LOCUS       XM_008771736            2215 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus tubulin folding cofactor E (Tbce),
            transcript variant X1, mRNA.
ACCESSION   XM_008771736
VERSION     XM_008771736.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008771736.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2215
                     /gene="Tbce"
                     /note="tubulin folding cofactor E; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 62 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:361255"
                     /db_xref="RGD:1305533"
     CDS             244..1938
                     /gene="Tbce"
                     /codon_start=1
                     /product="tubulin-specific chaperone E isoform X1"
                     /protein_id="XP_008769958.2"
                     /db_xref="GeneID:361255"
                     /db_xref="RGD:1305533"
                     /translation="MCAQTHTLNNKNLLKQKERSPILNSCYLRMSDILPLDVIGRRVE
                     VNGEYATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGTMYFKCRHPTGGSFVRPN
                     IVNFGEDFLTALKKRYVLTDGPDDDEKSCSLKVGSKQVQTIGFEHITKKQSQLRSLQD
                     ISLWKCAVSCAGERGRIAEACPNIRVVDLSKNLLSTWDEVILIAEQLKDLEALDLSEN
                     KLQFPSDSPTLTRTFSTLKTLVLNKTGITWTEVLHCAPSWPVLQELYLKSNGISISER
                     PVNALQNLRLLDLSSNPSIDESQLCLIAYLPRLEHLLLSDIGLSSIHFPDAEIGCKTS
                     MFPALTYLIVNDNQISEWSFINELDKLQSLQALSCARNPLTKGDKAEEIIIAKIGQLK
                     TLNRCQILPEERRGAELDYRKAFGKEWRKAGGHPDPDRNRPSAEFLSAHPRYQLLCCK
                     YGAPEDEELKTQQPFMLKNQLLTLKIKCSNQPEQQILEKQLPDSMTIQKVKGLLSRLL
                     KVPVSELLLSYESSKVRCKQRHKAKLRSPQYCEPFITRSKWRQPLPSQLTCHWRVT"
ORIGIN      
        1 tctcatctga gaagcaaaca acggagctta aggatgtggt tcagtagatg cagagttcgc
       61 ctagcatgta caaaaccctg gaatccatct ctggtaccac ataagtctgc acaggtctga
      121 tttcagcact ggcaaggtga tagcaggaag atcagaagtt caaagtcatc atcagctaca
      181 aaatgagttc aaggccagcc tgagctgtcc tactgaccct atctcaaata cacacataca
      241 cgcatgtgtg cacaaacaca cacactcaac aataaaaacc tgctaaaaca aaaggaaagg
      301 tctcctattt tgaattcctg ctatcttaga atgagtgaca tcttgccatt agatgtcatt
      361 ggtagaagag ttgaagttaa cggagaatac gcaacagtgc gcttttgtgg tgctgttcct
      421 cctgtggcag gactctggtt aggagttgag tgggacaatc ctgagagagg aaagcatgat
      481 gggagccacg aaggtactat gtattttaaa tgcaggcacc caacaggagg ctctttcgtt
      541 cgtccaaaca tagttaattt tggagaagac tttcttactg cccttaagaa gcgctatgtg
      601 ctcacagatg gacctgatga tgatgaaaaa tcgtgttcct taaaagtcgg aagtaaacaa
      661 gtgcaaacta ttggatttga gcatattaca aagaagcaga gtcagctgag atcactgcag
      721 gacatttccc tgtggaagtg tgccgtgagt tgtgctggtg aacgaggaag aattgctgaa
      781 gcctgcccca atattcgagt tgtagattta tccaaaaact tgttgtcaac ttgggatgaa
      841 gtgattctta ttgcagagca gctcaaagac ctggaggctc tggatctcag tgaaaataaa
      901 ctgcagtttc cctctgactc accaactcta actagaacat tttctactct gaagacttta
      961 gtcctgaaca aaacaggaat aacgtggact gaggtgctgc actgtgcccc ttcatggcca
     1021 gtcctccagg aactttacct caagtctaac ggtatttcca tttcagaaag gccagtgaat
     1081 gccctgcaga acctgaggtt actagacctt tcttccaacc catcaattga tgaaagccag
     1141 ctgtgcctga tagcatatct cccaagatta gaacacctac tcctttctga cattggactt
     1201 tcttctatac attttccaga tgctgaaatt gggtgcaaaa catccatgtt cccggccttg
     1261 acgtacctca tagtcaatga caaccagata tcagaatggt catttatcaa tgagctggat
     1321 aaattacaga gcctgcaggc cctgtcctgt gctagaaacc ctttgaccaa aggagacaaa
     1381 gcagaggaga tcatcattgc caagattggt cagctgaaga ccctgaacag gtgtcagatt
     1441 cttccagagg aaaggcgtgg tgctgagctt gattatcgaa aagcctttgg aaaagaatgg
     1501 agaaaggctg gtggacaccc agatccagac agaaacaggc caagtgcaga gtttctctcg
     1561 gcccatccaa gataccagct tctctgctgc aaatatggtg cacctgaaga tgaggagctc
     1621 aaaacacagc agccattcat gctaaaaaat cagctactaa cactgaagat aaaatgctca
     1681 aatcaacctg aacaacaaat attagaaaag cagttgccag actccatgac aattcaaaag
     1741 gtaaagggac tgctgtcacg tcttctcaag gttcctgtgt cagaacttct gttgtcctac
     1801 gaaagttcca aggtacgttg taagcaaaga cacaaagcta agcttcgttc tccacagtac
     1861 tgtgagcctt tcataacacg ttctaaatgg aggcagcctt tgccttcaca actcacctgc
     1921 cattggaggg tgacgtgaat aataacatgc accctgtcct tctactcccc atttgattct
     1981 aattttagat gccgggcaga gaaatcgaac tagaaaatga cctgcagcca ttacagtttt
     2041 attctgtgga gaatggagac tgcctactgg tgcgctggta gcaggccaac cgtgagagtt
     2101 aaggctggaa tgtgtacacc agaaacagaa cctctgccct cacaaatgat gttgttttgt
     2161 tgggaaaaga ccattcggtt gtttattaat agaataataa aggctttgat tacta
//
