LOCUS       NM_001401190            1093 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus transcription elongation factor A like 3
            (Tceal3), mRNA.
ACCESSION   NM_001401190 XM_577026
VERSION     NM_001401190.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Feb 3, 2022 this sequence version replaced XM_577026.8.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ213674.1, FQ213749.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-160               JAXUCZ010000021.1  104802966-104803125
            161-227             JAXUCZ010000021.1  104803683-104803749
            228-1093            JAXUCZ010000021.1  104804061-104804926
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq32"
     gene            1..1093
                     /gene="Tceal3"
                     /gene_synonym="RGD1562504"
                     /note="transcription elongation factor A like 3"
                     /db_xref="GeneID:501628"
                     /db_xref="RGD:1562504"
     exon            1..160
                     /gene="Tceal3"
                     /gene_synonym="RGD1562504"
                     /inference="alignment:Splign:2.1.0"
     exon            161..227
                     /gene="Tceal3"
                     /gene_synonym="RGD1562504"
                     /inference="alignment:Splign:2.1.0"
     exon            228..1093
                     /gene="Tceal3"
                     /gene_synonym="RGD1562504"
                     /inference="alignment:Splign:2.1.0"
     CDS             254..853
                     /gene="Tceal3"
                     /gene_synonym="RGD1562504"
                     /note="transcription elongation factor A (SII)-like 3"
                     /codon_start=1
                     /product="transcription elongation factor A protein-like
                     3"
                     /protein_id="NP_001388119.1"
                     /db_xref="GeneID:501628"
                     /db_xref="RGD:1562504"
                     /translation="MEELHGENEGKLEKEGKPEDEVEPEDEEKSDEEEKPDKKAKPAR
                     QGKLEEAAKPDEQGQDEGKPEKQGKSDGEGKHQGESKPDSQAKSASEARAAEKRPAED
                     YVPRKAKRKTDRGTDDSPKNSQEDLQDRHVSSEEAMRECADMTRAQEELRKRQKMGGF
                     HWVPRDAQEALVPRGQRGVRGMRGGGGRSQRGLHDIPYL"
ORIGIN      
        1 gcagacgtgg gcaccagccc ccacgtccgc ttgcccgccc tgcggtctgg tcttggcacc
       61 caagcagaac cagctccctg aactgctcta agcagcagac cagctgcgag tgggcttcta
      121 caagccggag aaggcaaagg cctgtcctgg gtatccttag gtccctgttg ttcccagcgc
      181 accttgacac ctgaaaagga gggtcgacca gctcaggatc cctgcgggac aggaaaagga
      241 gggaaacctt gacatggaag aactccacgg tgaaaacgaa ggcaagctgg aaaaggaggg
      301 aaagccagaa gatgaagtag agcctgaaga tgaagaaaag tcagatgagg aagagaagcc
      361 ggacaagaaa gcaaagccag cgcgccaggg caagctagag gaggcggcaa agccagatga
      421 gcaggggcaa gatgagggga agcctgagaa gcagggaaag tctgacgggg agggcaagca
      481 ccaaggggag agcaagcccg attcccaggc aaagtcagcc agcgaggcgc gagctgcaga
      541 aaagcgcccc gctgaagatt atgtgccccg gaaagcaaag cgaaaaacag atagggggac
      601 agatgattct cccaagaact cccaggagga cttacaggac aggcatgtga gcagtgagga
      661 ggcgatgaga gagtgtgcag atatgacaag ggctcaggaa gagctgagga agaggcagaa
      721 aatgggtggt tttcactggg taccaagaga tgcacaggag gctttagtcc ccaggggcca
      781 acggggagtc agggggatga ggggcggcgg aggcaggagc cagaggggcc tccatgacat
      841 cccatacctt taatgccttt ggccttcaat tctgacctct ctgaggagaa agaacactgc
      901 tggccctgct ttccctggta actacttgcc gggcctgtgc tttatttaac cttcagccga
      961 aactctgctt taggtatcac tgtccttacc agcagccttc tgacccaact acagtgctct
     1021 ctcttttagt acaggatttt cacccatgtg catgtacatt gtaaaataac aataaaaagt
     1081 ttgcagaact aca
//
