LOCUS       XM_001067558            4847 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transcription factor 23 (Tcf23), mRNA.
ACCESSION   XM_001067558
VERSION     XM_001067558.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001067558.7.
            
            On Jan 21, 2021 this sequence version replaced XM_001067558.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4847
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4847
                     /gene="Tcf23"
                     /note="transcription factor 23; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     ESTs, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 8 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:688600"
                     /db_xref="RGD:1586500"
     CDS             911..1558
                     /gene="Tcf23"
                     /codon_start=1
                     /product="transcription factor 23"
                     /protein_id="XP_001067558.2"
                     /db_xref="GeneID:688600"
                     /db_xref="RGD:1586500"
                     /translation="MSREATEAPAMPEAGRNKPKARLLLGTDRKRSRLNRTRQDLWDD
                     TSWSNHRLSRVTSAPRRTRARGTAHGRSEASPENAARERTRVKTLRQAFLALQAALPA
                     VPPDTKLSKLDVLVLATSYIAHLTRTLGHELPGPAWPPFLRGLRYLHPLKKWPMRSRL
                     YAGGLGCSGPESTTADSTTTIATDHRSRDAQLGSQVSVATDSLLASPVSPALGNE"
ORIGIN      
        1 gcagagaaag gacaagttcc tgtgggctct tttgtgtcat ccttgtaatg caaatctagc
       61 ctctgcactg gccagattca acttctaaag ggctctgaac ggatgcttct ggaagaaggc
      121 ctctctgaga ccgagaacat catgctgaga gctaagagaa cttgtccctc attccgcggg
      181 catcttaccc tatttactgg atttgacatt gtactgtaaa ctcaacactt ggggaactga
      241 ggctaaagga cttccgtgtg tgcaaggcca gcaagtttct ggtggtgggc ggggttaaag
      301 tcctgtaagt gaaactcaga gtcctaaaga tggcatcttt ctcctggaag tgtgggagga
      361 aggcccgagg gcatggaaag gcagaaattg aaattgggaa gcacgtttga ggagttggga
      421 gtgcacccct tgcatgtgtt ttggtggaag gaagaaaggc tgtagtggga tgcatatcga
      481 cagtctctgg cacaagggct ggagatccag agccctaaac cgtgaacttg agccccaaac
      541 ttgaagggtt ggtccatcag aggattactc tgtcagggtc ggtcatggca tggaagggca
      601 ctctcttcct aaccgatctt cctgccttct aagcatgggc cttgacctag ggcttggccg
      661 ctcccagcat gcagtgcccc cacccctcag ccgggacggg aggcaggcgg aggctttttg
      721 cgggggctgt gctgggtggg cagttttccc agagcaagga gtgaagtagg actgagttgg
      781 cgccagctcc ttcagataca gacattgctg gctggatggc caccctgtca gggcgagctt
      841 gagcccaagg ctccctcggg tactgtgtcc ctgctttagg gcctaccgct ccatacctca
      901 ggatagcggc atgtcacggg aggccacaga ggcaccagca atgccggaag cagggcgtaa
      961 taagcccaag gcacggttgc ttctgggcac tgacaggaag aggagccgcc tcaacaggac
     1021 aaggcaggac ctgtgggacg acactagctg gagcaatcac agattgagca gagtcacctc
     1081 tgcccctcga aggaccagag ctagggggac agctcatggc aggagtgagg ccagcccgga
     1141 gaacgcagca cgggaacgga ctcgggtgaa gacactgcgt caggcctttc tggcgctgca
     1201 ggctgctctg cctgcagtac cacctgacac caagctttcc aagttggatg tgctagtgct
     1261 ggccacaagc tacatcgccc acctcacccg aaccctcggc catgagttgc ctggtcctgc
     1321 ctggcctccc ttcctgcgtg ggctccgtta cttgcaccct cttaagaagt ggcccatgcg
     1381 atctcgtctc tatgcaggag gcttgggatg ctctggcccg gagtccacca cagccgattc
     1441 caccacaacc atcgctactg accacagaag cagggatgca cagctggggt ctcaggtctc
     1501 cgtagccaca gatagcctcc ttgcctctcc agtctctcca gcccttggta acgaatgacc
     1561 accaccactc atcctgctct cttagactgc gactccgctt aaggacctgg attttctgcc
     1621 cgctctgcct gtcttcccct tgactcagcc tttgggtttg actcaggctc aagtttcaag
     1681 ttcagggttg gcttccggta ggcagaagaa gcagcagtaa agacatcagt ggtagagagt
     1741 tccgaggaga cccaggatgg agttcacgct tggctcttct acggtactga cggacgggaa
     1801 gtgaaagaga aaccgtgttt gacgtggttc aaagtcaagt tagggcatca catcccctcc
