LOCUS       NM_001401840            3562 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus tectonic family member 3 (Tctn3), mRNA.
ACCESSION   NM_001401840 XM_003749109
VERSION     NM_001401840.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3562)
  AUTHORS   Thomas,S., Legendre,M., Saunier,S., Bessieres,B., Alby,C.,
            Bonniere,M., Toutain,A., Loeuillet,L., Szymanska,K., Jossic,F.,
            Gaillard,D., Yacoubi,M.T., Mougou-Zerelli,S., David,A.,
            Barthez,M.A., Ville,Y., Bole-Feysot,C., Nitschke,P., Lyonnet,S.,
            Munnich,A., Johnson,C.A., Encha-Razavi,F., Cormier-Daire,V.,
            Thauvin-Robinet,C., Vekemans,M. and Attie-Bitach,T.
  TITLE     TCTN3 mutations cause Mohr-Majewski syndrome
  JOURNAL   Am J Hum Genet 91 (2), 372-378 (2012)
   PUBMED   22883145
REFERENCE   2  (bases 1 to 3562)
  AUTHORS   Garcia-Gonzalo,F.R., Corbit,K.C., Sirerol-Piquer,M.S.,
            Ramaswami,G., Otto,E.A., Noriega,T.R., Seol,A.D., Robinson,J.F.,
            Bennett,C.L., Josifova,D.J., Garcia-Verdugo,J.M., Katsanis,N.,
            Hildebrandt,F. and Reiter,J.F.
  TITLE     A transition zone complex regulates mammalian ciliogenesis and
            ciliary membrane composition
  JOURNAL   Nat Genet 43 (8), 776-784 (2011)
   PUBMED   21725307
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3562)
  AUTHORS   Park,K.M., Kang,E., Jeon,Y.J., Kim,N., Kim,N.S., Yoo,H.S.,
            Yeom,Y.I. and Kim,S.J.
  TITLE     Identification of novel regulators of apoptosis using a
            high-throughput cell-based screen
  JOURNAL   Mol Cells 23 (2), 170-174 (2007)
   PUBMED   17464193
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 28, 2022 this sequence version replaced XM_003749109.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643290.6021.1,
                                           SRR21887620.599589.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-288               JAXUCZ010000001.1  249374411-249374698 c
            289-412             JAXUCZ010000001.1  249374138-249374261 c
            413-531             JAXUCZ010000001.1  249373789-249373907 c
            532-659             JAXUCZ010000001.1  249371842-249371969 c
            660-768             JAXUCZ010000001.1  249371542-249371650 c
            769-884             JAXUCZ010000001.1  249371333-249371448 c
            885-920             JAXUCZ010000001.1  249370855-249370890 c
            921-1001            JAXUCZ010000001.1  249370241-249370321 c
            1002-1127           JAXUCZ010000001.1  249369230-249369355 c
            1128-1235           JAXUCZ010000001.1  249368144-249368251 c
            1236-1330           JAXUCZ010000001.1  249367640-249367734 c
            1331-1484           JAXUCZ010000001.1  249367248-249367401 c
            1485-1622           JAXUCZ010000001.1  249366045-249366182 c
            1623-3562           JAXUCZ010000001.1  249363428-249365367 c
FEATURES             Location/Qualifiers
     source          1..3562
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q54"
     gene            1..3562
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /note="tectonic family member 3"
                     /db_xref="GeneID:309486"
                     /db_xref="RGD:1305166"
     exon            1..288
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     CDS             57..1856
