LOCUS       NM_001395075            3975 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus T-box transcription factor 15 (Tbx15), mRNA.
ACCESSION   NM_001395075 XM_006233027
VERSION     NM_001395075.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3975)
  AUTHORS   Farin,H.F., Bussen,M., Schmidt,M.K., Singh,M.K.,
            Schuster-Gossler,K. and Kispert,A.
  TITLE     Transcriptional repression by the T-box proteins Tbx18 and Tbx15
            depends on Groucho corepressors
  JOURNAL   J Biol Chem 282 (35), 25748-25759 (2007)
   PUBMED   17584735
REFERENCE   2  (bases 1 to 3975)
  AUTHORS   Kuijper,S., Beverdam,A., Kroon,C., Brouwer,A., Candille,S.,
            Barsh,G. and Meijlink,F.
  TITLE     Genetics of shoulder girdle formation: roles of Tbx15 and
            aristaless-like genes
  JOURNAL   Development 132 (7), 1601-1610 (2005)
   PUBMED   15728667
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jun 3, 2021 this sequence version replaced XM_006233027.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643296.7044.1,
                                           SRR26643295.10480.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-761               JAXUCZ010000002.1  189265373-189266133
            762-975             JAXUCZ010000002.1  189323487-189323700
            976-1077            JAXUCZ010000002.1  189327415-189327516
            1078-1249           JAXUCZ010000002.1  189329299-189329470
            1250-1417           JAXUCZ010000002.1  189330465-189330632
            1418-1482           JAXUCZ010000002.1  189340681-189340745
            1483-1580           JAXUCZ010000002.1  189354636-189354733
            1581-3975           JAXUCZ010000002.1  189374072-189376466
FEATURES             Location/Qualifiers
     source          1..3975
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..3975
                     /gene="Tbx15"
                     /note="T-box transcription factor 15"
                     /db_xref="GeneID:295315"
                     /db_xref="RGD:1308094"
     exon            1..761
                     /gene="Tbx15"
                     /inference="alignment:Splign:2.1.0"
     CDS             557..2365
                     /gene="Tbx15"
                     /note="T-box 15"
                     /codon_start=1
                     /product="T-box transcription factor TBX15"
                     /protein_id="NP_001382004.1"
                     /db_xref="GeneID:295315"
                     /db_xref="RGD:1308094"
                     /translation="MSERRRSAVALSSRAHAFSVEALIGSNKKRKLRDWEEKGLDLSM
                     EALSPTGPLGDTDDPATHGLEPHPDSEQSTGSDSEVLTERTSCSFSAHTDLASGAAGS
                     VPVAMSSMEEIQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLDPHQQYY
                     IAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVVSFDK
                     LKLTNNELDDQGHIILHSMHKYQPRVHVIRKDFSSDLSPTKPVPVGDGVKTFNFPETV
                     FTTVTAYQNQQITRLKIDRNPFAKGFRDSGRNRTGLEAIMETYAFWRPPVRTLTFEDF
                     TTMQKQQGGSTGTSPSTSSTGTPSPSASSHLLSPSCSPPTFHLAPNTFNVGCRESQLC
