LOCUS       NM_001168579            1000 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus transcription factor 15 (Tcf15), mRNA.
ACCESSION   NM_001168579 XM_230722
VERSION     NM_001168579.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Rowton,M., Ramos,P., Anderson,D.M., Rhee,J.M., Cunliffe,H.E. and
            Rawls,A.
  TITLE     Regulation of mesenchymal-to-epithelial transition by PARAXIS
            during somitogenesis
  JOURNAL   Dev Dyn 242 (11), 1332-1344 (2013)
   PUBMED   24038871
REFERENCE   2  (bases 1 to 1000)
  AUTHORS   Muir,T., Wilson-Rawls,J., Stevens,J.D., Rawls,A., Schweitzer,R.,
            Kang,C. and Skinner,M.K.
  TITLE     Integration of CREB and bHLH transcriptional signaling pathways
            through direct heterodimerization of the proteins: role in muscle
            and testis development
  JOURNAL   Mol Reprod Dev 75 (11), 1637-1652 (2008)
   PUBMED   18361414
REFERENCE   3  (bases 1 to 1000)
  AUTHORS   Burgess,R., Rawls,A., Brown,D., Bradley,A. and Olson,E.N.
  TITLE     Requirement of the paraxis gene for somite formation and
            musculoskeletal patterning
  JOURNAL   Nature 384 (6609), 570-573 (1996)
   PUBMED   8955271
REFERENCE   4  (bases 1 to 1000)
  AUTHORS   Zhang,L.Y., Levitt,R.C. and Kleeberger,S.R.
  TITLE     Differential susceptibility to ozone-induced airways
            hyperreactivity in inbred strains of mice
  JOURNAL   Exp Lung Res 21 (4), 503-518 (1995)
   PUBMED   7588439
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000003.1.
            
            On Dec 10, 2009 this sequence version replaced XM_230722.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582416.154520.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-576               JAXUCZ010000003.1  161099301-161099876
            577-1000            JAXUCZ010000003.1  161104660-161105083
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q41"
     gene            1..1000
                     /gene="Tcf15"
                     /note="transcription factor 15"
                     /db_xref="GeneID:296272"
                     /db_xref="RGD:1308464"
     exon            1..576
                     /gene="Tcf15"
                     /inference="alignment:Splign:2.1.0"
     CDS             64..651
                     /gene="Tcf15"
                     /codon_start=1
                     /product="transcription factor 15"
                     /protein_id="NP_001162051.1"
                     /db_xref="GeneID:296272"
                     /db_xref="RGD:1308464"
                     /translation="MAFALLRPVGAHVLYPDVRLLSEDEENRSESDASDQSFGCCEGL
                     EAARRGPGPGSGRRASGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPV
                     DRKLSKIETLRLASSYIAHLANVLLLGDAADDGQPCFRAAGGGKSAVPAADGRQPRSI
                     CTFCLSNQRKGGSRRDLGGSCLKVRGVAPLRGPRR"
     exon            577..1000
                     /gene="Tcf15"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagcgcaca ccgggggcgg cggctcgggg accaggcgag cggaggcccg cggccgggcg
       61 cccatggcgt tcgcgctgct gcgcccggtc ggcgcgcacg tgctgtaccc ggacgtgcgg
      121 ctgctgagcg aggacgagga gaatcgcagc gagagcgacg cgtcggacca gtcgttcggc
      181 tgctgcgaag ggctggaggc ggcacggcgt ggcccaggtc ccgggagcgg gcggcgggcg
      241 agcggcggcg cgggccccgt ggtggtggtg cggcagcgac aggcggccaa cgcgcgcgag
      301 cgagaccgca cgcagagcgt gaacacggcc ttcaccgccc tgcgcacgct catccccacc
      361 gagcccgtgg accgaaagct gtccaagatc gagacgctgc gtctggcgtc cagctacatc
      421 gcccacctgg ccaacgtgct gctgctgggc gacgcggcag acgatgggca gccgtgtttc
      481 cgcgcggcgg gcggtggcaa gagcgcggtc cccgccgccg acggccgtca gccgcgctcc
      541 atctgcacct tctgtctcag caaccagcgc aaggggggca gccgtcgtga cctggggggc
      601 agctgcttga aagtgagggg tgtagccccc ctccgagggc ctcggagatg aacctggggt
      661 ccccacagtg ttttctccaa gaaggactcc agagaaagag acctcgagcc agcccctagc
      721 tggagagggg agaagattcc agaagcccaa accactcctg cttcgtgtag ggaccagagg
      781 acaatggcct ggatacaggg ctcaccctcg agagccacaa ggaccaatct agccatctag
      841 gccaaggtgg ccaaggacaa ggcagaaatt ttagaaaacc aaagactgtt tttgaaagcg
      901 tgtgtgtgtg tgtgtgtgtg tgtctgtgtg tctgtgtgtc tgtgtgaatg tgatatgtga
      961 gcgaatcagt gggatcgaaa taaaggtatt tttaaataaa
//
