LOCUS       NM_001109318            1558 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus TLR adaptor interacting with endolysosomal
            SLC15A4 (Tasl), mRNA.
ACCESSION   NM_001109318 XM_001061435 XM_576974
VERSION     NM_001109318.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Harris VM, Harley ITW, Kurien BT, Koelsch KA and Scofield RH.
  TITLE     Lysosomal pH Is Regulated in a Sex Dependent Manner in Immune Cells
            Expressing CXorf21
  JOURNAL   Front Immunol 10, 578 (2019)
   PUBMED   31001245
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473966.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_576974.2, XM_001061435.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: DV721919.1, BF287785.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMEA5760383, SAMEA5760400 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq21"
     gene            1..1558
                     /gene="Tasl"
                     /gene_synonym="RGD1565785"
                     /note="TLR adaptor interacting with endolysosomal SLC15A4"
                     /db_xref="GeneID:501570"
                     /db_xref="RGD:1565785"
     exon            1..135
                     /gene="Tasl"
                     /gene_synonym="RGD1565785"
                     /inference="alignment:Splign:2.1.0"
     exon            136..1558
                     /gene="Tasl"
                     /gene_synonym="RGD1565785"
                     /inference="alignment:Splign:2.1.0"
     CDS             137..1033
                     /gene="Tasl"
                     /gene_synonym="RGD1565785"
                     /note="uncharacterized protein CXorf21 homolog"
                     /codon_start=1
                     /product="TLR adapter interacting with SLC15A4 on the
                     lysosome"
                     /protein_id="NP_001102788.1"
                     /db_xref="GeneID:501570"
                     /db_xref="RGD:1565785"
                     /translation="MLSEGYLSGLTYWNDIHWNCASYNEPVAGDQGEETSSVAALSYS
                     SVDETQVQSVYVSCKSSGKFISSVHARASQHSRSQSRTVLQANSNPVFESPTLAAVGI
                     CRDVIRETYLVPPSCKSICKNYNDLHIAGGQVMAINSVMADFPSESSFEDGPLLKSSE
                     ISLSMEDSISTQFTELPLKPIQRYSSYWRITSIKEKNSLQMQKPISNAVLNEYLEQKV
                     VELYKQYIMDTVFHDSSPTQILASEFIMTNVDQISLQVSKEKNLDTSKVKDIVISHLL
                     QLVSSEISTPSLHISQYSDITP"
ORIGIN      
        1 ggcagctcag tgtcttagtg gcctcgtctg tgagaggctt gagaacgttt tgcaaagagc
       61 cctgaccagc tagttcttct ctatttgatc agtcattgtg ttgctacagg attcaaggag
      121 cagactctgg tgaagaatgc tgtcagaagg atatctcagt ggacttacct actggaatga
      181 cattcattgg aattgtgcat cttataatga accggtggct ggggaccagg gtgaggagac
      241 aagttccgtt gctgctcttt catattcctc tgtggatgaa acacaagttc aaagtgttta
      301 tgtgagctgc aaatcctctg ggaagtttat ttcatcagtg catgcaagag cgagtcagca
      361 cagcagaagc cagagcagaa cagtgctgca ggcaaactcc aacccggtat ttgaaagtcc
      421 gaccttagcc gcagttggca tatgcagaga tgtgatcagg gaaacctacc tggttccacc
      481 ttcttgtaaa agtatttgca aaaattacaa tgacttacat attgcagggg ggcaggtgat
      541 ggccattaac tcagtaatgg cagattttcc ctctgagagc agctttgaag atggtccttt
      601 gctaaagtca tctgagattt ctttgtccat ggaggattcc atttccactc agttcactga
      661 acttcccctc aaacctatcc agcggtactc atcctactgg aggataacca gcatcaaaga
      721 gaaaaacagc ctgcaaatgc agaagcctat ttcaaatgca gtgctcaacg agtacctgga
      781 acagaaggtg gtggagttat ataagcaata cattatggac actgtgtttc acgacagttc
      841 tcctacccag attctggcat cagaattcat catgacaaat gtagatcaaa ttagtcttca
      901 agtgtctaaa gagaagaacc tggacacttc gaaagtcaag gacatagtta ttagccatct
      961 attgcagttg gtatcatctg agatcagcac ccccagtctc catatttctc agtatagcga
     1021 tataactcca tagagaagat tcctgtcaat tcccctcatt cctatcaatc ccaagggaat
     1081 gttgtattca tttgatcaga ggatgtgatg gagggaatta tggaagggaa ttaatgacta
     1141 gtaaagggga gtttgagaaa tctcacactg aagggataca ggcagaggga ccacaagaat
     1201 ggtttcaagg gtaagtttat atagaatcaa agcaaaaata aaaatgatca cagagagaaa
     1261 gaagatattg tgacttaaat ttaggagtac tggaattgga agatatacca aaccaggaac
     1321 aaaaggaaac actatggcaa actagaaagt caactgattt gagaattggg aattaaacac
     1381 ctgtttccta tttatataca ttttgcctag gttgtttctt ctggagagaa atggaccaca
     1441 agaaggttgt aaattccagt ggactgacat ttttccaagt ataagcttgt atcttttccc
     1501 tctatgctgt atcagtaagt catttaggta tactctttgt aaatattaaa tgaataac
//
