LOCUS       XM_039105026            2187 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus taspase 1 (Tasp1), transcript variant
            X10, mRNA.
ACCESSION   XM_039105026
VERSION     XM_039105026.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039105026.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2187
                     /gene="Tasp1"
                     /gene_synonym="RGD1308591"
                     /note="taspase 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 ESTs, 1 long SRA read,
                     1 Protein, and 97% coverage of the annotated genomic
                     feature by RNAseq alignments, including 35 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:311468"
                     /db_xref="RGD:1308591"
     CDS             259..1314
                     /gene="Tasp1"
                     /gene_synonym="RGD1308591"
                     /codon_start=1
                     /product="threonine aspartase 1 isoform X7"
                     /protein_id="XP_038960954.1"
                     /db_xref="GeneID:311468"
                     /db_xref="RGD:1308591"
                     /translation="MQAIEKLQAGALATDAVMAALVELEDSPFTNAGVGSNLNLLGEI
                     ECDASIMDGKSLSFGAVGALSGIKNPVSVAHRLLCEGQKGKLSAGRIPPCFLVGEGAY
                     RWAVDHGIPSCPPSTMTTRFSLAAFKRNKRKLELAERVETDFIQLKRRRQSSAKENDS
                     GALDTVGAVVVDHEGNVAAAVSSGGLALKHPGRVGQAALYGCGCWAENTGAHNPYSTA
                     VSTSGCGEHLVRTILARECSHALQAEDAHQALLETMQNKFISSPFLASEDGVLGGVIV
                     LRSCRCPSESDPSQDKQTLLVEFLWSHSTESMCVGYMSAQDGKAKTHISRLPPGAVAG
                     QSVAIEGGVCRLESPVN"
ORIGIN      
        1 gggcgagcga ctacttcctg tgtaatgagt gctctgcgct gacgcggggt gactcctttt
       61 gcagtttctt ttgcatggaa ggatgctttt ttcctgatag aagatgataa tcttggagaa
      121 tgatcatgga gaaggggatg aattctggag aaggactgcc ttccagatcc tctcaggcat
      181 ctgctgctaa aataacagtc aaggagttag aaacacagca gccctgtaag gagaaacgag
      241 ggggctttgt gctggtgcat gcaggcaatt gagaagctac aggctggtgc ccttgcgaca
      301 gatgcagtga tggctgctct ggtggaactt gaggattctc cttttacaaa tgcaggagtt
      361 ggatctaatc taaatctctt aggagagatc gaatgtgatg ccagcataat ggatgggaag
      421 tccttaagct tcggagccgt aggagcactg agtggaatca agaatccagt atcagttgca
      481 cacagactct tgtgtgaagg gcagaagggc aagctgtctg caggccggat tcctccttgc
      541 tttttagttg gagaaggagc ctacagatgg gcagtggatc atgggatacc ctcttgccct
      601 cctagcacca tgaccacaag attcagctta gctgcattta aaaggaacaa gaggaaacta
      661 gagctggcag aaagggtgga aacagacttc atccagctaa agagaagaag acaatcaagt
      721 gcaaaggaaa atgactcggg cgctttggac acagtgggtg ctgtggttgt cgatcatgaa
      781 gggaatgttg ctgctgctgt ctccagtgga ggcttggcct tgaaacatcc agggagagtt
      841 gggcaggctg ctctttatgg atgtggctgc tgggctgaaa atactggagc tcataacccc
      901 tactccacag ctgtgagtac ctcaggatgt ggagagcatc ttgtgcgcac catactggct
      961 agagaatgtt cacacgcttt acaagctgaa gacgctcacc aagctctgtt ggagactatg
     1021 caaaacaagt ttatcagttc acctttcctt gccagtgaag acggcgtgct cggcggggtg
     1081 atcgtcctcc ggtcatgcag atgtccttca gagtctgacc cctcccaaga taaacagaca
     1141 ttgctcgtgg aatttctgtg gagccacagt acagagagca tgtgcgtggg ctatatgtca
     1201 gcccaggatg gcaaagccaa gactcacatt tccagactcc ctcctggtgc tgtggcagga
     1261 cagtctgttg caatcgaagg tggggtttgc cgcctggaga gccctgtgaa ctgactccag
     1321 gctgactacg aagtgtctgc gaggcatttc agaacctgag ctttggctgt tcagttgaag
     1381 ttggatgttt tatcttcctt gttttgtaat tcttattgca acctcgggca ctgcttggga
     1441 cacttaagtg ctgctatact tagtgctggt tgacactcga gtcttaggcg gatgagcgga
     1501 gcatgtgtga gtgtgtgtcc gtgtgcagtg tgtgtgcttg cttctccctg atgggataag
     1561 atctcctcaa gtgtaaccta tgaacgagaa tgattaactc tttacaaaat gtgtgcttta
     1621 actgtttaca agtaaaccta aagttgtaga aaacttttat ttcataaaga ggtaccaact
     1681 atggttgata caatgtgtct gaactgaaga gtgaatctgc ttgttaaaat gacttgactt
     1741 tgattgtagc ccatttaatc acaggaatca ataatctggt gtcagtttaa gtggatggtg
     1801 tggtaactta aatggttgtt ctcacccctc acacagggca attttcttga acacagagtg
     1861 gtttcagtga aaccattcta gcagagaatt aaagtcagaa ccttttaaag taatggtctt
     1921 attgataaag tttgtgcttc tttcctgagc tatttgaagc ttaagtatcg catagcttcg
     1981 cgccgtgtgt agtatattat gagagaatat gtaaagagag tgttcagtaa cacacagttt
     2041 taatttgtgt ataatggaat gttatttaca atgtaacact gtaaataaga aagcaaagtt
     2101 tatgggaaaa ttcaatatta tctttgtttc ttgtttaaat atatttttaa gataaaggta
     2161 caaaaataaa agaagcatat tactggg
//
