LOCUS       XM_039103341            1448 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus TD and POZ domain containing 2
            (Tdpoz2), mRNA.
ACCESSION   XM_039103341
VERSION     XM_039103341.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103341.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1448
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1448
                     /gene="Tdpoz2"
                     /note="TD and POZ domain containing 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins, and 72% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120100600"
                     /db_xref="RGD:41312520"
     CDS             30..1124
                     /gene="Tdpoz2"
                     /codon_start=1
                     /product="TD and POZ domain-containing protein 2-like"
                     /protein_id="XP_038959269.1"
                     /db_xref="GeneID:120100600"
                     /db_xref="RGD:41312520"
                     /translation="MSGDLEAKSCGYTHISVQKFCYEWTISNFSFCMDGIRENITSPV
                     FSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLRLHSCPKSPVLAKVQFWIINAQGEKH
                     QIKEIPNILSFSPKQQWGLRKFILRDFLLSLRHWLLPEDQLILCCKVSIVGPSFSTPG
                     HNMTPTNKDPRQMLADDIGELWKNSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFE
                     HEMLESLTNRVEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATDLLAAAEMYDLQDLK
                     VMCEDSLCRNLSVKNAVPTLILADLHSTEHLKTRVMDFIILHASEVSKTLEWKSMVES
                     HPHLVEEAFLSLTSIQCFSSEPSLKHRKIF"
ORIGIN      
        1 ctttaacctc caaactacct ccagaagaca tgtcagggga cctggaagcc aagagctgtg
       61 gctacacaca tatcagtgtt cagaagttct gctatgagtg gaccattagc aacttttcat
      121 tttgcatgga tggaattcgg gaaaatatta caagcccagt gttctcatta gagggcaatg
      181 aagaagtaca atggtgtttg agaatattcc caaatggtgt tgatgaagaa agcaaagatt
      241 acctgtctgt ttccctgcgt ttgcacagtt gtccaaagag cccagttttg gcaaaggtgc
      301 agttctggat cataaatgcc caaggagaga aacatcaaat caaagagatc ccaaatattt
      361 taagctttag tccaaaacaa caatggggat tgagaaagtt catccttcga gatttcctcc
      421 tctcccttag gcattggctt ctccctgaag accagctcat cctgtgttgt aaggtgtcca
      481 tagtaggacc ctcctttagc acgcctggac ataacatgac acctacaaac aaggatccaa
      541 ggcagatgtt ggctgatgac ataggagagc tgtggaaaaa ttctctcttc acagactgca
      601 gcctggtggt agctggccag gaattcagag ctcacaaggc cattctagca gctcgctctc
      661 cagttttcag agccatgttt gaacatgaaa tgctggagag cctaacaaac cgcgtggaga
      721 tccatgacat tcacctgcaa gtctttaagg aaatgatggc cttcatttac acagggaagg
      781 caccacacct ccacagccac tcaatggcca ctgatttgtt ggcagctgct gaaatgtatg
      841 atctgcagga cttgaaggtc atgtgtgagg attccctgtg caggaacctc tctgtgaaga
      901 atgctgtacc aactctgatc ctggctgacc tccacagcac agagcacctg aagactaggg
      961 tcatggattt cattatactt catgcttctg aagtgtctaa gaccttggag tggaagtcaa
     1021 tggtggagtc acatccccac ttggtggagg aagcatttct ctccctgact tctatacagt
     1081 gtttttcctc ggagccttca ctcaaacacc gaaagatatt ttaggagctt gacagatatg
     1141 accaacacct ggcttctaac aactacaact agtgttttta acaatgactt ctgtttagat
     1201 tacagttttg ctggaacatt tacagtgaat ctgggtcaag gtagcatgat ggctatggat
     1261 ttcatacagc tgtaatattt caaaatggtg tgtagggaaa gggcagcact agggtcttgg
     1321 acattctacc tgacatctat cctgttgatg ttgtcttatt cttgtctgat gtcttggaac
     1381 tggcattcaa ctggcctgaa gcggagcctg actttctttg gagaaacctg tttgcattgg
     1441 actgagca
//
