatga
      301 ggacttacaa tgaatgggaa acaatgttgt cttttgatgt acttattctt tggttgagat
      361 tttaaactgt gtctacttaa tgttgtagct gcgttgtact gacaatgtag ttcctaggga
      421 caatgggtcc ctaagccatt gcttacagtt tgaaccattt ctttaagaga tacagatgtg
      481 ggtgagagga gatttggcaa gggaaagggg aatgccagag cacaggaggt gacgatgtgt
      541 tggcttcgga gattctcttc tttctaaact gtaccaaaaa acacactgct actgtattgg
      601 atggtccaag cctccctgca tccccattga aaaggaaatg atgaaatgta actgcaccat
      661 aagtagaaga aacatcttcc tttaagaatt ggcagggtga acctaccact tccttacaca
      721 gtcagtagta aagtcagtgc tgccttctgg tggcaagaca gaaaactttg tgtgaagcaa
      781 aaagtgtctt taccctttgg aagtccctat gcatgtacac aaaatatacc ttgatcatat
      841 ccagcttccc tctcctccca gctccagttc tccttggtct cccctaacat gactctctcc
      901 cagcttcatc atcttcttca gacggctcat ggctgggcat ttgcagcctc cactgtgtat
      961 gcagcctgtg tgaggcatcc tctctcgcgc agctaatcag cttccctctg tgcacgtggc
     1021 ctcaggctct gcaactggac ttcttcaggt cacaaagggc acgagcaagc ccagagctcg
     1081 ctgccatctt ggtccctggc ggtgttccca aaagaggggc ctggcctgta cagcagttgt
     1141 tgtaaatgga ttctacatct ttattgccaa cacttttaga tgcagatctg acagttttgc
     1201 atattgagtg tcttcctaag gacattcttg tgaaattcca aggcaaaaat aatagtgagt
     1261 gtcagttcga ctatcacata ttgcagaggg aaatacagta tatccccaaa gtggcgaata
     1321 acctgggcat tgatgagttt tgcctggtgg aggaaaggac tggagaatgg cagagaggaa
     1381 gagtcctggg aaagaagaat gaagtctaca cagtgctgct cattgatcgt ggagacgagt
     1441 tgacagttga tagtactcga gtagcctctg cttacaaaaa aatatttgag ctcccgccca
     1501 gagtcatatt tggcatcttt gccaacatac tcccagttgg agagaaatgg tctcccaaag
     1561 ctctgaatta tttcaggtca ctagtaggaa tacagctgaa aggcaatatg caaactattt
     1621 tgccccttca aatgattctt cttgaggcac ccaaagttat atctggggtt cttgaattac
     1681 aattaggaag atttgttgac agggatacgt ttcgtcttat tgtggaaact ttaaaggaaa
     1741 tccctcagcc aatgccagac ttactacgac ataaaagacc ggtgttgcag tcaagaagca
     1801 agagcacttc acttgatatg caatatgtct tagataattt ccagccatct ttaccagtgg
     1861 gaagtttgga cagcatcaaa gtgtcatctg cactaagccc tagtaaattt tattgtcaat
     1921 tacttaagca gattccagag ctagaagacc tcacagagcg tatgaatttg cattacgaca
     1981 caggtgatca agaaaacagc ccggcgtgtg agaattttgg actcctctgt gttgctaaag
     2041 ggacaaatgg gcggtggcaa agagggattc tccagcaggt cttgcccgat aatcaagtaa
     2101 aaatttggtt catggattac ggtggcagcg agtctgtacc ctccgtccac gtgaagaaac
     2161 tgaagcagga ttttgtcttt gcaccgttgt tctcttttcc gtgctccctg acatatttac
     2221 acagcccaga ccaagaagta aggaaacaac agctgactgt atttaagcaa gccctcttgg
     2281 gacacgtagt gtctgcctgc attgactgct tcagtgagga cgaacgtctg tattacgtga
     2341 ctttacagcc tcaagaatct gcagctcatg ctaagtgtct gcagaggacc aggagcacac
     2401 agatacactg tcctgcattt gagccagaca tttccaaagc cttggacgat gcaggcactt
     2461 acaggacaga cagcttcgtg gttgatgttc agcagccagc gggtggacta aacaaagagg
     2521 atgacttaag agcagctttt gctattaaaa cagtaaaaat ggagatcgaa tctacctaca
     2581 tagcgtttgt agtgaacgtg ttgaacccat cgaatttctg ggtacgcatt aataaatatc
