LOCUS       NM_031811               1225 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus transaldolase 1 (Taldo1), mRNA.
ACCESSION   NM_031811 XM_347293
VERSION     NM_031811.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Jin,E.S., Sherry,A.D. and Malloy,C.R.
  TITLE     Evidence for transaldolase activity in the isolated heart supplied
            with [U-13C3]glycerol
  JOURNAL   J Biol Chem 288 (5), 2914-2922 (2013)
   PUBMED   23235149
  REMARK    GeneRIF: [U-13C3]glycerol is transferred exclusively to carbons 4-6
            of glucosyl units with no enrichment in carbons 1-3. which is
            explained by carbon rearrangements occurring at the level of
            transaldolase.
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   3  (bases 1 to 1225)
  AUTHORS   Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J., Wauben,M.
            and Stoorvogel,W.
  TITLE     MHC class II-associated proteins in B-cell exosomes and potential
            functional implications for exosome biogenesis
  JOURNAL   Immunol Cell Biol 88 (8), 851-856 (2010)
   PUBMED   20458337
REFERENCE   4  (bases 1 to 1225)
  AUTHORS   Moser,K. and White,F.M.
  TITLE     Phosphoproteomic analysis of rat liver by high capacity IMAC and
            LC-MS/MS
  JOURNAL   J Proteome Res 5 (1), 98-104 (2006)
   PUBMED   16396499
REFERENCE   5  (bases 1 to 1225)
  AUTHORS   Veech,R.L.
  TITLE     A humble hexose monophosphate pathway metabolite regulates short-
            and long-term control of lipogenesis
  JOURNAL   Proc Natl Acad Sci U S A 100 (10), 5578-5580 (2003)
   PUBMED   12721358
  REMARK    Review article
REFERENCE   6  (bases 1 to 1225)
  AUTHORS   Verhoeven,N.M., Huck,J.H., Roos,B., Struys,E.A., Salomons,G.S.,
            Douwes,A.C., van der Knaap,M.S. and Jakobs,C.
  TITLE     Transaldolase deficiency: liver cirrhosis associated with a new
            inborn error in the pentose phosphate pathway
  JOURNAL   Am J Hum Genet 68 (5), 1086-1092 (2001)
   PUBMED   11283793
REFERENCE   7  (bases 1 to 1225)
  AUTHORS   Thorell,S., Gergely,P. Jr., Banki,K., Perl,A. and Schneider,G.
  TITLE     The three-dimensional structure of human transaldolase
  JOURNAL   FEBS Lett 475 (3), 205-208 (2000)
   PUBMED   10869557
REFERENCE   8  (bases 1 to 1225)
  AUTHORS   Flanigan,I., Collins,J.G., Arora,K.K., MacLeod,J.K. and
            Williams,J.F.
  TITLE     Exchange reactions catalyzed by group-transferring enzymes oppose
            the quantitation and the unravelling of the identify of the pentose
            pathway
  JOURNAL   Eur J Biochem 213 (1), 477-485 (1993)
   PUBMED   8477719
REFERENCE   9  (bases 1 to 1225)
  AUTHORS   Bublitz,C. and Steavenson,S.
  TITLE     The pentose phosphate pathway in the endoplasmic reticulum
  JOURNAL   J Biol Chem 263 (26), 12849-12853 (1988)
   PUBMED   2843500
REFERENCE   10 (bases 1 to 1225)
  AUTHORS   Casazza,J.P. and Veech,R.L.
  TITLE     The interdependence of glycolytic and pentose cycle intermediates
            in ad libitum fed rats
  JOURNAL   J Biol Chem 261 (2), 690-698 (1986)
   PUBMED   3079759
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC059126.1.
