LOCUS       NM_001106258            2181 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus TBC1 domain family, member 17 (Tbc1d17), mRNA.
ACCESSION   NM_001106258 XM_001077952 XM_214940
VERSION     NM_001106258.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Yoshimura S, Egerer J, Fuchs E, Haas AK and Barr FA.
  TITLE     Functional dissection of Rab GTPases involved in primary cilium
            formation
  JOURNAL   J Cell Biol 178 (3), 363-369 (2007)
   PUBMED   17646400
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Fuchs E, Haas AK, Spooner RA, Yoshimura S, Lord JM and Barr FA.
  TITLE     Specific Rab GTPase-activating proteins define the Shiga toxin and
            epidermal growth factor uptake pathways
  JOURNAL   J Cell Biol 177 (6), 1133-1143 (2007)
   PUBMED   17562788
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC160880.1.
            
            On Mar 16, 2008 this sequence version replaced NM_001106258.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC160880.1, SRR8487226.98003.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760494 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..2181
                     /gene="Tbc1d17"
                     /note="TBC1 domain family, member 17"
                     /db_xref="GeneID:292886"
                     /db_xref="RGD:1309686"
     exon            1..41
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     CDS             21..1961
                     /gene="Tbc1d17"
                     /codon_start=1
                     /product="TBC1 domain family member 17"
                     /protein_id="NP_001099728.1"
                     /db_xref="GeneID:292886"
                     /db_xref="RGD:1309686"
                     /translation="MEGSSYRVVFEKGGVYLHTSARKHQDPDSLIAGVLRVVEKDNDV
                     LLHWAPVEEAGDPTQIFFSKKDPSGGEPSTSEEEPTFDPGYEPDWAVISTVRPRPHLA
                     EPRRGAEPSSPRSSWAFSVSLGELKSIRRSKPGLSWAYLVLVTQAGGSLPALHFHRGG
                     TRALLRVLSRYLLLASSPQDSRLYLVFPQDPSALSDSFHHLQLFDQDSSNVVSRFLQD
                     PYSTTFSSFSRVTNFFRGALQPHPEGASSPDLPPLPDDEPEPGFEVISCVELGQRPTV
                     ERAPPVTEEEWNRHVGPEGRLQNVPELKSRIFSGGLSPGLRREAWKFLLGYLSWESSA
                     EEHKAHVRKKTDEYFRMKLQWKSVSAEQERRNSLLHGYRSLIERDVSRTDRTNKFYEG
                     PENPGLGLLNDILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDAFWCFCGFMELVH
                     GNFEESQETMKRQLGQLLLLLRVLDQPLCDFLDSQDSGSLCFCFRWLLIWFKREFPFP
                     DVLRLWEVLWTGLPGPNLHLLVACAILDMERDTLMLSGFGSNEILKHINELTMKLSVE
                     DVLTRAEALYRQLTACPELPHNVQEILGLAQPEEPSSPSPPVSPMPLSPTRAPMPPPP
                     PEEVAPQPDSSLEILPEDEDGA"
     exon            42..140
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            141..215
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            216..339
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            340..547
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            548..659
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            660..821
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            822..950
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            951..1054
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1055..1149
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1150..1266
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1267..1367
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1368..1467
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1468..1565
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1566..1682
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1683..1769
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1770..2157
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgaaacatc ctcggcggca atggaaggat ccagctacag ggtggtgttt gaaaagggag
       61 gcgtgtacct gcacaccagc gctcggaagc accaggatcc ggactcactt atcgcgggcg
      121 tcttacgagt ggtggagaag gacaacgatg tcctcctgca ctgggctccg gtggaggagg
      181 ctggcgaccc aacgcagatc ttcttctcta agaaggaccc aagtggaggt gagcccagca
      241 cctcagagga ggaacccacc tttgacccag gctatgaacc tgactgggct gtcattagca
      301 cagtgcggcc acggccccac ctggcagagc ccaggagagg tgcagagccc agttcccccc
      361 ggagctcctg ggccttctct gtgagcctag gggagctcaa gtccatccgc agatccaagc
      421 caggcctcag ctgggcctac ctggttctgg tgacccaggc tggaggctcc ctgcctgcct
      481 tgcacttcca cagagggggt acccgagccc tgctccgagt ccttagccgc tacctgctgt
      541 tggccagctc tccacaggac tcccgcctct acttggtctt cccccaggac ccctctgccc
      601 tctctgactc cttccaccat cttcaactct ttgaccagga cagctccaac gtggtgtctc
      661 gcttccttca ggatccctac tctaccacct tcagtagctt ctctcgagtg accaacttct
      721 tccggggagc cctgcagccg caccctgagg gcgcctcttc ccctgatcta cccccgctgc
      781 cagatgatga gccagagcct ggctttgagg tcatctcttg cgtggaactg ggccagcgtc
      841 ccacagtgga acgtgctcct ccagtcacag aggaagaatg gaaccgccac gtgggtcctg
      901 agggtcgcct gcaaaatgtc cctgagttga aaagtcggat cttctcaggg ggtctcagcc
      961 ctggccttcg gcgggaggct tggaagttcc ttctggggta ccttagctgg gagagttcag
     1021 ctgaggaaca caaagcccac gtgcggaaga aaacggatga gtacttccga atgaagctgc
     1081 agtggaagtc tgtgagcgct gagcaggagc ggaggaattc actgcttcat ggctaccgaa
     1141 gcctcattga gagagatgta agccgcactg acaggactaa caagttctat gaagggcctg
     1201 agaacccagg gctgggcctg ctcaacgaca tccttcttac ctactgcatg taccacttcg
     1261 acttgggcta tgttcagggc atgagtgacc tcctgtcccc gatcctcttc gttgttcaga
     1321 atgaagtaga tgccttctgg tgtttctgtg gcttcatgga acttgtgcat gggaactttg
     1381 aagagagtca ggagactatg aagcggcagc ttgggcagct cctgctgctt ctgcgggtgc
     1441 tggatcagcc actctgtgat ttcctggatt ctcaggactc gggctcgctg tgcttctgct
     1501 tccggtggct gctcatctgg ttcaagaggg aattcccctt tcctgacgtc cttcggctgt
     1561 gggaggtgct gtggactggg cttcctggcc ccaatctgca cctgctggtg gcctgtgcca
     1621 tcttggacat ggaacgggac accctgatgc tgtctggctt tggctccaac gagatcctta
     1681 agcacatcaa tgaactgacc atgaagctga gcgtggagga tgtgctgaca cgggcagagg
     1741 ctctgtacag gcagctgacg gcctgcccag agctgccaca caacgtgcag gagatcctgg
     1801 ggctggcaca gccagaagag cctagtagcc catctcctcc ggtatcccca atgcccttgt
     1861 cacccactcg agccccgatg cccccgccgc cgcctgagga agtggccccg cagcctgaca
     1921 gcagtctgga gattctgcct gaggatgaag atggtgcttg actgctagcc cagttcctca
     1981 gaccgggttc ctgaagattg acaggttctg agctccatgt ccgaagccta gagcggaggg
     2041 agaccctgag ccggccaatg aaatggagga aggtcctcct agaggtacgg gattcctcag
     2101 tgcccgccca ccagctgctg ccaatttgag gcaataaacc gttctcgttt gactgcaaaa
     2161 aaaaaaaaaa aaaaaaaaaa a
//