     2641 agaataaatt tcaagactta atgagaacta taaatatgtt ttataacaaa cctgaaaatg
     2701 atgaactaac tctgagacac cctggacctg gactattctg ttgtgccaga tacagcaagg
     2761 atagatgttt ctaccgagcc atcatcacag aagtggatga ctatcggatt aatgtttacc
     2821 tcctggacta tggaagtact cactccatat cgctttttga tgccaaaata ttgcttccag
     2881 aattttgtga gttgcctccc ttggccgtgc actgttcact ggcctatata gctccagtga
     2941 caaaagtgtg gataaaggca gcaacagatt actttaaaaa aatcgttttg aacaaagcaa
     3001 tcttgctcca agttataagg aaaagagatg acaaatacat ggtgaatatt cagaatgtcg
     3061 aagctcccga gaatactgat gctgtctctc tgatgctaca agccggacat gcaaaacctg
     3121 cagaggtacc gtcgtcgggt ttccacaaat ctgtaagaga ccgtttagtg ttaaagctaa
     3181 atacgcttca tgagaaaagt gtcgtgacct ctgtccctgt caaaagacct gagcctgaga
     3241 ggtatcattc caataagctg aaaggaaaca tctcatcttt gtgcaggttc ctggatttaa
     3301 aagtttcttt caacttggtt tttgaaccca acccatcaca atcttataag gaatatgtgt
     3361 tcaaaccagg caaacttctt gaagtcaact gttcctactg tcatggccct ggtgactttt
     3421 catgccagct tcagtgtaag ttagaagact taaagctgct gatggaacaa attcaagcat
     3481 actatagcat ccacccagag ccatatcaga ctgggaaggt agcttgtgtt gctaagcatt
     3541 ccagggatgg gaagtggtac cgggctgcca tcttgactca agcatcggaa caagaagttg
     3601 aactaatatt tgttgactat ggcaaccaag agcgagtgtt cattaaagac ctttgtgcta
     3661 tcaacccaca ttttcttgct ttagaagccc aggctttcag atgctgtctc aactatttag
     3721 ttgagcccat tacttataag ctattagact ggacagcaga agcatccaga gactttggaa
     3781 atttcatttc ttcatgtgga gggttactta cctgtatcgt gtatgcctta gtcctcatac
     3841 accctagatg cctatgtaat ttagtggatt tacaatcccc atttaccagt gcaaatgaat
     3901 ttctccttcg ccgtggctcc acccaccaca gcgcattctc aaggccactc ccattttcaa
     3961 ttagcctcta cagttactat tactcttcct ttgacgtaaa gatcggaagt gaagaagatg
     4021 tgtatatatc tcacgtgtat agtcccaaaa ggttctattg ccagctttgt agaaacagca
     4081 aagacttaga gatgctggag acaagaatca cagagatgat taacctcaaa atgtgttcaa
     4141 aatatgactg gaacagaatg agactgtgca tctctcagta catagaggat gggctctcat
     4201 atagagcctt agtgaagcca acagcttcag catctgacac ttgcgtttac tttgtggact
     4261 acgggaatga gcaattggtc aaagaaaata tgctgtgcgc catttctgac cagtttcccg
     4321 agctgctgtt tactcctatg caagcaattc agtgttttct gtcagatctg agagatattg
     4381 atattccagg agaaatcaat agatggtttg aagacaattt cttagggaaa ccattaaaag
     4441 ctgtaatact gtctagggaa tcggatgggc agcttggtat agacttatat gatgggtatc
     4501 aacatataaa tcagacaata aaattgctac ttaatgttta cggagaaaag cattctaaac
     4561 aagcctggtg tgtgggaaag aatcagaggt taaatcgagt atccgctgtt tctttgaaag
     4621 aaaacacaga aagcaagcgt tgccacaatg caataaataa aactagccta gcaacacatc
     4681 ctgcaaacaa aacagatcga tggatgcgtc cccaaagcat atacagcagg agtttgaaat
     4741 catcagtttg ttgtaaagtt gaacccatgc caaaaagcaa agtgaagaag tcctcgaagg
     4801 acagacttaa aaatataaaa tttgccgctg ggtctgtaca cattcctgaa gacagtgaca
     4861 ccggccccaa ctcagaagag agggtatcaa aattacttac caaagattta aatcaatcag
     4921 ctcctcaaag ccctcaagtc cttattagac ctccaatcac agacattcct caaacccaca
