LOCUS       XM_039079664            1152 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Tarbp2 subunit of RISC loading complex
            (Tarbp2), transcript variant X14, mRNA.
ACCESSION   XM_039079664
VERSION     XM_039079664.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1152
                     /gene="Tarbp2"
                     /note="Tarbp2 subunit of RISC loading complex; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 ESTs, 2 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     69 samples with support for all annotated introns"
                     /db_xref="GeneID:363006"
                     /db_xref="RGD:1307375"
     CDS             315..881
                     /gene="Tarbp2"
                     /codon_start=1
                     /product="RISC-loading complex subunit TARBP2 isoform X9"
                     /protein_id="XP_038935592.1"
                     /db_xref="GeneID:363006"
                     /db_xref="RGD:1307375"
                     /translation="MVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKML
                     LRVHTVPLDARDGNEAEPDDDHFSIGVSSRLDGLRNRGPGCTWDSLRNSVGEKILSLR
                     NCSVGSLGSLGSACCSILSELSAEQAFHVSYLDIEELSLSGLCQCLVELSTQPATVCY
                     GSATTREAARGDAARRALQYLRIMAGSK"
ORIGIN      
        1 ggcgggggac tccagatccc agcatgcccc gcggcgggcc ctaccggccg cgactccggg
       61 cttggccccg gccctagctc gtcggcggtg tactggggtg cgtggagact gtagtcacgg
      121 tggcgcccgc ggggacggag gagggaatga gtgaagagga tcagggctcc ggctctacta
      181 caggctgcgg gctgcccaga ctcttcagtg cctgaggaca ctgctgtcat tgctgcagaa
      241 gctgctgccc ctgttccatc tgctttacta accaggagct ggtggtgcag aaaggctggc
      301 gtttgccaga gtacatggtg acccaggagt ctgggcctgc tcaccgcaaa gagttcacca
      361 tgacctgccg ggtggagcgt ttcattgaga ttggcagtgg gacctccaag aagctggcaa
      421 agcgcaacgc ggcagctaag atgctgcttc gagtgcacac ggtacctctg gatgcccgcg
      481 acggcaacga ggctgaacct gatgacgatc atttttccat tggcgtgagc tcccgcctgg
      541 atggactaag gaaccgtggg ccaggctgca cctgggattc cttacggaat tctgtgggag
      601 aaaagatcct gtcccttcgc aattgctccg tgggctctct ggggtctttg ggctctgcct
      661 gctgcagcat cctcagtgag ctctctgcgg agcaggcttt ccatgtcagc tatctggata
      721 ttgaggaact gagcctgagt gggctctgcc agtgtctagt ggagctgtcc acgcagccag
      781 ccactgtgtg ttatggttct gccactacca gggaggcagc ccgaggtgat gctgctcgcc
      841 gcgcactaca gtacctcagg atcatggccg gtagcaaata gcacccacta cagtgatgga
      901 tatctgttac ttcttgctcc ttctgccctg ggtctatgcg tctgcctagc tctggtgccc
      961 tccagaggtg ccatctctac ctctgacaca gcttgcctgc cttgagactg aggaaggcaa
     1021 aggcaagcaa ggagccatga accacagggc cccagccagc gcagggtttg ccctcattcc
     1081 atggatgatg aatgaaagga aattggaatt ctattggaat ccagaataaa tgctgctctt
     1141 tggcttctta aa
//