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /note="tectonic-3; tectonic-3-like"
                     /codon_start=1
                     /product="tectonic-3 precursor"
                     /protein_id="NP_001388769.1"
                     /db_xref="GeneID:309486"
                     /db_xref="RGD:1305166"
                     /translation="MCTPQLLLLLLLLLLVGLMLSDAARPQPSSTARALPTSWVLGPV
                     TPEVPTTAPPDLSESPTPWTLSMPENATTDPFPALSICVCDLTPGTCDLNCCCDKDCD
                     LLHPRTVFSFCLPGSVRSSSWVCVDNSLVFRSNSPFPSRVFTDSSGITQFCVRVNNSK
                     SNYFQELQTVNATNFQALAAEFGGQFFTSTPKTQPPGPFYRAGDPILIYYPGLSVVSL
                     LRQPAAVGAGGLCAESNPAGFLESKSTTCARFFKDLTSSCTSEPALDAASYHNFRVLK
                     VPRAMTDLQSMKFQVPVTLASQTSPPLLAGNTCQNIVSQVIYEIETNGTFGIQKVSVS
                     FRQTNLTVKPGVSLQQDFIIHFRAFQQREAASPAAPRSGNPGYLTGKPLLVLTGDLSH
                     SMTLLQSEGNGLCSAKRHEVQFGVNTVSGCQLRPKEVNCSHLQEEIYQTLHGRPRPEH
                     VAIFGNADPAQKGGWTRILSKNCRVSTVNCTSCCVIPVSLEIQVLWAHLGLQSNPQAH
                     VAGARFLYQCKSVQELQRGIEVSLMTLVNFMDLTQKPEPPRDQPRPDWKLPFDFFFPF
                     KVAFSRGASVQKDSSSLILILCVFLLGLLNSQT"
     exon            289..412
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            413..531
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            532..659
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            660..768
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            769..884
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            885..920
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            921..1001
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            1002..1127
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            1128..1235
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            1236..1330
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            1331..1484
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            1485..1622
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
     exon            1623..3562
                     /gene="Tctn3"
                     /gene_synonym="RGD1305166"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggatctatc tggagactcg ggctcctgtc gcacccctct gcggcccggc tgccttatgt
       61 gcactccgca gctgctgctg ctgctgctgc tgctgctgct agtgggcctg atgctttctg
      121 acgccgcccg gccgcagccc tcctccacag cccgggctct gcctacctcc tgggtcctgg
      181 ggccagtgac gcccgaagta ccaactacag cgcctccaga cttgtctgag agtcctaccc
      241 cctggacact atcgatgccc gagaacgcga ccaccgaccc cttcccagcc ttatcgatct
      301 gtgtctgtga cttgactcct ggtacctgcg atttaaactg ctgctgcgat aaggactgcg
      361 atcttctcca tcccagaaca gtcttttcct tctgccttcc tggtagtgta agatcttcaa
      421 gttgggtatg tgtggacaac tccctggtct tcaggagcaa ctccccattt ccttccagag
      481 ttttcacgga ctccagtgga atcacacaat tttgcgtccg tgtgaacaac tcaaaatcaa
      541 actatttcca ggagctccaa acagtcaatg caaccaactt ccaggccctg gctgcagagt
      601 ttggaggcca gttcttcacg tcaacaccga aaacccagcc gccagggcca ttctataggg
      661 ctggggatcc catcctgatc tactacccag gcttgtccgt agtgagccta ctgcggcagc
      721 ctgcagcggt gggagctggg ggactttgtg ctgagagcaa tcctgcaggt ttcctagaga
      781 gcaaaagcac aacgtgtgct cgtttcttca aggacctgac cagtagctgc acctcggaac
      841 cagccctgga tgctgcctct taccataact tcagagtcct gaaggttcca agagctatga
