LOCUS       NP_001124046            1970 aa            linear   ROD 24-JUN-2024
DEFINITION  transcription factor 20 [Rattus norvegicus].
ACCESSION   NP_001124046 XP_001077683 XP_345862
VERSION     NP_001124046.1
DBSOURCE    REFSEQ: accession NM_001130574.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 1970)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   2  (residues 1 to 1970)
  AUTHORS   Rekdal,C., Sjottem,E. and Johansen,T.
  TITLE     The nuclear factor SPBP contains different functional domains and
            stimulates the activity of various transcriptional activators
  JOURNAL   J Biol Chem 275 (51), 40288-40300 (2000)
   PUBMED   10995766
REFERENCE   3  (residues 1 to 1970)
  AUTHORS   Szpirer,C., Van Vooren,P., Riviere,M., Scohy,S., Collau,G. and
            Szpirer,J.
  TITLE     Localization of 54 rat genes, and definition of new synteny groups
            conserved in the human and the rat
  JOURNAL   Mamm Genome 11 (9), 729-735 (2000)
   PUBMED   10967130
REFERENCE   4  (residues 1 to 1970)
  AUTHORS   Lyngso,C., Bouteiller,G., Damgaard,C.K., Ryom,D., Sanchez-Munoz,S.,
            Norby,P.L., Bonven,B.J. and Jorgensen,P.
  TITLE     Interaction between the transcription factor SPBP and the positive
            cofactor RNF4. An interplay between protein binding zinc fingers
  JOURNAL   J Biol Chem 275 (34), 26144-26149 (2000)
   PUBMED   10849425
REFERENCE   5  (residues 1 to 1970)
  AUTHORS   Sanz,L., Moscat,J. and Diaz-Meco,M.T.
  TITLE     Molecular characterization of a novel transcription factor that
            controls stromelysin expression
  JOURNAL   Mol Cell Biol 15 (6), 3164-3170 (1995)
   PUBMED   7760812
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473950.2.
            
            On or before Jul 28, 2008 this sequence version replaced
            XP_345862.3, XP_001077683.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760389,
                              SAMEA5760434 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     Protein         1..1970
                     /product="transcription factor 20"
                     /note="stromelysin-1 platelet-derived growth
                     factor-responsive element binding protein"
                     /calculated_mol_wt=214189
     Region          1737..1964
                     /region_name="ePHD_TCF20"
                     /note="Extended PHD finger (ePHD) found in transcription
                     factor 20 (TCF-20); cd15699"
                     /db_xref="CDD:277169"
     Site            order(1918,1927..1931,1937,1959)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277169"
     CDS             1..1970
                     /gene="Tcf20"
                     /gene_synonym="AR1; SPBP"
                     /coded_by="NM_001130574.1:185..6097"
                     /db_xref="GeneID:366964"
                     /db_xref="RGD:1594486"
ORIGIN      
        1 mqsfreqssy hgnqqsypqe vhsssrieef sprqaqmfqn fggagggssg tgssssgrrg
       61 taataaamas etsghqgyqg frkeagdfyy magnkdtvaa gtpqppqrrp sgpvqsygpp
      121 qgssfgnqya seghvsqfqa qhsalggvsh yqqdytgpfs pgsaqyqqqa ssqqqqqqqq
      181 qqqqqqqqqq qqqqqqqvqq lrqqlyqshq plpqatgqpa sgsshlqpmq rpsalpssag
      241 yqlrvgqfgq hyqssassss ssfpspqrfs qsgqsydgsy svnagsqyeg hnvgsnaqay
      301 gtqsnysyqp qsmknfeqak ippgsqqgqq qpqqqpqpqq qqqqqppqqq qqqqhppqhv
      361 mqytnaatkl plqsqvgqyn qpevpvrspm qfhqnfspis npspaasvvq spscsstpsp
      421 lmqsgenlqc gqgnvsmssr nrilqlmpql sptpsmmpsp nshaagfkgf glegvpekrl
      481 tdpglsslsa lstqvanlpn tvqhmllsda ltpqkktskr psssskkads ctnsegssqp
      541 eeqlkspmae sldggcssss edqgervrql sgqstssdtt ykcgasekag ssptqgaqne
      601 aprlstspat reeaaspgak dtslssegnt kvnektvgvi vsreamtgrv eksggqdkss
      661 qeddpaasqr ppsnsgvkem shtslpqsdp lgggskgnkn gdnnssnhng egngqsshsa
      721 vgpsftgrte pskspgslry sykesfgsav prnvsgfpqy psgqekgdfg shgerkgrne
      781 kfpsllqevl qgyhhhpdrr yprsaqehqg masglegtar pnilvsqtne ltsrgllnks
      841 igsllenphw gpwerkssst apemkqinls dypiprkfei epsssshepg aslserrsvi
      901 cdisplrqiv rdpgahslgh mgadarigrn erlnpslsqs vilpgglvsm etklksqsgq
      961 ikeedfeqsk sqasfnkksg dhchptsikh etyrgnaspg aaahdsisdy gpqdsrstpm
     1021 rrvpgrvgsr etmrgrsssq yhdfaeklkm spgrsrgpgg dphhmnphmt fseranrssl
     1081 hapfspnses lasayhtntr ahaygdpntg lnsqlhykrq myqqqqeeyk dwasssaqgv
     1141 iaaaqhrqeg prksprqqqf ldrvrsplkn dkdgmmygpp vgtyhdpstq eagrclmssd
     1201 gmpaksmelk hssqklqesc wdlsrqtspa kssgppgmsn qkrygpphep dghglaestq
     1261 sskpsnvmlr lpgqedhssq nplimrrrvr sfispipskr qsqdvknsnt ddkgrllhps
     1321 kegadkvyns yshlshsqdi ksipkrdask dlpnpdnrnc pavtltspak tkilpprkgr
     1381 glkleaivqk itspnirrsa sansaetggd tvtlddilsl ksgppeggtv anqeaemekr
     1441 kgevvsdlvs atnqesnvek plpgpseewr gsgddkvkte ahvetastgk epsgtmtsta
     1501 sqkpggnqgr pdgslggaap lifpdsknva pvgiltpean pkteekendt vmispkqesf
     1561 ppkgyfpsgk kkgrpigsvn kqkkqqqqpp pppqppqmpe gsadgepkpk kqrqrrerrk
     1621 pgaqprkrkt kqavpivepq epeiklkyat qpldktdakn ksffpyihvv nkcelgavct
     1681 iinaeeeeqt klvrsrkgqr sltpppsste skvlpassfm lqgpvvtess vmghlvcclc
     1741 gkwasyrnmg dlfgpfypqd yaatlpknpp pkrstemqnk vkvrhksasn gsktdteeee
     1801 eqqqqqkeqr slaahprfkr rhrsedcggg prslsrglpc kkaaaegsse ktasdtkpsv
     1861 pttseggpel elqipelpld snefwvhegc ilwangiylv cgrlyglqea leiaremkcs
     1921 hcqeagatlg cynkgcsfry hypcaidadc llheenfsvr cpkhkvrlwr
//
