LOCUS       NM_001109252            2875 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus TatD DNase domain containing 2 (Tatdn2), mRNA.
ACCESSION   NM_001109252 XM_001078895 XM_575644
VERSION     NM_001109252.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2875)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473957.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001078895.1, XM_575644.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132263 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2875
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..2875
                     /gene="Tatdn2"
                     /note="TatD DNase domain containing 2"
                     /db_xref="GeneID:500295"
                     /db_xref="RGD:1586017"
     exon            1..176
                     /gene="Tatdn2"
                     /inference="alignment:Splign:2.1.0"
     exon            177..587
                     /gene="Tatdn2"
                     /inference="alignment:Splign:2.1.0"
     CDS             183..2504
                     /gene="Tatdn2"
                     /codon_start=1
                     /product="putative deoxyribonuclease TATDN2"
                     /protein_id="NP_001102722.1"
                     /db_xref="GeneID:500295"
                     /db_xref="RGD:1586017"
                     /translation="MASERRKVKYHWGSTSEGCPSKRSRPREPRNVAPSSRPGRRFAS
                     RPRGASSPQRLKVRRGDDVARAPRSSARRRTSSSSSLSSLSSGSGAGGAASPGFLSAS
                     PRRLLTSKGSSLHPAHSSLEEMASLRKEACSVKVDSKDSSCRSTNSEFSTEAEGQSDA
                     MEEPSKFQKRKKDRLQDQGSRMIYLKAIQGILGKSMPKRKGEAATTQGKAGLGEYSNQ
                     EGPIKKVEGPARSVEGPTRSQEELVKSIEEGPVGKVTVTVPQKEESHTKVRVEKEEST
                     LDRNSFCDRRVIVDSVKKTSEELLGDRRTVIDKPSPALEIFDNSDSHEGVQKHTDREV
                     VMEYPSSGSDWSDVDELATVRFSQEEPVSLKYSAVPESSSFPTDYVMYPPHLYSSPWC
                     DYASYWTSSHKTPGYPLVESSSRDSAQAEKSSQDRLSVHSSKSTVSTQSISKGLDISH
                     KSRSQNSHSLQFSRSIEEKEVKGKRAFQEETPLHHTREHTSSSLPRSHRELSLEEGFI
                     DTHCHLDMLYSKLSFKGTFTKFRKMYSSSFPKEFQGCISDFCDPRTLTDGLWEELLKE
                     DLVWGAFGCHPHFARYYNESQERKLLHALRHPKAVAFGEMGLDYSHKCTTPVPEQHQV
                     FERQLQLAVSLKKPLVIHCREADEDLLDIMKKFVPSDYKIHRHCFTGSYSVIEPLLKY
                     FPNMSVGFTAVVTYSSAWKARDAIRQIPLERIIVETDAPYFLPRQVPRSLCQYAHPGL
                     ALHTVREIARVKEESLSHTLSVLRENTSRLYSL"
     exon            588..1166
                     /gene="Tatdn2"
                     /inference="alignment:Splign:2.1.0"
     exon            1167..2051
                     /gene="Tatdn2"
                     /inference="alignment:Splign:2.1.0"
     exon            2052..2179
                     /gene="Tatdn2"
                     /inference="alignment:Splign:2.1.0"
     exon            2180..2363
                     /gene="Tatdn2"
                     /inference="alignment:Splign:2.1.0"
     exon            2364..2537
                     /gene="Tatdn2"
                     /inference="alignment:Splign:2.1.0"
     exon            2538..2875
                     /gene="Tatdn2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgctgctccg gaagcgcctc ggcgtctcgg gagtggcgcg gtgttgacag ctgcgcttgc
       61 cgacttcggc tgcgcgtcgt tcgggttcgg cgctcggccc gtgggcgctt ctcggagcgg
      121 tgtggcgtcc ctgaagcccg cagcactggg atgggcagac gacaggaacg ggaaaggtgc