                     NLNLSDYPPCARSNMAALQSYPGLSDSGYNRLQSGTASATQPSETFMPQRTPSLISGI
                     PTPPSLPSNSKMEAYGGQLGSFPTSQFQYVMQAGNAASSSSSPHMFGGSHMQQSSYNA
                     FSLHNPYNLYGYNFPTSPRLAASPEKLSASQSTLLCSSPSNGAFGERQYLPTGMEHSV
                     HMISPSTNNQQATNTCDGRQYGAVPGSSSQMSVHMV"
     exon            762..975
                     /gene="Tbx15"
                     /inference="alignment:Splign:2.1.0"
     exon            976..1077
                     /gene="Tbx15"
                     /inference="alignment:Splign:2.1.0"
     exon            1078..1249
                     /gene="Tbx15"
                     /inference="alignment:Splign:2.1.0"
     exon            1250..1417
                     /gene="Tbx15"
                     /inference="alignment:Splign:2.1.0"
     exon            1418..1482
                     /gene="Tbx15"
                     /inference="alignment:Splign:2.1.0"
     exon            1483..1580
                     /gene="Tbx15"
                     /inference="alignment:Splign:2.1.0"
     exon            1581..3975
                     /gene="Tbx15"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttctccctc acccctcgga caggagctca ctgcctaccc cctgttcctc gggaagggag
       61 gaattcaggg gggaaaagtt tcccagaagt ttggatcagg gacgaacggg aagaccgaga
      121 ggaaaagggg gagagggagg agaaaaggga agagggagga gagagagaga gagggagtga
      181 attttaaaaa aaaagaaaag aaagaaagaa aagaaaagaa aaaaaaaggg aaagatgaag
      241 ttcagtccgc agagtttgtg agcgcctgcc cgggtgggtg gggagctgga ctcagcgctc
      301 atgcagcggg cgggcagcgt tccccgcgct cgttcctaga ggctggggca gctgggggca
      361 ccggtctgat ccggcggtcg agggcggggg aggacacgga gggagggagc agatcacccg
      421 cggagccgcc gccccagctt cggccgcggc gccgccgcct ctccagggcc gggtcggcgg
      481 gcgctccgag cgtgcggccc cggggctgcc agctcagtag cgcgggcgag aggagagccg
      541 ggcgcgggcg gctaaaatga gtgaaaggag aagatctgca gtcgccctga gctcccgagc
      601 acatgccttc tccgttgaag ccttgatcgg ctcaaataaa aagcggaaac tgcgagactg
      661 ggaggagaag gggttggacc tgtccatgga ggcgctgagt cccacaggcc cactcggaga
      721 cacagacgac ccggcgacac acggcctgga gccccacccg gattccgagc agagcactgg
      781 gtcggactcg gaagtgctca ctgagcggac ctcctgctcg ttcagtgctc acactgacct
      841 ggcgtctggt gctgcaggct ccgtgcctgt ggccatgtca tccatggaag agattcaggt
      901 ggagttacaa tgtgctgacc tctggaagag gttccacgac attggaacag agatgatcat
      961 caccaaagca ggcaggagga tgtttcccgc catgagagtg aaaatcactg gcctggatcc
     1021 acatcagcaa tactatatag caatggatat tgtgcctgta gacaataaaa gatacagata
     1081 tgtgtatcat agctccaagt ggatggtggc tggcaatgct gactcccctg tgcctccgag
     1141 agtttacata cacccggatt ccctagcatc tggagacacc tggatgagac aggtggtcag
     1201 tttcgacaag ctcaagctga ccaacaatga actggatgat caaggacaca tcattctgca
     1261 ctccatgcat aaataccagc ctcgagtcca cgtgatccgc aaggacttca gcagtgatct
     1321 ttcgcccacc aaacctgtgc ctgtggggga tggagtaaaa acattcaact ttcctgagac
     1381 cgtgtttacc acagtcacag cctatcagaa ccagcagatc accagattaa aaattgaccg
     1441 aaaccctttc gctaaaggat tcagagattc tggcagaaac agaactggac ttgaagccat
     1501 catggagact tatgcattct ggagacctcc tgtgcgcaca ctgacctttg aggacttcac
