LOCUS       NM_001399570            1232 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus Tax1 binding protein 3 (Tax1bp3), transcript
            variant 1, mRNA.
ACCESSION   NM_001399570 XM_006246761
VERSION     NM_001399570.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Oliver,A.W., He,X., Borthwick,K., Donne,A.J., Hampson,L. and
            Hampson,I.N.
  TITLE     The HPV16 E6 binding protein Tip-1 interacts with ARHGEF16, which
            activates Cdc42
  JOURNAL   Br J Cancer 104 (2), 324-331 (2011)
   PUBMED   21139582
REFERENCE   2  (bases 1 to 1232)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   3  (bases 1 to 1232)
  AUTHORS   Alewine,C., Olsen,O., Wade,J.B. and Welling,P.A.
  TITLE     TIP-1 has PDZ scaffold antagonist activity
  JOURNAL   Mol Biol Cell 17 (10), 4200-4211 (2006)
   PUBMED   16855024
REFERENCE   4  (bases 1 to 1232)
  AUTHORS   Kanamori,M., Sandy,P., Marzinotto,S., Benetti,R., Kai,C.,
            Hayashizaki,Y., Schneider,C. and Suzuki,H.
  TITLE     The PDZ protein tax-interacting protein-1 inhibits beta-catenin
            transcriptional activity and growth of colorectal cancer cells
  JOURNAL   J Biol Chem 278 (40), 38758-38764 (2003)
   PUBMED   12874278
REFERENCE   5  (bases 1 to 1232)
  AUTHORS   Reynaud,C., Fabre,S. and Jalinot,P.
  TITLE     The PDZ protein TIP-1 interacts with the Rho effector rhotekin and
            is involved in Rho signaling to the serum response element
  JOURNAL   J Biol Chem 275 (43), 33962-33968 (2000)
   PUBMED   10940294
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jan 12, 2022 this sequence version replaced XM_006246761.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ220071.1, FQ215653.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-92                JAXUCZ010000010.1  58294357-58294448
            93-212              JAXUCZ010000010.1  58297213-58297332
            213-290             JAXUCZ010000010.1  58297580-58297657
            291-1232            JAXUCZ010000010.1  58297934-58298875
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..1232
                     /gene="Tax1bp3"
                     /note="Tax1 binding protein 3"
                     /db_xref="GeneID:360564"
                     /db_xref="RGD:1308924"
     exon            1..92
                     /gene="Tax1bp3"
                     /inference="alignment:Splign:2.1.0"
     CDS             54..428
                     /gene="Tax1bp3"
                     /note="isoform 1 is encoded by transcript variant 1;
                     tax1-binding protein 3; Tax1 (human T-cell leukemia virus
                     type I) binding protein 3"
                     /codon_start=1
                     /product="tax1-binding protein 3 isoform 1"
                     /protein_id="NP_001386499.1"
                     /db_xref="GeneID:360564"
                     /db_xref="RGD:1308924"
                     /translation="MSYIPGQPVTAVVQRVEIHKLRQGENLILGFSIGGGIDQDPSQN
                     PFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSE
                     EVVRLLVTRQSLQKAVQQSMLS"
     exon            93..212
                     /gene="Tax1bp3"
                     /inference="alignment:Splign:2.1.0"
     exon            213..290
                     /gene="Tax1bp3"
                     /inference="alignment:Splign:2.1.0"
     exon            291..1232
                     /gene="Tax1bp3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attctcgctg ggggtctcac cgggcgctgt ctccttgtca gatttcgatc gaaatgtcct
       61 acatcccggg ccagcctgtc accgccgtag tgcaaagagt tgaaattcat aagttgcggc
      121 aaggtgaaaa cttaatcctg ggcttcagta ttggaggtgg gatcgaccag gacccttccc
      181 agaatccctt ctcagaagat aaaacagaca agggcattta cgtaacacga gtgtctgagg
      241 gaggtcctgc tgaaattgct gggctgcaga ttggagacaa gatcatgcag gtgaacggct
      301 gggacatgac catggtcact catgaccagg ctcggaagcg gctcaccaaa cgttcggagg
      361 aagtggtccg cctgctggtg actcggcagt ctctgcagaa ggccgtacag cagtccatgc
      421 tgtcatagct gtagtcagcc tagacttctg cccactgacc tttttgggca ctgagaacac
      481 atccacgctc tgtctgtatc tagttctggc ttctgctgtg tgctaggccc cagctctgag
      541 gagtaacagc tgatcccaaa ggtccaagcc aaccttctta cccctcagcc cccagcccga
      601 ggccatagca ccagctcttt ctctcagaca ctgaggattg gaaataaggg cctggagtaa
      661 tacccagtct tcagtaacca taggcccagc cagagacctg tggtggttca gccacagcag
      721 gggctgggca gaaaacccct ctgagctgcc aaagcttgta agtgccaagt aagccccttt
      781 cctcccagca tgctctggct gaaggggttg gccctgccct gacaccttct cagtgcctct
      841 ccctatgctt ccccaatgat ggtgcccagc ctggggctgg gcccacatat gccagtatga
      901 aggccgcctg gatgaagagg gcaggctccc actcccttca tttcccctaa tgggtgctgg
      961 cctccccaca agtttcaaga ctgacatttc aaggcagctc tcaggactgc catttttctc
     1021 tacacctgtg ggtttagctt ttgtattttt taagtcacaa ctttgataca aaagtgtttc
     1081 tatcttactg tttgaattta gcttactaat tcacacacct ggaagcagca acttgtagca
     1141 tgtaaccaag ccagttggtt actctggaaa tgggacagta tgatgccatc ccatgttgaa
     1201 cacttgcgtc caataaacaa cgctggaatt ca
//
