LOCUS       XM_039079665            1028 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Tarbp2 subunit of RISC loading complex
            (Tarbp2), transcript variant X15, mRNA.
ACCESSION   XM_039079665
VERSION     XM_039079665.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039079665.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1028
                     /gene="Tarbp2"
                     /note="Tarbp2 subunit of RISC loading complex; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 ESTs, 1 long SRA read, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     118 samples with support for all annotated introns"
                     /db_xref="GeneID:363006"
                     /db_xref="RGD:1307375"
     CDS             191..757
                     /gene="Tarbp2"
                     /codon_start=1
                     /product="RISC-loading complex subunit TARBP2 isoform X9"
                     /protein_id="XP_038935593.1"
                     /db_xref="GeneID:363006"
                     /db_xref="RGD:1307375"
                     /translation="MVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKML
                     LRVHTVPLDARDGNEAEPDDDHFSIGVSSRLDGLRNRGPGCTWDSLRNSVGEKILSLR
                     NCSVGSLGSLGSACCSILSELSAEQAFHVSYLDIEELSLSGLCQCLVELSTQPATVCY
                     GSATTREAARGDAARRALQYLRIMAGSK"
ORIGIN      
        1 cgcgactccg ggcttggccc cggccctagc tcgtcggcgg tgtactgggg tgcgtggaga
       61 ctgtagtcac ggtggcgccc gcggggacgg aggagggaat gagtgaagag gatcagggct
      121 ccggctctac tacaggctgc gggctgccca ggagctggtg gtgcagaaag gctggcgttt
      181 gccagagtac atggtgaccc aggagtctgg gcctgctcac cgcaaagagt tcaccatgac
      241 ctgccgggtg gagcgtttca ttgagattgg cagtgggacc tccaagaagc tggcaaagcg
      301 caacgcggca gctaagatgc tgcttcgagt gcacacggta cctctggatg cccgcgacgg
      361 caacgaggct gaacctgatg acgatcattt ttccattggc gtgagctccc gcctggatgg
      421 actaaggaac cgtgggccag gctgcacctg ggattcctta cggaattctg tgggagaaaa
      481 gatcctgtcc cttcgcaatt gctccgtggg ctctctgggg tctttgggct ctgcctgctg
      541 cagcatcctc agtgagctct ctgcggagca ggctttccat gtcagctatc tggatattga
      601 ggaactgagc ctgagtgggc tctgccagtg tctagtggag ctgtccacgc agccagccac
      661 tgtgtgttat ggttctgcca ctaccaggga ggcagcccga ggtgatgctg ctcgccgcgc
      721 actacagtac ctcaggatca tggccggtag caaatagcac ccactacagt gatggatatc
      781 tgttacttct tgctccttct gccctgggtc tatgcgtctg cctagctctg gtgccctcca
      841 gaggtgccat ctctacctct gacacagctt gcctgccttg agactgagga aggcaaaggc
      901 aagcaaggag ccatgaacca cagggcccca gccagcgcag ggtttgccct cattccatgg
      961 atgatgaatg aaaggaaatt ggaattctat tggaatccag aataaatgct gctctttggc
     1021 ttcttaaa
//
