LOCUS       NM_001025059            3519 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus TBC1 domain family, member 22B (Tbc1d22b), mRNA.
ACCESSION   NM_001025059 XM_577895
VERSION     NM_001025059.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3519)
  AUTHORS   Greninger AL, Knudsen GM, Betegon M, Burlingame AL and DeRisi JL.
  TITLE     ACBD3 interaction with TBC1 domain 22 protein is differentially
            affected by enteroviral and kobuviral 3A protein binding
  JOURNAL   mBio 4 (2), e00098-e13 (2013)
   PUBMED   23572552
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3519)
  AUTHORS   Yoshimura S, Egerer J, Fuchs E, Haas AK and Barr FA.
  TITLE     Functional dissection of Rab GTPases involved in primary cilium
            formation
  JOURNAL   J Cell Biol 178 (3), 363-369 (2007)
   PUBMED   17646400
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY380821.1.
            
            On Jun 25, 2005 this sequence version replaced XM_577895.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY380821.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3519
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..3519
                     /gene="Tbc1d22b"
                     /note="TBC1 domain family, member 22B"
                     /db_xref="GeneID:502414"
                     /db_xref="RGD:1564987"
     exon            1..91
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..1553
                     /gene="Tbc1d22b"
                     /codon_start=1
                     /product="TBC1 domain family member 22B"
                     /protein_id="NP_001020230.1"
                     /db_xref="GeneID:502414"
                     /db_xref="RGD:1564987"
                     /translation="MAAENSKQFWKRSAKLPGSIQPVYGAQHPPLDPRLTKNFIKERS
                     KVNSVPLKNKKASSFHEFARNTSDAWDIGDDEEEDLSSPSLQTLNSKVALATAAQVLE
                     NHSKLRVKPERSQSTTSDVPANYKVIKSSSDAQLSRNSSDTCLRNTLHKQQSLPLRPI
                     IPLVARISDQNASGAPPMTVREKTRLEKFRQLLSSHNTDLDELRKWSWPGVPREVRPV
                     TWRLLSGYLPANTERRKLTLQRKREEYFGFIEQYYDSRNEEHHQDTYRQIHIDIPRTN
                     PLIPLFQQPLVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEYVEEDVENF
                     DVTNLSQDMLRSIEADSFWCMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVH
                     SHFRRYEVEYLQFAFRWMNNLLMRELPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLI
                     KWRKEILDEEDFQGLLMLLQNLPTIHWGNEEIGLLLAEAYRLKYMFADAPNHYRR"
     exon            92..148
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     exon            149..456
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     exon            457..636
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     exon            637..707
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     exon            708..836
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     exon            837..902
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     exon            903..1017
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     exon            1018..1124
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     exon            1125..1200
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     exon            1201..1328
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     exon            1329..1424
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
     exon            1425..3503
                     /gene="Tbc1d22b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacccactga ccaggccttc ccccgggcca gagcgatggc cgccgagaac agcaagcagt
       61 tctggaagag gagcgccaag ctgccgggga gcattcagcc cgtgtatgga gcccagcacc
      121 ctcctctgga ccctcggctc accaaaaact tcatcaaaga acggtcgaaa gtcaactcag
      181 ttcctctgaa gaacaagaag gcctccagtt tccacgagtt tgcccggaat accagtgacg
      241 cttgggacat tggcgatgat gaggaagagg acctttcctc accgtctctc caaaccctga
      301 actcgaaagt ggctttggcc actgcagccc aagtcctgga aaaccacagc aagctgaggg
