LOCUS       NM_001014210            1249 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus TBC1 domain family, member 21 (Tbc1d21), mRNA.
ACCESSION   NM_001014210 XM_343401
VERSION     NM_001014210.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Lin YH, Lin YM, Kuo YC, Wang YY and Kuo PL.
  TITLE     Identification and characterization of a novel Rab
            GTPase-activating protein in spermatids
  JOURNAL   Int J Androl 34 (5 Pt 2), e358-e367 (2011)
   PUBMED   21128978
REFERENCE   2  (bases 1 to 1249)
  AUTHORS   Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta
            R, Wang NS and Knepper MA.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   3  (bases 1 to 1249)
  AUTHORS   Yoshimura S, Egerer J, Fuchs E, Haas AK and Barr FA.
  TITLE     Functional dissection of Rab GTPases involved in primary cilium
            formation
  JOURNAL   J Cell Biol 178 (3), 363-369 (2007)
   PUBMED   17646400
REFERENCE   4  (bases 1 to 1249)
  AUTHORS   Itoh T, Satoh M, Kanno E and Fukuda M.
  TITLE     Screening for target Rabs of TBC (Tre-2/Bub2/Cdc16)
            domain-containing proteins based on their Rab-binding activity
  JOURNAL   Genes Cells 11 (9), 1023-1037 (2006)
   PUBMED   16923123
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC078987.1.
            
            On Apr 20, 2005 this sequence version replaced XM_343401.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC078987.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..1249
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /note="TBC1 domain family, member 21"
                     /db_xref="GeneID:363072"
                     /db_xref="RGD:1310243"
     exon            1..145
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /inference="alignment:Splign:2.1.0"
     CDS             86..1096
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /codon_start=1
                     /product="TBC1 domain family member 21"
                     /protein_id="NP_001014232.1"
                     /db_xref="GeneID:363072"
                     /db_xref="RGD:1310243"
                     /translation="MTTLSPENSLSARRSATFILEKKNPPIDKAEWDSFFDENGHLAK
                     SRDFICVNILERGLHPLVRADAWKFLTGYYSWQSSRDERLMVDSNRRRNYNSLCQMYE
                     KIQPLLENLHGNFTETRNNIVYDIQKLYDKDPLGNVLVDKKKLEKTLLLSYVCNTKAE
                     YQRGFHEMVMLFQLMVEHDHETFWLFQFFLQKTEHSCVINIGVGKNLDMLNNLITLLD
                     PQFADHLKGKGSGAVQSLFPWFCLCFQRAFKSFDDVWRLWEVLLTGKPCRNFQVLVAY
                     SMLQMVREQALLESMSGDAILMACNKLIDLDADELISAACVVYSELIQKEVPQALKDF
                     FL"
     exon            146..253
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /inference="alignment:Splign:2.1.0"
     exon            254..357
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /inference="alignment:Splign:2.1.0"
     exon            358..452
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /inference="alignment:Splign:2.1.0"
     exon            453..563
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /inference="alignment:Splign:2.1.0"
     exon            564..664
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /inference="alignment:Splign:2.1.0"
     exon            665..761
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /inference="alignment:Splign:2.1.0"
     exon            762..862
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /inference="alignment:Splign:2.1.0"
     exon            863..979
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /inference="alignment:Splign:2.1.0"
     exon            980..1063
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /inference="alignment:Splign:2.1.0"
     exon            1064..1222
                     /gene="Tbc1d21"
                     /gene_synonym="RGD1310243"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcccccttt ccctggctcc ctaatcacta gggatccttg ggaagtgctg gacacaggct
       61 actcccaagg catcaagagg ggaacatgac caccctttct ccagaaaaca gcctctctgc
      121 caggcggtca gccaccttca ttctggagaa gaaaaacccc cccattgaca aggcagaatg
      181 ggacagcttc ttcgatgaga acggtcactt ggccaagtca cgagacttca tttgtgttaa
      241 catcctggaa aggggactac atcccctcgt gagggcagac gcctggaagt tccttacagg
      301 gtactactca tggcagagtt cccgggatga gcggctcatg gtggacagca acagaaggag
      361 gaactataac tccttgtgcc agatgtatga gaaaatccag cccctgctgg aaaatttaca
      421 tgggaacttc acggagactc ggaacaacat cgtgtacgat attcagaagc tgtatgataa
      481 agatcccctg ggcaatgtgc ttgtagacaa gaagaaactg gagaagaccc tgctgctgag
      541 ttatgtctgc aatacaaagg ctgagtacca gcgaggcttc cacgagatgg tgatgctttt
      601 ccagctgatg gtagagcacg accatgagac cttctggcta ttccagtttt tcctgcagaa
      661 aacagagcac agttgtgtca tcaacatcgg tgtaggcaag aacctggaca tgctcaacaa
      721 cctgatcact ttactggacc ctcagtttgc tgaccacctc aaaggaaagg gctcgggagc
      781 tgtgcagtcc ctcttcccat ggttctgcct ttgcttccag cgtgccttca aatccttcga
      841 tgatgtctgg aggctctggg aggtcctgct gacagggaag ccctgcagga acttccaggt
      901 gctggtggcc tacagcatgc tacagatggt gcgggagcag gcgctgctgg agtctatgag
      961 cggtgacgcc attctcatgg cctgcaacaa gcttatcgac cttgatgcgg atgagctgat
     1021 ctctgctgcc tgcgtggttt attctgagct catacaaaag gaggttcctc aggcattaaa
     1081 ggatttcttt ctctaaggac agcaacactc acaatggatg cataccctca atggactgga
     1141 tgaaggccaa ctcttcaact atggggtcag gatcgatgac tactggggtg agggcataga
     1201 caatacagtg ccatagaaac caaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
