LOCUS       NM_001408868            1062 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus transcription elongation factor A like 6
            (Tceal6), mRNA.
ACCESSION   NM_001408868 XM_003749245
VERSION     NM_001408868.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Jun 29, 2022 this sequence version replaced XM_003749245.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ213604.1, SRR26643298.32520.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840109, SAMN12840110
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-106               JAXUCZ010000021.1  102632664-102632769 c
            107-173             JAXUCZ010000021.1  102632044-102632110 c
            174-1062            JAXUCZ010000021.1  102630844-102631732 c
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq32"
     gene            1..1062
                     /gene="Tceal6"
                     /note="transcription elongation factor A like 6"
                     /db_xref="GeneID:679974"
                     /db_xref="RGD:1598096"
     exon            1..106
                     /gene="Tceal6"
                     /inference="alignment:Splign:2.1.0"
     exon            107..173
                     /gene="Tceal6"
                     /inference="alignment:Splign:2.1.0"
     exon            174..1062
                     /gene="Tceal6"
                     /inference="alignment:Splign:2.1.0"
     CDS             200..799
                     /gene="Tceal6"
                     /note="transcription elongation factor A protein-like 3;
                     transcription elongation factor A (SII)-like 6"
                     /codon_start=1
                     /product="transcription elongation factor A like 6"
                     /protein_id="NP_001395797.1"
                     /db_xref="GeneID:679974"
                     /db_xref="RGD:1598096"
                     /translation="MEELHGENEGKLEKEGKPEDEVEPEDEEKSDEEEKPDKKAKPAR
                     QGKLEEAAKPDEQGQDEGKPEKQGKSDGEGKHQGESKPDSQAKSASEARAAEKRPAED
                     YVPRKAKRKTDRGTDDSPKNSQEDLQDRHVSSEEAMRECADMTRAQEELRKRQKMGGF
                     HWVPRDAQEALVPRGQRGVRGMRGGGGRSQRGLHDIPYL"
ORIGIN      
        1 ggatacctgt gcccaacacc cacatttgcg cagcaccatt tccttgagct gtcctggtta
       61 ctgtgagccc agagaaggtg cacaggtctg tcctgggtct cctcaggtcc ctgttgttcc
      121 cagcgcacct tgacacctga aaaggagggt cgaccagctc aggatccctg cgggacagga
      181 aaaggaggga aaccttgaca tggaagaact ccacggtgaa aacgaaggca agctggaaaa
      241 ggagggaaag ccagaagatg aagtagagcc tgaagatgaa gaaaagtcag atgaggaaga
      301 gaagccggac aagaaagcaa agccagcacg ccagggcaag ctagaggagg cggcaaagcc
      361 agatgagcag gggcaagatg aggggaagcc agagaagcag ggaaagtctg acggggaggg
      421 caagcaccaa ggggagagca agcccgattc ccaggcaaag tcagccagcg aggcgcgagc
      481 tgcagaaaag cgccccgctg aagattatgt gccccggaaa gcaaagcgaa aaacagatag
      541 ggggacagat gattctccca agaactccca ggaggactta caggacaggc atgtgagcag
      601 tgaggaggcg atgagagagt gtgcagatat gacaagggct caggaagagc tgaggaagag
      661 gcagaaaatg ggtggttttc actgggtacc aagagatgca caggaggctt tagtccccag
      721 gggccaacgg ggagtcaggg ggatgagggg cggcggaggc aggagccaga ggggcctcca
      781 tgacatccca tacctttaat gcctttggcc ttcaattctg acctctctga ggagaaagaa
      841 cactgctggc cctgctttcc ctggtaacta cttgccgggc ctgtgcttta tttaaccttc
      901 agccgaaact ctgctttagg tatcactgtc cttaccagca gccttctgac ccaactacag
      961 tgctctctgt cttttagtac aggattttca cccatgtgca tgaaaaatat gttcatggta
     1021 cattgtaaag tgaataaaca aaacagtttg cagaaccaca aa
//