            
            On Aug 31, 2012 this sequence version replaced NM_031811.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC059126.1, FQ213939.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1225              BC059126.1         5-1229
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q41"
     gene            1..1225
                     /gene="Taldo1"
                     /note="transaldolase 1"
                     /db_xref="GeneID:83688"
                     /db_xref="RGD:620674"
     exon            1..111
                     /gene="Taldo1"
                     /inference="alignment:Splign:2.1.0"
     CDS             15..1028
                     /gene="Taldo1"
                     /EC_number="2.2.1.2"
                     /codon_start=1
                     /product="transaldolase"
                     /protein_id="NP_113999.2"
                     /db_xref="GeneID:83688"
                     /db_xref="RGD:620674"
                     /translation="MSGSPVKRQRMESALDQLKQFTTVVADTGDFNAIDEYKPQDATT
                     NPSLILAAAQMPAYQELVEEAIAYGKKLGGPQEEQIKNAIDKLFVLFGAEILKKIPGR
                     VSTEVDARLSFDKDAMVARARRIIELYKEAGISKDRILIKLSSTWEGIQAGKELEEQH
                     GIHCNMTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDKKSYEPQEDPGVKSVT
                     KIYNYYKKFGYKTIVMGASFRNTGEIKALAGCDFLTISPKLLGELLKDSSKLAPTLSV
                     KAAQTSDLEKIHLDEKAFRWLHNEDQMAVEKLSDGIRKFAADAIKLERMLTERMFSAE
                     NGK"
     exon            112..235
                     /gene="Taldo1"
                     /inference="alignment:Splign:2.1.0"
     exon            236..343
                     /gene="Taldo1"
                     /inference="alignment:Splign:2.1.0"
     exon            344..475
                     /gene="Taldo1"
                     /inference="alignment:Splign:2.1.0"
     exon            476..651
                     /gene="Taldo1"
                     /inference="alignment:Splign:2.1.0"
     exon            652..849
                     /gene="Taldo1"
                     /inference="alignment:Splign:2.1.0"
     exon            850..995
                     /gene="Taldo1"
                     /inference="alignment:Splign:2.1.0"
     exon            996..1198
                     /gene="Taldo1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgcgcgttt cgccatgtcg gggtccccgg taaaacgcca gaggatggag tccgccttgg
       61 accagctcaa gcagttcacc accgtggtgg ctgacacggg tgatttcaac gccatcgatg
      121 agtacaagcc ccaggatgcc accaccaacc catccctgat cctggctgca gcacagatgc
      181 ctgcctacca agagctggtg gaggaggcca ttgcctacgg caagaagctg ggtgggccac
      241 aagaggagca gattaaaaat gccattgata aactttttgt gctgtttggg gcagaaatac
      301 taaagaagat tccaggccgt gtatccacag aagtcgatgc aaggctttcc tttgataagg
      361 atgccatggt ggcccgagcc aggcgcatca tagagcttta caaagaagct gggatcagca
      421 aggacagaat tctcatcaag ttatcatcaa cctgggaggg aatccaggcc ggaaaggagc
      481 tggaggagca gcatggcatc cactgcaaca tgacactgct tttctccttc gcccaggccg
      541 tggcctgcgc tgaagcgggc gtgacgctca tctctccctt tgtggggcgc atccttgact
      601 ggcatgtggc aaacacagac aagaaatcct acgaacccca ggaggaccct ggggtgaaga
      661 gtgtcacaaa aatctacaac tactacaaaa agtttggcta caagaccatt gtcatgggtg
      721 cttccttccg taacacgggt gagatcaaag cgctggcagg ctgtgatttc ctcaccatct
      781 cacccaagct tctgggggag ctgctcaagg acagcagcaa gctggcaccc acgctttccg
      841 tcaaagcagc ccagaccagt gacttggaga agatacatct ggacgagaag gccttccgtt
      901 ggctgcacaa tgaggaccaa atggctgtgg agaagctctc tgatgggatc cgcaagtttg
      961 ctgctgatgc cataaagttg gagcggatgc tcacagaacg aatgttcagc gctgagaatg
     1021 ggaaatagtg cagcacctga ggctggaccg cagacctgca ctgccttcga ggggtccgaa
     1081 tcgcacatgg cttgtaacga atgaatcttg cattttttag tgatcagaag ggaaggatta
     1141 taggattctg atttcatgtg aaattttgtc taattcatta aagcagtcgc ttttcctaaa
     1201 aaaaaaaaaa aaaaaaaaaa aaaaa
//
