LOCUS       NM_001401234            1633 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus T-cell leukemia translocation altered (Tcta),
            transcript variant 1, mRNA.
ACCESSION   NM_001401234
VERSION     NM_001401234.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Kotake,S., Nanke,Y., Kawamoto,M., Yago,T., Udagawa,N., Ichikawa,N.,
            Kobashigawa,T., Saito,S., Momohara,S., Kamatani,N. and Yamanaka,H.
  TITLE     T-cell leukemia translocation-associated gene (TCTA) protein is
            required for human osteoclastogenesis
  JOURNAL   Bone 45 (4), 627-639 (2009)
   PUBMED   19560569
REFERENCE   2  (bases 1 to 1633)
  AUTHORS   Aplan,P.D., Johnson,B.E., Russell,E., Chervinsky,D.S. and
            Kirsch,I.R.
  TITLE     Cloning and characterization of TCTA, a gene located at the site of
            a t(1;3) translocation
  JOURNAL   Cancer Res 55 (9), 1917-1921 (1995)
   PUBMED   7728759
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.46604.1,
                                           SRR22582419.1128502.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840111, SAMN12840119
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-254               JAXUCZ010000008.1  117869859-117870112 c
            255-357             JAXUCZ010000008.1  117869477-117869579 c
            358-1633            JAXUCZ010000008.1  117867153-117868428 c
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..1633
                     /gene="Tcta"
                     /note="T-cell leukemia translocation altered"
                     /db_xref="GeneID:306587"
                     /db_xref="RGD:1359333"
     exon            1..254
                     /gene="Tcta"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..400
                     /gene="Tcta"
                     /note="isoform 1 is encoded by transcript variant 1;
                     T-cell leukemia translocation-altered gene protein
                     homolog"
                     /codon_start=1
                     /product="T-cell leukemia translocation-altered gene
                     protein homolog isoform 1"
                     /protein_id="NP_001388163.1"
                     /db_xref="GeneID:306587"
                     /db_xref="RGD:1359333"
                     /translation="MAEPWAGQFLQALPATVLGALGTLGSEFLREWETQDMRVTLFKL
                     LLLWLVLSLLGIQLAWGFYGNTVTGLYHRPDSHPQPPAALGVFLPPGLGGQNGSTPDG
                     STHFPSWEMAANEALKTHRE"
     exon            255..357
                     /gene="Tcta"
                     /inference="alignment:Splign:2.1.0"
     exon            358..1633
                     /gene="Tcta"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacagtacac ccggtggggc gctggccagt catggcggag ccttgggctg ggcagtttct
       61 gcaagctttg cccgccacgg tgctcggagc gctgggcacc ctgggcagcg agtttctgcg
      121 ggagtgggag acacaagata tgcgagtgac tctcttcaag cttctcctgc tttggttggt
      181 gttaagtctc ctgggcatcc agctggcgtg ggggttctac gggaacacag tgaccgggtt
      241 gtatcaccgt ccagattccc accctcagcc tcctgcagct ctgggtgtgt tcctgcctcc
      301 aggtctgggt ggccagaatg gatccacacc tgatggctcc acacatttcc cttcatggga
      361 aatggcagca aatgaagctc tcaaaactca cagagaataa aggaaggcag caggagaagg
      421 gtctccagag atatcgctgg gtctgctggc tcctgtgctg taccttgctg ctatccagac
      481 cccttaggca actgcagagg gcttggggtt gggggactgg agtaccatga tgctcccagg
      541 gtgagcctcc actgccctca gccttgcctc caacagcgtc aggtactggg caggtgaagt
      601 ttgtctccaa caaacggaaa gccttcttgt caaggtcata gctgagaaac attttggttg
      661 aggaggtcag tagtcccttt tctcaccttg gctttttcct gacttactca tccccttggg
      721 gatgtgatct taagagtagt ttgtctttgt aagagaaatc ttgaggttag ccagttctga
      781 gatttagaag gaaagtccat tctcccatgg gccctgattt ccttgacctc gctttgtagg
      841 cagaaagcca gctaatcctg gcctggatga gggcaccaaa cctgtccctc cctggcccat
      901 ctagaattgt ccaggtctga ggcaggcgag gaagttatca cttcccaacg gacttatttc
      961 tgttcttttt gaggacaagt tgagtccctg agacatctca ctaagagccc ctggcattgg
     1021 ctagcttctc cactgtttca gtacccacag gcttctttgg tctgtactcg cccccgccta
     1081 gggaggtact aagcagttag tgcagtgact tcattgtgcc ctgctgcctt attacttccc
     1141 atcttgagaa gggcctcgcc ctgagagtcc accagcatca ttttagcccc taggactatc
     1201 agtaagagtg agctgcaagc cagatagttg tggaccctcc cccaaggggg tgggtggcca
     1261 atgtccccat gaaaacacca catcctgaga gcactatggt tcctaagagc attgtggtct
     1321 tggatctgcc tcctctaatg gttgtactcc tgtctctgct gggctactag ctacctcagg
     1381 tgtccactgt ctttgttaga tgtcacatag ccacctggca gccattgcct acagggactt
     1441 tgtagcaggt gtactgtggg tgaaactatg gagctcctcg tgcacatgta cctactccag
     1501 agatgtcatc tgtgtggcag aaagatgttc ttcacagcct catgcccacc cactgacatc
     1561 actacaagag tcaaggtctc acattccacc ccaggagcaa ctgaagatgt gacttattaa
     1621 acacagaagt gca
//
