LOCUS       NM_172021               3340 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus TBK1 binding protein 1 (Tbkbp1), mRNA.
ACCESSION   NM_172021
VERSION     NM_172021.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3340)
  AUTHORS   Liebau,S., Proepper,C., Schmidt,T., Schoen,M., Bockmann,J. and
            Boeckers,T.M.
  TITLE     ProSAPiP2, a novel postsynaptic density protein that interacts with
            ProSAP2/Shank3
  JOURNAL   Biochem Biophys Res Commun 385 (3), 460-465 (2009)
   PUBMED   19481056
  REMARK    GeneRIF: a novel interaction partner of ProSAP2/Shank3, named
            ProSAP interacting protein 2 (ProSAPiP2) that does not show any
            close homology to other known proteins, was characterized
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC076503.1.
            
            On Jul 18, 2004 this sequence version replaced NM_172021.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC076503.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3340
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..3340
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /note="TBK1 binding protein 1"
                     /db_xref="GeneID:266764"
                     /db_xref="RGD:631328"
     exon            1..92
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /inference="alignment:Splign:2.1.0"
     exon            93..346
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /inference="alignment:Splign:2.1.0"
     CDS             122..1963
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /codon_start=1
                     /product="TANK-binding kinase 1-binding protein 1"
                     /protein_id="NP_742018.2"
                     /db_xref="GeneID:266764"
                     /db_xref="RGD:631328"
                     /translation="MESMFEDDISILTQEALGPSEVWLDGPGDPSLGGDMCSASHFAL
                     ITAYGDIKERLGGLERENATLRRRLKVYEIKYPLITDFGEEHGFPLYEIKDGSLLEVE
                     KVSLQQRLNQFQHELQKNKEQEEQLGEMIQAYEKLCVEKSDLETELGEMRALVETHLR
                     QICGLEKQLQQQQGLRDAAFSSLSPPAVPATACPDLDLHYLALRGGPALGHAGWPGPT
                     SVSVSELERRRLEEALEAAQGEARGAQLREEQLQAECERLQGELKQLQETRAQDLASN
                     QSECGMAWVKRVGDDQVNLALAYTELTEELGRLRELSSLQGRILRTLLQEQARNAGQR
                     HSPLSQRHSPAPACPSPSPPARPPPCAPCQSPAAQRRSPVPPCPSPQQRRSPASPSCP
                     SPVPQRRSPVPPSCQSPSPQRRSPVPPSCPAPQPRPPPPPGERTLAERAYAKPPSHHA
                     KAGFQGRRSYSELAEGAAYAAASPAWLQAEAATLPKPRAYGGELYGPGRPLSPRRAFE
                     GIRLRFEKQPSEEEEWAMPASPPSPEASTIRCASFCAGFPIPESPAATAYAHAEHAQS
                     WPSINLLMETVGSDIRSCPLCQLGFPVGYPDDALIKHIDSHLENSKI"
     exon            347..469
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /inference="alignment:Splign:2.1.0"
     exon            470..574
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /inference="alignment:Splign:2.1.0"
     exon            575..755
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /inference="alignment:Splign:2.1.0"
     exon            756..934
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /inference="alignment:Splign:2.1.0"
     exon            935..996
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /inference="alignment:Splign:2.1.0"
     exon            997..1115
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /inference="alignment:Splign:2.1.0"
     exon            1116..1834
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /inference="alignment:Splign:2.1.0"
     exon            1835..3307
                     /gene="Tbkbp1"
                     /gene_synonym="Prosapip2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggctgactgg cgggactggc cgtccagaag cgctggcctt ccttagatac aggcgacaga
       61 ggcctgggat gggaatcttg gcggctgtcg aggaggccca gtgtgggctg aagcccttac
      121 catggagtcc atgtttgaag atgacatcag catcctgacc caagaggcct tggggcccag
      181 tgaggtgtgg ctggatggtc ctggagaccc gtcactggga ggggacatgt gctctgcctc
