LOCUS       NM_001127502            1060 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus transcription elongation factor A like 9
            (Tceal9), mRNA.
ACCESSION   NM_001127502 XM_001056814 XM_215278
VERSION     NM_001127502.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Bedford,M.T., Chan,D.C. and Leder,P.
  TITLE     FBP WW domains and the Abl SH3 domain bind to a specific class of
            proline-rich ligands
  JOURNAL   EMBO J 16 (9), 2376-2383 (1997)
   PUBMED   9171351
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Mar 15, 2021 this sequence version replaced NM_001127502.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166897.1, FQ220910.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-184               JAXUCZ010000021.1  104037274-104037457
            185-250             JAXUCZ010000021.1  104037932-104037997
            251-1060            JAXUCZ010000021.1  104038536-104039345
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq32"
     gene            1..1060
                     /gene="Tceal9"
                     /gene_synonym="RGD1560111; Wbp5"
                     /note="transcription elongation factor A like 9"
                     /db_xref="GeneID:680354"
                     /db_xref="RGD:1592975"
     exon            1..184
                     /gene="Tceal9"
                     /gene_synonym="RGD1560111; Wbp5"
                     /inference="alignment:Splign:2.1.0"
     exon            185..250
                     /gene="Tceal9"
                     /gene_synonym="RGD1560111; Wbp5"
                     /inference="alignment:Splign:2.1.0"
     exon            251..1060
                     /gene="Tceal9"
                     /gene_synonym="RGD1560111; Wbp5"
                     /inference="alignment:Splign:2.1.0"
     CDS             285..599
                     /gene="Tceal9"
                     /gene_synonym="RGD1560111; Wbp5"
                     /note="WW domain-binding protein 5"
                     /codon_start=1
                     /product="transcription elongation factor A protein-like
                     9"
                     /protein_id="NP_001120974.1"
                     /db_xref="GeneID:680354"
                     /db_xref="RGD:1592975"
                     /translation="MKPCQKMEGNLEKENEPKPEEEPKPEEKPEEGEEPDEEEKSEET
                     FRERLIQSLQDFKEDIHNRHLSSEDMFRDVDELDEIRRVRNKLIVMRWKANRSHPYPY
                     LM"
ORIGIN      
        1 gggagtggag attggggacc ggagctcact ggtgacgtag atctcatgtg accaggagtc
       61 gacgtgtgca gaaatcctgc tagtctggtc cttgtttcca tctgggtacc agctcccttc
      121 agccttgcag gcggtggtgt gagaggccag cggcaagagg agacagcttg cttgaattca
      181 gcaggtttgt tttttgtacc gctccagcct aaaataagta ggaaaaagag atcgaccaga
      241 tccgtacctg ggagccgcaa agaaggaaga gaagcataca caagatgaaa ccctgccaaa
      301 aaatggaagg aaacctagaa aaggagaatg agccaaagcc tgaggaagag ccaaagcctg
      361 aggagaagcc agaggagggg gaggaaccag acgaggagga aaaatcagaa gaaacttttc
      421 gggagaggct gattcagtct cttcaggatt ttaaggagga tatacacaac aggcatctga
      481 gcagtgaaga tatgtttaga gacgtggatg agctagatga gatcaggaga gtgagaaaca
      541 aactaatagt gatgcgttgg aaggccaatc gaagccatcc ttacccctat ttaatgtagc
      601 ttggcttggt ttccttttta tctgctgtta ccattgcaat ctagctttct tttgattagc
      661 attttcctgc taagaccttt gcccatcttc ctgcgttgaa tctgttgctg ttagtggctt
      721 tagcgatctc tcttgttgtc tgtatcttac tgttgattgt atttgaacca atctataagt
      781 ctctggcttt taaccgaaga gctttactga tttgtaaaaa aaaaaataca aacatgagct
      841 tctgatggga aacaaaatga gaaaagatta caaaataata tgggaatatc atattttgag
      901 agacaggagt ccctttgtat gttacatata tgcacatata aacttgtgaa agatgaatga
      961 tttttcttct gcttatttgt atttgccata ttcctaaaat gaacacgcat tattcttgct
     1021 aaaaataata aaggttttat aactaaaaag aagcatccaa
//