      901 ctgatcttca gagtatgaag ttccaggttc ctgtgacact tgcctcacaa accagccctc
      961 ctctgttggc tggcaacacg tgtcagaata ttgtttccca ggtcatctac gagatagaga
     1021 ccaatgggac ctttgggatc cagaaagtct ctgtcagctt cagacagacc aacctgactg
     1081 tcaagccagg tgtttctcta cagcaggact tcatcattca cttcagggca tttcaacaga
     1141 gagaggctgc ttctcctgct gctccgagaa gtgggaatcc tggctacctc acggggaagc
     1201 cactcttggt gctaactggt gacctaagtc actctatgac cctgttgcag agcgagggta
     1261 atggcctttg ctctgctaag aggcacgaag tacagtttgg agtgaacaca gtgtcggggt
     1321 gccagttaag acccaaagag gtgaactgca gccacttgca ggaggagatt taccagactc
     1381 tccatggaag gcccagacca gagcacgttg ccatcttcgg taacgctgac ccagcccaga
     1441 aaggagggtg gaccaggatc ctcagcaaga actgccgtgt ttcaacagtt aactgcactt
     1501 cctgctgcgt gataccagtg tccctggaga tccaggtgtt gtgggcacat ttaggacttc
     1561 agtccaaccc acaagctcat gtggcaggag cccgattcct gtaccagtgc aagtctgtac
     1621 aggagctcca gaggggaata gaagtatctt tgatgactct cgtgaacttt atggacctta
     1681 ctcagaagcc agaaccgcca agggatcaac ctagaccaga ctggaaactg ccattcgatt
     1741 tcttctttcc cttcaaagtg gcgttcagca gaggggccag tgttcagaaa gactcgtcct
     1801 ctctcatcct catcctgtgt gtctttctac ttggacttct caactcacag acctagtgaa
     1861 gaaaggaaat aatcaggttt catttttccc tgtgggaaac taaagacagc ctactgatct
     1921 tggctaaaca ggtctggctt actcgtgctt acaggacgga atttagggaa acagaaccta
     1981 acaaaagaat tttttttttc ctttccattt tctcattatg taaccttggt ggcctagaac
     2041 tcccaatgta gaccaggccg gcttcagatg cacagagatt tccccctgcc tctgcctctg
     2101 aagtgctagg attaaaggca tgtgccatca tgcccagcca ggaatcttta taaattaaag
     2161 gtggcatgtt agaaaaacga ttataaatat tctatcatca tagctctcct cttcgggctc
     2221 ctcaggtctc aaggtacaca ctgtgttctc tgcttctaaa gctgggcagg tcaagagcct
     2281 tgtctcttca cattgtgtct gttcatgttg catcccttca cgttgtgtct cgcctctaat
     2341 aaatgtttgc agggtccact cacaggcatg tgctcctgcc attcacccag agtgaactca
     2401 gagtgcatta gtgctgacaa tttgagccag gaaactgctg gctctgtatt ttgtctggct
     2461 cttttgccaa agtatagcca caccctttgc ccagacctga gttgggagag ttgttctttc
     2521 tactcgtttt ccaacgtgaa tggagttcca tatccttttc tcgctagcga atgaccccac
     2581 cagtcctttc tgttcttccc tacttggtgg tgtggggtaa taaaagtgac tgagagcaag
     2641 tccagtagca tggcagaagt tgacacccca tgatacacac cccgagtatt tttacatgta
     2701 tgagatttaa agggggaacg agaaccctca taaactgtcc agtagcattt gaatcagggg
     2761 acttcttttc tggggaaata ttctcctttg gtccaatttt atgcccgtga cttctgttga
     2821 agcctgtttc tttaagggta agaaagactt cgttagctcc cacagagccc tgcctgtctg
     2881 gccgatccac agaagtagca cgtacagaga ccgacttctt gagcttattt cctcttcttg
     2941 aatggaaaca aattagttga gaattattgt agaaaactta aagactcatg ctgtcctttt
     3001 aattaaggca aggttttgat ggaagaaatg acattaggtc taattatttt aaacataagc
     3061 cttggaatga ggcagtaaat agaatgagtt aggatgcaaa agaatgactc tggtgaaacc
     3121 gtgtgaaacg tgcagttcta aggcaccgcc ccctctgagt gacgtgcacc gctggagcca
     3181 gacagccagt gtggcttttc ctgatgggtg agctttctag tcaggttggc ctggcctggg
     3241 aaagtggatg ggagggggaa ggacctgagg acaacctgag gggaggcaca ggcatttctg
     3301 tggattaaag tgatcctagg aagcgatgga agtttgcatt gtgggaattt gaaagccagg
     3361 cagagagggt tggaggttat taatactctg aaacccaaat tgtttttgat tgttcatttg
     3421 tttgtttttt tcgagactgg tttctttgga tagtctggct atcctggacc ttgatttgta
     3481 aaccaggctg accttgaact catggagaac tactttcctc tatctcctga gtactgggat
     3541 taaaagcatg tgccaccacc ac
//