      241 ccattttgct ctcatcacag cctatggaga tatcaaagag cggctaggag gcctggagag
      301 agagaatgcc accctccgcc gtcgcctcaa agtctatgag attaagtatc cgctgatcac
      361 cgattttgga gaagagcatg gcttccctct gtatgaaatc aaggatggct ccctgctgga
      421 ggtggagaag gtcagtctgc agcaacggct caatcagttc caacacgagt tgcagaagaa
      481 taaggagcag gaagaacagc tcggggagat gatccaggct tacgagaaac tgtgtgtgga
      541 gaaaagcgac ctggagacag agctggggga gatgcgagct ctggtagaga cacacctacg
      601 gcagatctgt ggtttggaga aacagctgca gcaacagcaa ggcctccggg atgcagcttt
      661 ctccagcctg agccccccag cggtccctgc cacagcctgt cctgacctgg acctgcacta
      721 tctggctctg agagggggac ctgccttggg tcatgcaggc tggcctggcc ctaccagtgt
      781 aagtgtgagt gagttggagc ggagacgcct ggaagaggcc ctggaggctg cgcaggggga
      841 ggctcgggga gctcagctcc gggaggagca actccaggca gaatgtgagc ggcttcaggg
      901 agagctgaag cagctgcagg agacccgggc ccaggatctg gcctccaacc agtcggaatg
      961 tggcatggct tgggtaaaga gagttgggga cgatcaggtg aacttggcac tggcctatac
     1021 agaactgacc gaggagctgg gtcgccttcg ggagttgagt tccctgcagg ggaggatctt
     1081 gaggactttg ctacaggaac aggcccgcaa tgcaggccaa aggcactcac cgctgtcaca
     1141 acgtcactcc ccggcccccg cgtgcccctc accctcccca cctgcccgac cgccgccctg
     1201 tgccccatgc cagtcccccg ctgcacagcg ccgttcgccc gtgcccccgt gcccttcacc
     1261 ccagcagcgc cgctcgcccg cctcgccgtc ctgcccgtcg ccggtcccac agcgccgctc
     1321 gccggtgccg ccgtcgtgcc agtcgcccag tccgcagcgc cgctcgcctg tgccacccag
     1381 ctgcccggcc ccgcagcccc ggccaccgcc accaccgggg gagaggacgc tggccgagcg
     1441 tgcctatgct aagccgccca gccaccacgc caaggccggc ttccagggcc gccgcagcta
     1501 ctcggagcta gcggaggggg cggcctacgc tgctgcctcc cccgcctggc tgcaggccga
     1561 ggctgccacg ctccctaagc cccgcgccta tggcggagag ctctacggcc cgggcaggcc
     1621 gctcagcccg cgccgagcct tcgagggcat ccgcttgcgc tttgagaaac agccatcgga
     1681 ggaagaggag tgggccatgc ccgccagccc gcccagtccc gaggcgagca ccatccgctg
     1741 cgcctcattc tgtgcgggct tccccatccc agagtcacct gcggccaccg cctatgccca
     1801 cgctgagcac gcacagtcct ggccatccat caatctactg atggagacgg tgggctccga
     1861 catccgaagt tgccccctct gccagttggg tttccctgtc gggtacccag atgatgccct
     1921 catcaaacac attgactccc acctggagaa cagcaagatc tagggcacct ctcccacaac
     1981 tgtttctctg ttctctctca tcaccccgaa ctctcacttt gaatgctgca tgaacctcgt
     2041 gggccccgcc ccttgcggcc cccagatacc tccactggct accgagtcga tgtgtgtgcc
     2101 gccttccctg gtccaggcgc cacccagctc cggctctttc ctggaggtcg accaaggctc
     2161 ccacatcttc ctggttcctc ctggggagtg gggatctggt ctgggatgag gaggacatac
     2221 cctccacctc tctctgcctt tctgtccttc aacagggttg tctccaagag gaagtctagt
     2281 actcatggga gggagaggaa gaggtgtcaa gagctctggg agccccttcc caatgtctgt
     2341 ctttcctggg ctgggttctt ccaggaagaa cctcttggta gggtctcaga gcccgccctg
     2401 cacaccgacg ccagccctct gtctcatgac cgaccagctt ggggctcgtg gtactgggga
     2461 aagaggcatc ttgtttcttg ttgtcactgc aggccagctc tgttctcccc ctctgtacac
     2521 cctgggaaac tggaatggtg gcagaggggt gggaggaccc tgcaggcctt ggatgatcca
     2581 gcccaaaggg gctgccttga ggctaggact cctgggccat taccctcagt ccaggggact
     2641 gcaccagcct cacaggcctg ggcccttcag gagcccctgg cactaaggtg cagatcacca
     2701 aggcagatgc ctccaccctg ccccctactg cagctcctga caccacaggt tccccagagc
     2761 ccaagtgtga ctcagcctgc gtttgctggg tgggtgttat cagcccctcc ctcccaggcc
     2821 agaacctgag attgggacct gggtgctgtg gagatcaatt tcaaaagagc taaccccctt
     2881 cccaaaccca ccccccattc cctctgtgaa atctacctca gagtcgtccc cttagaaaga
     2941 caggggagtg ggaggctggg gccccaggct gaggtgggag cctcctgagg gagtctgctg
     3001 cccactatga atccacccct cactttgagc ctccctgggg ccttggccgg ccgatgccag
     3061 tgaaaaccac tgtcatccca tgtgccattc tgatccaaat cttccaggcc ctctccccac
     3121 acccctcctt cctctgtgca gggggtgagg ggtacgtcag cagggaaggg gccaaggact
     3181 ccagagactt gtcattgtac cctgagtgtt ccccagagag gggacatggg gaagggggcc
     3241 tgtagagggg agagagagcc aagtgctctc tgaacaagtt gaaagtccaa ataaaacgta
     3301 cctgttcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
