LOCUS       NM_001040180            1107 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus tubulin folding cofactor B (Tbcb), mRNA.
ACCESSION   NM_001040180 XM_214899
VERSION     NM_001040180.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Kuh GF, Stockmann M, Meyer-Ohlendorf M, Linta L, Proepper C,
            Ludolph AC, Bockmann J, Boeckers TM and Liebau S.
  TITLE     Tubulin-binding cofactor B is a direct interaction partner of the
            dynactin subunit p150(Glued)
  JOURNAL   Cell Tissue Res 350 (1), 13-26 (2012)
   PUBMED   22777741
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AM258961.1.
            
            On Apr 26, 2006 this sequence version replaced XM_214899.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AM258961.1, CF978353.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06621351, SAMN16676786
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="W"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..1107
                     /gene="Tbcb"
                     /gene_synonym="Ckap1; ZH14"
                     /note="tubulin folding cofactor B"
                     /db_xref="GeneID:292777"
                     /db_xref="RGD:1309965"
     exon            1..353
                     /gene="Tbcb"
                     /gene_synonym="Ckap1; ZH14"
                     /inference="alignment:Splign:2.1.0"
     CDS             240..974
                     /gene="Tbcb"
                     /gene_synonym="Ckap1; ZH14"
                     /note="liver cancer related protein;
                     cytoskeleton-associated protein 1; tubulin-folding
                     cofactor B-like"
                     /codon_start=1
                     /product="tubulin-folding cofactor B"
                     /protein_id="NP_001035270.1"
                     /db_xref="GeneID:292777"
                     /db_xref="RGD:1309965"
                     /translation="MEVSGTSAPTVTVFISSSLNSFRSEKRYSRSLTIAEFKCKLELV
                     VGSPASCMELELYGADDQFYSKLDQEDALLGSYPVDDGCRIHVIDHSGVRLGEYEDVS
                     KVEKYEISPEAYERRQNTVRSFMKRSKLGPYNEELRAQQEAEAAQRLSEEEAQASAIS
                     VGSRCEVRAPGQSLRRGTVMYVGLTDFKPGYWVGVRYDEPLGKNDGSVNGKRYFECQA
                     KYGAFVKPAAVTVGDFPEEDYGLDEM"
     exon            354..497
                     /gene="Tbcb"
                     /gene_synonym="Ckap1; ZH14"
                     /inference="alignment:Splign:2.1.0"
     exon            498..594
                     /gene="Tbcb"
                     /gene_synonym="Ckap1; ZH14"
                     /inference="alignment:Splign:2.1.0"
     exon            595..786
                     /gene="Tbcb"
                     /gene_synonym="Ckap1; ZH14"
                     /inference="alignment:Splign:2.1.0"
     exon            787..859
                     /gene="Tbcb"
                     /gene_synonym="Ckap1; ZH14"
                     /inference="alignment:Splign:2.1.0"
     exon            860..1084
                     /gene="Tbcb"
                     /gene_synonym="Ckap1; ZH14"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagctattgg aagaaccgag agccacggaa ggcctctcgg gattggttgg acgcaacgga
       61 ggatccgcct gtccgtggag aaagggcgac agcgattggc tggtcatgtt aggtggagag
      121 cttacattgg tcaactccgg gacgagggcg ggacttatat cccagaagca gcggcggcca
      181 ctgcggagcc ggtgtgagac ggctgaagcg gaccgcgggc cactacaggg cgcggcgaga
      241 tggaggtgtc ggggacatcg gcgcccaccg tgacggtttt catcagcagc tccctcaaca
      301 gcttccgttc ggagaagcga tacagtcgta gcctcaccat cgcagagttc aagtgtaaac
      361 tggaactggt ggtgggcagc cctgcttcct gcatggaact ggagctgtat ggagctgacg
      421 accagttcta cagcaagttg gatcaggagg atgcactgct gggctcctat cctgtggatg
      481 atggctgccg aatccatgtc attgaccaca gtggtgtccg gctcggagaa tatgaggacg
      541 tgtccaaagt ggagaaatac gagatctcac cagaagctta cgaacggaga cagaacacag
      601 ttcgatcctt catgaagcgc agcaagttag gcccgtacaa tgaagaactc cgggcccagc
      661 aagaggcaga ggctgcccag cgtctcagtg aggaggaggc ccaagccagt gccatctctg
      721 tggggagccg ttgtgaggtg cgggcacccg gccagtccct tcgcaggggc actgtcatgt
      781 atgtaggact cacagatttc aagccaggct actgggttgg tgtccgatat gatgagccat
      841 taggaaaaaa cgatggcagt gtgaatggga aacgctactt tgaatgccag gccaagtacg
      901 gtgcctttgt gaagccagcg gctgtcacgg tgggagattt cccagaggaa gattacggat
      961 tggacgagat gtgacactga tggacatgtg accctatccc ttccggcccc atccctgaca
     1021 cagcccctct gaatgccagt ggcacctttc ctctgagatt tgtgcattaa attaagcaga
     1081 tcgaaaaaaa aaaaaaaaaa aaaaaaa
//