      361 tgaaaccgga acggtcgcag tcgacaacat cggacgtccc tgccaactac aaggtcataa
      421 agtccagcag tgacgcccag ctgtcccgaa attccagtga cacgtgcctg aggaacacac
      481 tccacaaaca acagtctctc cctctccggc ccatcatccc cctcgtcgcc cggatctcag
      541 accagaatgc ttctggggcc cctccaatga cagtccggga gaaaacccgc ctcgaaaagt
      601 tccgccagct gctttcaagc cacaacactg acttagatga actgaggaag tggagctggc
      661 caggcgttcc cagggaagtt cgaccagtga cctggagact gctgtcgggc tatctcccgg
      721 caaacaccga gcggcgcaag ctgaccctgc agcggaagcg ggaggagtac tttggcttca
      781 ttgagcagta ttatgactct cggaatgaag agcaccacca ggacacctac agacagattc
      841 acattgacat tccaaggacg aaccctctca ttcccttgtt ccagcagccg ctcgtccagg
      901 agatctttga acgaattctc tttatttggg ccatccgaca ccctgccagt gggtatgtcc
      961 agggaattaa tgacctggtc actccgttct ttgtcgtctt cctctcggaa tacgtggaag
     1021 aggatgtgga gaacttcgac gtgaccaacc tgtctcagga catgctgcgg agcattgagg
     1081 ccgacagctt ctggtgcatg agcaagctcc tggatgggat ccaggataat tacacgtttg
     1141 cacaaccagg gatccagaag aaggtcaaag cgctggaaga gctcgtcagc cggatcgatg
     1201 agcaggtaca cagtcacttc aggaggtatg aggtggagta cctgcagttt gccttccggt
     1261 ggatgaacaa cctgctgatg cgggagcttc ccctgcgctg caccatccgc ctgtgggata
     1321 cctaccagtc tgagccagaa ggcttctcgc acttccatct ctacgtgtgc gccgccttct
     1381 tgatcaagtg gaggaaggag attttggatg aggaagactt tcagggcctc ctcatgctgc
     1441 tgcagaacct gcctacgatc cactggggca acgaggagat cgggctgctg ctggctgagg
     1501 cctacagact caagtacatg tttgcggacg cccccaacca ctaccgccga taggtgctgt
     1561 ctctcctggg gacccagact gcccccatct ctgatggcaa tttcatcact gtggccaccg
     1621 tgcaagccgt ggaccccggc caggaaccac tcctgctgta caaagctcgc ccccccaccg
     1681 cagccaccac caccaccacc acccaggtct taacttccca gcatccgtca ctttgtctcg
     1741 ggatgtctat ctgggaccac tgtcagtatt ctgtgccgtg tggatgggcc gggctctggg
     1801 agagggcaga gggaaaggga gagttctctt tccctggaag acactggaca aaagaagggg
     1861 aggccctggg tctgcccccc attgtccatc ctcacctgcc agctctgccc aggaaccagc
     1921 tggtgatgtt ttcttttact ttcttttttt aaacaaggaa aacacacatt ttctaatatg
     1981 cccaaggcat agggtgttag gctctgtgct gttgcttctg tgactcagat tgatctggtc
     2041 actggtcaga gacacttcgt tttcagaaca ctccctgctc tgcctttttc ccctcacttc
     2101 tcctcctcct cctgtcccag ctgagccagt gacccagtga gtgagccctt cctcctcagg
     2161 cagaggagag ccgcgttcat catcctgagg agaggcctgc actcaagggc tgggaagtac
     2221 gtttgtcctt tcctcattgg ttatctgttc ccgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     2281 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt ttgtgtatat gtgagtgtgg gtatgtatat
     2341 gtgtgcatgt gcgtgcgtgc acatgactgt ttgtgagtgt gctagtgtgt gtgtacaagc
     2401 ccatcagcat tttgtcacat gtctgaattt gtgtccagac taacccatca gaaccggttg
     2461 ggaaggaccc caaggaccaa gcgtctgatg gtccctctca agggaccaca gcaggggagg
     2521 gagaaagggg gttgttttgt tccgttttaa ccaccttttt gaaccatttt tccagggcga
     2581 agccctccaa gatattatgt ataaattgtg tcattatgta tatgggtaaa ggtgtacaaa
     2641 tctatgtcct ctttgcagca gatatgattt tatatttata gcgtgcgttg acaagtgaaa
     2701 gcaagctagg cctttagcac aggtggctta agggaggggt ggggccaggt agaggtggct
     2761 ggagggtgtg gccagcagat ggtcatcagt cagtgtctcc gccttctttc tcttccctta
     2821 ctccccaccc ctccgctggc ctctgaggaa gatctgctct gtcatccgtt gcagagctcc
     2881 gctttcctca cccctctccc caccccagga aggacgagtc agaggcctcc ctcaggtttt
     2941 gtggccccag ccttgatctt ctcaatgtaa gtcagcactg tgacagagct ggctgacaag
     3001 tcggtgccaa gagaaggggt ccctgtatgt ccccaaggcc gggagctctt cctggaaagt
     3061 ggcattaagt gtcccctact accaccatca caccccgcag ctcaggagat ggaggccccg
     3121 ggccagagtt tccatgtttg gtggtggagg agggggagga tggaagccag gagccatcgt
     3181 cccctggggt gccaggcagt gtttccaggg tgacaccccg aagttcactt cctgtgtcac
     3241 tccacctcag gccacacctc acccctgtga gttagctccc tcagccaggc tgtttctcag
     3301 gcgttcttcc catcccccac ctgccccctg tgcctcagta gcctcctctt tcacaggcga
     3361 ggactcgaga ccccccctcc agcagactga gtaaagacag acttgtgttc ccaagtggtg
     3421 gttttatttt tttagtttta tgtttgtatg ggaaattgtg gataaagtga atggactgta
     3481 aataaatggt gtttcctcct ccaaaaaaaa aaaaaaaaa
//