     4981 ttgacttgag tacccagatt aaggggtctg cacccacaat ccatcatcca gccaattttc
     5041 atatggcatc tactgagaat ggaaatgaag ccacagaact cactgatgtt ctaaaagaaa
     5101 agacagatag ccagaaaaac cggaactgtc tgacccttct ggtgagagat cacgcagaat
     5161 acggtaatga tcatgccacg tccagaggtg ttactaagaa tgtgttggct gaggggtcct
     5221 ttgaagtgga agtttttgat catggtaata ccgccatagt aaatggatct aaagtttatt
     5281 caattaacag ggaactctta actatccccc ggctgggaat tggatctttt cttcataggg
     5341 taagatggga tgggcccatt gaaatatgta aaagcaaaat tgcaaattat tttgcctcag
     5401 taatgaaggg aacagtcttt tgtgaagttt ggaagacacc tgatcaaaag tgggaagtaa
     5461 atataacttg tggcgataaa tgtgtcatca agaaattgct gagatggtca ccatgtccta
     5521 aaccacagaa gttagcattg cagatgcctc aggccatctc tcacaaagtt agtccccatg
     5581 aagccgacaa tgagaggaca ggaagagtaa atatgtgtgg agggtccatg ccctttctcc
     5641 cattctccca acagctgggt gaaaatcctt ttgaactgtt gagacatgaa cagcttgaag
     5701 aaagcaaaac aatttacatt tcagagactg ggaaatttca tgtgacatta ccagaaaatc
     5761 agaaaacatc tgatttagca ttattaaaag cacctagtgg tgagatcata agtagcccaa
     5821 gacgaggagt accttataaa tgtttttggt tcacacattc tacccttgag ttcattgtgt
     5881 gtttatttgc tcatttggaa atgagcatcc tttctctgaa atattccgac tacacttggg
     5941 aagtggacct tttggtaaat ggcttgttgc ctttggggtg tttaaatgta gcaacatctc
     6001 aggtagaaga acagagaaaa cagcgatctt ctggtactgt ttttggtctg gagccccaga
     6061 cactttggtc accatgtaca atcctgccat ctgtttggcc gctactccaa aatggtaaac
     6121 gatattccgg cattgccact gcggtctgtg acctctcaga cttctgtgtg cagttagagg
     6181 atttctttga tataatgaag cacctcttta ccttgctttc agacgtacca gagcccttgc
     6241 aagcattgcc ttcagagcac atgattcctg ggtctagttg cttgttcaaa agtgagttgg
     6301 aagatcggag gagcagggca gaaatttctg aagtttcaga tcagtcttta catctcgttt
     6361 tgagcgacct tggacgttct gttcatgtac cttattcaga agcaacgaat cttaaatctg
     6421 tacctcagaa aattatgaac ttgccaaggc tgagctaccc atgtggcctc tattttgtcc
     6481 tgcctgctat ggggaaactg tggactaatg aagtcagaca gcttttccaa gattgccgaa
     6541 gcaaaccggg attagttatt cagttcaggg agaatggtcc tggagcagta tccgaagtgg
     6601 atgtcattca ggagaacgac agtgtagcag atacgctagt ggcatctggt ctagccaggc
     6661 atcctaagaa ttcagctcat cctgacggaa ttactgctcc tggatgtatg aaagccgggc
     6721 ataaacggca gagccgtacc atctgctcac tgttggacaa acattgttac aaaaaagaag
     6781 atgttaatta tagcagaaac aaacaaaagc tacaaaggag gaaacgtatg aagaggagaa
     6841 acgttgctag gcacctccta aagaaaagcc atgccagtaa aaaattatac tctggaaatt
     6901 taaaactgag aagacaagtc ctcagtggga aacttaactt ccaaagtgcg gttctgttgg
     6961 ggatatgtgt agcatctctg tctggcggag tacctgatcc tttagagaac agcacagact
     7021 gctttggaaa catttgtgaa gacctatcaa ctgaaggact ccaagaaaag agttacacaa
     7081 tagactcaaa agcagcgggc gctaacgaaa aaattacagt agaacgcttg aaaagtgctc
     7141 aggagaaatg tactcgagga acatcatggc gtccaatatg cacctggacc tgacgttttt
     7201 cattataaat tattttaatc aaccaattta cttttctagt cagttttgag ccagggtctt
     7261 atgtatgtac ttcaggcttg ccttggatct ctgtgtggac taagctactc acaaaatgtt
     7321 gat
//
