LOCUS       NM_001013127            1325 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus transgelin 2 (Tagln2), mRNA.
ACCESSION   NM_001013127 XM_222906
VERSION     NM_001013127.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Buhrke,T., Lengler,I. and Lampen,A.
  TITLE     Analysis of proteomic changes induced upon cellular differentiation
            of the human intestinal cell line Caco-2
  JOURNAL   Dev Growth Differ 53 (3), 411-426 (2011)
   PUBMED   21492153
REFERENCE   3  (bases 1 to 1325)
  AUTHORS   Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J., Wauben,M.
            and Stoorvogel,W.
  TITLE     MHC class II-associated proteins in B-cell exosomes and potential
            functional implications for exosome biogenesis
  JOURNAL   Immunol Cell Biol 88 (8), 851-856 (2010)
   PUBMED   20458337
REFERENCE   4  (bases 1 to 1325)
  AUTHORS   Kesimer,M., Scull,M., Brighton,B., DeMaria,G., Burns,K., O'Neal,W.,
            Pickles,R.J. and Sheehan,J.K.
  TITLE     Characterization of exosome-like vesicles released from human
            tracheobronchial ciliated epithelium: a possible role in innate
            defense
  JOURNAL   FASEB J 23 (6), 1858-1868 (2009)
   PUBMED   19190083
REFERENCE   5  (bases 1 to 1325)
  AUTHORS   Gonzalez-Begne,M., Lu,B., Han,X., Hagen,F.K., Hand,A.R.,
            Melvin,J.E. and Yates,J.R.
  TITLE     Proteomic analysis of human parotid gland exosomes by
            multidimensional protein identification technology (MudPIT)
  JOURNAL   J Proteome Res 8 (3), 1304-1314 (2009)
   PUBMED   19199708
REFERENCE   6  (bases 1 to 1325)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC084703.1.
            
            On Apr 20, 2005 this sequence version replaced XM_222906.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC084703.1, FQ223112.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q24"
     gene            1..1325
                     /gene="Tagln2"
                     /note="transgelin 2"
                     /db_xref="GeneID:304983"
                     /db_xref="RGD:1310840"
     exon            1..35
                     /gene="Tagln2"
                     /inference="alignment:Splign:2.1.0"
     exon            36..234
                     /gene="Tagln2"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..654
                     /gene="Tagln2"
                     /codon_start=1
                     /product="transgelin-2"
                     /protein_id="NP_001013145.1"
                     /db_xref="GeneID:304983"
                     /db_xref="RGD:1310840"
                     /translation="MANRGPSYGLSREVQQKIEKQYDPDLEQILIQWITTQCRKGVSQ
                     PQPGRENFQNWLKDGTVLCELINSLYPEGQAPVKKIQASTMAFKQMEQISQFLQAAER
                     YGINTTDIFQTVDLWEGKNMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPR
                     NFSDNQLQEGKNVIGLQMGTNRGASQAGMTGYGMPRQIL"
     exon            235..409
                     /gene="Tagln2"
                     /inference="alignment:Splign:2.1.0"
     exon            410..512
                     /gene="Tagln2"
                     /inference="alignment:Splign:2.1.0"
     exon            513..1297
                     /gene="Tagln2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccgtgtgtg cgctctcatc tagccggctt ggacgttctt caccactgtt cagaatggcc
       61 aacaggggac cttcgtatgg cctgagccga gaggtgcagc agaagattga gaagcagtac
      121 gacccagatc tggagcagat cctgatccag tggattacca ctcagtgccg gaagggtgtg
      181 agccagcccc agccagggcg ggagaacttc cagaactggc tcaaggatgg cacggtgctg
      241 tgcgagctca ttaattcact atatcctgag gggcaggccc cagtaaagaa gatccaggcc
      301 tctacgatgg ccttcaagca gatggagcag atctctcagt tcctgcaagc agccgagcgt
      361 tatggcatta acaccacgga catcttccag actgtggatc tctgggaagg aaagaacatg
      421 gcttgtgtgc agcggacact aatgaacctg ggtgggctgg cagtagccag ggacgatggg
      481 ctcttctctg gggaccccaa ctggtttcct aagaaatcca aggagaaccc tcggaacttc
      541 tcggacaacc agttgcaaga gggcaagaat gtgattgggt tacagatggg caccaaccgt
      601 ggagcctctc aggctggcat gactggctat gggatgccca ggcagatcct ctgatcagac
      661 cctcctcttc ccctgccctc tatgaatggt taatatatat gtatatatat gttttagcag
      721 acattccctg agagcccctg gcttgctaag ctcccctctg ccagggtggg tccaacctat
      781 cttgttacct ctggcagtgc ctgataattg cctctctctc tctgtctctc tctctctctc
      841 tctgggctta ctaatgcatt ccttccccca caaccatcaa aactggacca acaaaaaccc
      901 tgggaccaaa gcctccttct tccagcatgt ttctgccttc ctgacctctg tttttagtcc
      961 attccttggc taggagtcag agatcctgcc ctgtggcccg gtgctgaact gacccttcct
     1021 tctacaagta ggcctctccc tcagctgtgg ctgcaggcac ttcatttata gggaggggcc
     1081 tgtggctgtc actccagcca cagctggacc atacttacca cacatccggg cagcttctcc
     1141 tagcagaggc cctttggctt cttactttcc attcctctca cttgtggcta aggggtggag
     1201 tggaggagac agaggtaaaa gagctgccca ccgtggtctg gggcttgagg aacatgagtt
     1261 tgctgatttt aagtaataaa aaatctcatt ctcttttaaa aaaaaaaaaa aaaaaaaaaa
     1321 aaaaa
//