     1861 cctagggctc ttcaagaaga acacaagaag acagaaatgg ctgtgccggt acagcatggg
     1921 gctaggacca cagtagccct gggtgctcat gggcatacca gggggcctga agggcttttg
     1981 gtagcagtaa gtatgaacat gtctggggtc aggtcacaaa gccagagagg aagctggaga
     2041 atggagtgtg gtttttttct ttaatttccc tacaagatgt ttatccaaca tcaaagaggc
     2101 gtaggcgaga tcagggtact tctccctgga ataccatctc accagtgggc cctcatcacc
     2161 tccttcctgc accagggccc tgcagccctt tcacgtcttc ccagcagatg aagccccaga
     2221 cttagatggc tcacaagcca gggacattta gctagtccca gctatctagg gccagatcat
     2281 cttatcccac agtcagctct gccttcactc aacgaagcag ccactcacag ccctgcctgc
     2341 agaggaccgc aatctcccca gctttatctc ctccaagggc ctgagacaga gcgagagcat
     2401 ctctcccgtg gcatagtaag cagtgttctc tctctggtgt gttagaaacc tcatctcaag
     2461 gacgtgtaaa acaaggtgga cttcagcgtg gttcctgcac tgtcagcgat gggggcttta
     2521 ctggttttgg tataatctga acatttctaa aggtcaactc ccaggcctgc ttctccccac
     2581 aggcagtgac gtcccaggct tgccccagat cctggtacaa ggtgcccaaa gtttcctaga
     2641 gctttagcga cactcgtcct tggccctgaa gaaataactg gagacaaagc ttacactaag
     2701 gtgagcttcc caagccaggt ccagtttcag gttggcccct gggtcttaac ataggaggaa
     2761 ctgccttcct ctcaaatttc agcaactgag gccaactaga gtcccagcag ggtgctcatg
     2821 agttgagtgg acaggctggg agggattggc atccaggaaa aggagatggt ggggtgactc
     2881 agcaagctgg ggtggagata gaaggaagac acagaacgtc ccagcctcag ctgcatgtgc
     2941 tgtggggaag cagctgggct gtggctgaga gccatggcgg acggccccag ccaaggccaa
     3001 acccataaat ctgcctggtc ccacatttct cctgggggac ccagagaact tgtgcagggc
     3061 tggtccagca gctggacggg gccaagcagg ggcagagacc aggtgtggga gggcaggagc
     3121 agtcttcttc acacgaccat aaaagtccag cctgggtgtt ctatttttaa aaccaaatca
     3181 acagcagcgt ccccccgccc tccgtggagt tgaagggtgg taaaaaggag tgtacatgat
     3241 ttcttcccag tcagtgatat acgatctgtc tctgggcagg ctggggactg gctttgggta
     3301 caagctacga gtcccctcat agactaaagc atctcccagt gattgagtag agtctgatgg
     3361 agcttgaagt gtccaccctg tctagactca agcttttgcc tcatttggca aacccttcac
     3421 ggctgaccac ataacaccgc cctaatggag aatctgagga gggaaaaaga agatgaagtt
     3481 ggtagagggt caggtaaaga agaacaagtc ccaccaggag gagtatcttg ttttggtttg
     3541 gtttggtttg gttttttgac atgactttct gtgtaggcca ggctggcttt gaacttgaaa
     3601 tccttctgcc ttagcaaggg ttatgggctc acaggccttt accactctgc ccaatcagga
     3661 caaatttcta aatctgttgc cagagaatct gtttttccca ctgaccaggc ctggcactgt
     3721 caagctgagg ttacctgact gtggggaggg gaaccaaagg aagacccagg gcatgactgg
     3781 aacctcactc tccctgccca gcacaatgct tcccttgaga aataccacac tggagatgct
     3841 ggagacgctg gagatgaggg tctgtaagcc aagcccaccc aggaacgacc ccttttgttt
     3901 ccacagcaga gaaagaaaag catctgctga ctgggagatc tatgctcacc cgcgctaggg
     3961 gcaaagtggt aggagcgttt ggaggcagta gaaggagccg aactctgtct ccaacaacag
     4021 ctcctgttcc ctaggacggg cacgtacagg ggagagtatg caaaagttaa ggtgcatgga
     4081 tggacggtgg tgtgcgggtg ccctggcccg ggagtcggag ggatggctgc accctgtgaa
     4141 cctagtccag ttttctttca gtccctctca aggtgaggtg caggtagaga ggaagacttc
     4201 cctgttgcct ccctccactc atctggctgt gctgcaagag atcagtactg aggcttacat
     4261 ggagccccgg gagggctcgt ccagcacagc gaaggagttc ccctttggag actgtgggaa
     4321 cagacaatgg ctaatcttga ctgtcaactt ctttggactg agaggtgacg agggggttag
     4381 taaagtggac ctttgtgtat gaggactttt acctcctgaa tagcttagtc catggatgga
     4441 ttcaaaatag gctattgata agctgggtgt ggtgctatat gcccttaatc ccaacattca
     4501 gaaggcagag gcaggaggat ctttgtgagt tgaagaccag ccaggccaac ctagtgggtc
     4561 tcagtggaat tgtggacagg ctggagggag ggggctgggg ccacgtgctt gaggctgtgt
     4621 attgtccctg actctttccg tgtaactgcc gcactgctgc cccatctgcc tcgagaaaaa
     4681 agatgtccct tccacatact cccgatacca tgatgttctg cccctaacca tgacaccaaa
     4741 aagcctgtgg actgagctct ctgagacttt ggaccaaaat aaatctttcc tactcgacat
     4801 tgtctctatc cagaatttgg ttacagcggt gtggactcta ataaaaa
//