      181 ccatggcgtc ggaacggcgc aaggtcaagt atcactgggg cagcacgtcg gaagggtgtc
      241 ccagcaagcg cagccgcccc cgggagcccc gcaatgtggc cccctccagc cggccaggtc
      301 gcaggtttgc gtcgcgtcct cgaggggcca gcagccccca gcgtctgaaa gtccggcgcg
      361 gggacgatgt ggcccgcgcg cctcggagct cagcccgtcg ccgcacctcc tcttcctctt
      421 cgttgtcctc tctttcttcg ggctcaggtg cgggtggggc cgcatcccct ggcttcctgt
      481 ctgcgagccc tcgcagatta cttacgtcca aaggatcctc tctgcaccct gcccactcct
      541 ccctagaaga aatggcttct ctgcggaagg aagcttgtag cgtgaaggtt gattctaaag
      601 atagttcttg tcgctctacg aactctgaat tttcaacaga agctgagggt cagagtgatg
      661 ctatggagga acccagcaag ttccagaaaa ggaagaagga caggcttcaa gaccagggtt
      721 caagaatgat ctacctgaag gccatccagg gcatcctggg gaagtcgatg cccaagagga
      781 agggagaggc tgccaccact caggggaagg caggcttggg agagtattct aaccaggaag
      841 gaccaatcaa gaaggtggaa ggaccagcca ggagtgtgga aggaccgacc aggagccagg
      901 aagaactggt caagagcata gaagaaggac cagtcggaaa ggttacagtt actgttcctc
      961 agaaagagga gtcgcataca aaggttaggg tggagaagga agagtctacg ctagacagga
     1021 atagcttttg tgacagaaga gtgattgtag attctgtgaa gaaaactagt gaggaactgc
     1081 ttggtgaccg aaggacagtc atcgacaaac cctctccagc cctagaaatt tttgataact
     1141 ctgactctca tgaaggtgtt caaaagcaca cagacagaga ggtggtgatg gagtatccct
     1201 cttcagggag cgactggtcg gatgtggatg agctggccac tgtgaggttc tcccaagagg
     1261 aacctgtctc actgaagtac tcagcagttc cagagtcatc ttccttccca actgactatg
     1321 ttatgtaccc tcctcatttg tatagtagcc cctggtgtga ctatgctagc tattggacta
     1381 gcagccataa gacacctggt tatccattgg tggaatccag cagccgtgac tcagcacagg
     1441 ctgagaagag cagccaggat cgtctgagtg ttcactcctc caagtccaca gtgagtaccc
     1501 agagcatctc caaagggttg gacatttccc ataaaagtag gtcccagaat tcccactcac
     1561 ttcagttctc cagaagcata gaggagaagg aggtgaaggg gaagagggca ttccaagagg
     1621 agacaccact tcatcacacc agagaacaca catctagctc tttgccaagg agccaccggg
     1681 agctgagcct ggaagagggc ttcattgata cccactgtca tctggacatg ctctactcca
     1741 agctgtcttt caaggggacc tttacaaagt tcagaaagat gtatagtagc tccttcccta
     1801 aggagtttca aggctgcatc tctgacttct gtgatccaag gacactgact gatggcctat
     1861 gggaggaact cctgaaagaa gatctggttt ggggagcctt tggctgtcac cctcattttg
     1921 cacgatacta taatgagagt caagaaagaa agcttttgca tgccttacgc caccccaagg
     1981 ctgtggcatt tggggagatg ggcctggact actctcacaa gtgcaccaca ccagttccgg
     2041 agcagcacca ggtgtttgag aggcagttgc agctggctgt gtctctgaag aagcccttgg
     2101 taattcactg ccgtgaagct gatgaagatt tgttggacat catgaaaaaa tttgtgccct
     2161 ctgactacaa gatccatagg cactgcttca ctggcagcta ctcagtcatc gagcccttgt
     2221 tgaagtactt ccctaacatg tcggtgggct tcacagcagt ggtgacctac tcttccgcct
     2281 ggaaggctcg ggatgccatc agacagatcc cgttggagag gatcattgtg gaaacagatg
     2341 caccctactt tctccctcgc caggtgccga gaagtctttg ccagtatgcc catccaggct
     2401 tggccttgca cacagttcga gagattgcca gggtcaaaga ggagtcactt tcccacactc
     2461 tgtcggtcct ccgagagaac accagtcgcc tctacagtct ttgagcagga aacatgagca
     2521 ggcaccttct ggcaaaggat gaccagtggc ctggtagtat aggacgggct cccatctgtt
     2581 tgtgtccaag gtgaaggatg tgttggagat cctgtcaaaa ctcagcaaac caggatgtta
     2641 ccttggaacc tcatcacaag gcttcacttg ctggttgttg ggcgggcggg tactgtggaa
     2701 tggatttgag gtgaggagtc ctttcgcctg ctggctacaa ggctccaggg taattggtga
     2761 acaacagaaa gaaaaacata acacagagta caatgagatg gtaccagtct ggatcgctgc
     2821 cctttggcct gggtttccca gcaatctgaa taaagtcacc tctttatcta agcac
//
