LOCUS       XM_017598033            1627 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transport and golgi organization 2
            homolog (Tango2), transcript variant X16, mRNA.
ACCESSION   XM_017598033
VERSION     XM_017598033.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017598033.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017598033.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1627
                     /gene="Tango2"
                     /gene_synonym="RGD1310348"
                     /note="transport and golgi organization 2 homolog; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 ESTs, 12 long SRA reads, 12 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 223 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:360738"
                     /db_xref="RGD:1310348"
     CDS             187..1017
                     /gene="Tango2"
                     /gene_synonym="RGD1310348"
                     /codon_start=1
                     /product="transport and Golgi organization protein 2
                     homolog isoform X8"
                     /protein_id="XP_017453522.1"
                     /db_xref="GeneID:360738"
                     /db_xref="RGD:1310348"
                     /translation="MCIIFFKFDPRPVSKNAYRLILAANRDESYHRPSKLADFWENNS
                     EILSGLDMEEGKAGGTWLGISTRGKLGALTNYLQPRQEPDARGRGELVSHFLTSDMDS
                     LSYLKKVSTEGHLYNGFNLIAADLSTAKGDVVCYYGNRGEPEPIVLTPGTYGLSNALL
                     ETPWKKLCFGKQLFTEAVERSESLPKDILVTQLLEVLNNEEAQLPDPAIEDQGQEYIQ
                     PILSKYAAVCVRSATYGTRTNTIILVDADGHVTFTERSMLDKDTSCWETNTYEFTLQS
                     "
ORIGIN      
        1 ggccaacaag accacggctg tgggttcggc gctccgcccc tcgctactgc gctcaatagg
       61 gagcgctctg gcggcgggcc gggccggtcc tgggctggca gctaaggtgc gcgggtgcgg
      121 cacccggaag tcggcggcgg cggaggcgac ctcgtgaccg tgcgagcaaa gccacccctg
      181 caacccatgt gcatcatctt ctttaagttc gatcctcgtc ccgtttccaa aaatgcgtac
      241 aggctcatcc tggcagccaa cagagatgaa tcctaccaca ggccgtccaa gttggcagac
      301 ttctgggaga acaacagcga gatcctcagt gggctcgaca tggaagaagg caaggcagga
      361 ggaacatggc tgggcatcag cacacgcggg aagctggggg cactcaccaa ctacctacag
      421 ccccggcaag agccagacgc ccgcggcaga ggtgaacttg tgtctcactt tctgaccagt
      481 gacatggaca gcctgtccta cctgaagaag gtctctacag aggggcacct atacaacggc
      541 tttaacctca tagcagctga cctaagcaca gcaaaaggag atgttgtttg ctactatgga
      601 aaccgggggg agcctgagcc tattgtcttg acaccaggaa cctatgggct aagcaatgcc
      661 ctgctggaga cgccctggaa gaagctgtgc tttggcaagc aactcttcac ggaagcagtg
      721 gagcggagcg agtcactccc taaggacatt cttgtcaccc agctcctaga agtcctcaac
      781 aatgaggagg cacagctgcc agacccagcc attgaggacc agggccagga gtatattcag
      841 ccaatactga gcaagtatgc agctgtgtgt gtccgctctg ccacctatgg caccagaacc
      901 aacaccatca tccttgtgga tgcagatggc catgtgacct tcacagaacg aagcatgctg
      961 gacaaagaca cctcctgctg ggagaccaac acctatgagt tcacactaca gagttagtca
     1021 ctgccaggct cctaagggcc agcatggaca ggaacctttg gtggccaccc tgcatgtctg
     1081 gctcagccag catccctagg accaggtcct tctgatctgt gtcctcgtat tcagctcagg
     1141 gtttgtcttt gtaccaatgg agaatggcag agtcaaatac taggtctgag ttgggcctag
     1201 gtgtatccta tgtgaacaca cgtaccttgg tcagccccac cactactgtg tacacagaca
     1261 cgtgcacctt actgatgagc agggttatgc ctctcacctc acatgtttgg caagtgggtc
     1321 tcttcttccc tggacaggta acaaaagcag actttttttt tttttttaga aactggagac
     1381 cctgtatttg tttgcgttca gtagttccgt atgcacaagg actctgtgtg catttgctca
     1441 atgctgaggt gtggaacctg ggatctctta ggcccctgct tgcccaggac tgtgggttct
     1501 gagcaagacc atttcaccaa atggctcacg cagcccctgc cgtctctcac tgtccgtgtt
     1561 ataagctgta caccatggga tgtgaactcg aatgtgcaca gttgataata aaactttgag
     1621 gctggaa
//