     1561 taccatgcaa aagcagcaag ggggcagtac aggtacatct ccaagcacct ccagcactgg
     1621 gacaccatct ccttcggctt cttctcatct cctgtctcca tcttgttctc ctccaacttt
     1681 tcatttggcc ccgaatactt tcaatgtggg ctgtcgagaa agccagctgt gtaacctaaa
     1741 cctctctgat tatccaccat gtgcccgaag taacatggct gctttacaga gctatccagg
     1801 gctgagtgac agtggctaca acaggctcca gagtggcaca gcttcagcca ctcagccctc
     1861 tgaaaccttc atgcctcaga ggactccatc tctgatctca ggaataccaa cacctccctc
     1921 gttgcccagc aacagcaaga tggaagccta tggtggccag ttggggtcct tccccacttc
     1981 ccagtttcag tatgtcatgc aggcaggcaa cgcagcctct agttcctcat cgccacacat
     2041 gtttggtggc agccatatgc agcagagctc ctataatgcc ttctccctcc ataaccccta
     2101 caatctgtat ggatacaatt tccccacttc cccaaggcta gctgcaagcc cagagaaact
     2161 gagcgcatct caaagcactt tactctgttc ttctccttcc aacggggcct ttggagagag
     2221 gcagtacctg cccacaggga tggagcacag tgtgcacatg atcagccctt caactaataa
     2281 tcagcaggcc accaacacct gtgatggtcg ccagtatggg gcagtcccag gctcctcctc
     2341 tcagatgtcc gtacacatgg tttaaagagc tgtccagaca ccatggaggt gatggcggtc
     2401 aagactccag aatctctgtc ggtggatctt cctcttcggg aggcccgtgc cttgggaaaa
     2461 tagaaattgt gcatttgttt ttgtttttgt tttgtttgga taaggaaaac agaccaacaa
     2521 tagataccgc tgaaggatcc ttggagtcca tcatccgtat ctcagtggtc aatcctctgc
     2581 cttccaaaat cttagtttta taaaagcatt gtgtatgaca gagtggcctt gaagagactg
     2641 aataatcatt ttataataat attgaaggaa atgctagcat gtagcagcca agaaagttac
     2701 acacacacac acacacattt acatgaatat attcatgtac acacttgcat acacaaagta
     2761 atacaaacac aaacatacac actgactctg aactgggtga actctgtgaa gggaggccca
     2821 gaatgggtgc tttcaccaaa aatttgccca tgtacaatcc tagacggatt gggccaccat
     2881 taaccattag cctttctccc tcgcagctta ccatgttcct ggaatgaacc gtgtacctag
     2941 aacttctcct cgtcacagag gtggaaaggc atcagtgctg cacctggact tggcttcctg
     3001 agaaagattg ctttttatcc tcttcattca gcgtgctgtc tttgatgtta tagtggtgcc
     3061 tgtggaaaga cagggtgaga aaagctggga gagagaaaga gaatcgaggg caggagagag
     3121 tggacagcaa gacaaagaag atgtaaacaa atgagattta atccaccaag gagagttggt
     3181 tgggtttgtt tagcctctaa agttatagaa agaatgctgg tggtggtgga gagtaagcct
     3241 cttggggacc ctgctcagag tgaagggtac ggatgagaag ggctaggata aggaatgctt
     3301 cctcattcca gagctctgac tataatgacg caggagggag gtgtcccttg tgggagtgcc
     3361 attccacggc atgcagctga gcagggtgag ggaaacaggt gtcaagaatg aagaatgatt
     3421 ttatctccca gatgttacca cagaaacagt catggaagac agacctggcc tcacatgcca
     3481 gatccaaagt gctgacctgg acaatctgtc cctgttcccc atgcaagaaa aatcctgaca
     3541 cactggagag aattgcagat gggtcttctg ccccttttct atctgcctgt tgctctccat
     3601 tttgattaaa tagttcattg cattctgaag tttggggatt gttttttctt tacttttctt
     3661 ttcaaatcct ttaatgataa gaaaacaagt gaagcttggt gcaagctaaa atttttaaat
     3721 ggtgtggaaa ctcgaatgat accaagtaag ataatacaga tattattaag aatttttttt
     3781 gttttgaggt gatgtagata aatgtattta tatgcctagt agggtattca atattatgaa
     3841 tattaaaaaa gggggcaata aaagggtatg taaaatatgt atgaagaaaa ggtgtataaa
     3901 aatttgccct tatgcacgga actgtttctg agtgccaagc acagaaagcc gctaaataaa
     3961 atctttgcaa ttgtt
//
