LOCUS       NM_001191991            1827 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus TAFA chemokine like family member 5 (Tafa5),
            mRNA.
ACCESSION   NM_001191991 XM_576324
VERSION     NM_001191991.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Wang,Y., Chen,D., Zhang,Y., Wang,P., Zheng,C., Zhang,S., Yu,B.,
            Zhang,L., Zhao,G., Ma,B., Cai,Z., Xie,N., Huang,S., Liu,Z., Mo,X.,
            Guan,Y., Wang,X., Fu,Y., Ma,D., Wang,Y. and Kong,W.
  TITLE     Novel Adipokine, FAM19A5, Inhibits Neointima Formation After Injury
            Through Sphingosine-1-Phosphate Receptor 2
  JOURNAL   Circulation 138 (1), 48-63 (2018)
   PUBMED   29453251
  REMARK    GeneRIF: Novel adipokine, FAM19A5, was capable of inhibiting
            postinjury neointima formation via sphingosine-1-phosphate receptor
            2-G12/13-RhoA signaling.
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Paulsen,S.J., Christensen,M.T., Vrang,N. and Larsen,L.K.
  TITLE     The putative neuropeptide TAFA5 is expressed in the hypothalamic
            paraventricular nucleus and is regulated by dehydration
  JOURNAL   Brain Res 1199, 1-9 (2008)
   PUBMED   18275939
  REMARK    GeneRIF: we found TAFA5 mRNA to be highly expressed in the
            hypothalamic paraventricular nucleus (PVN) where it co-localized
            with vasopressin and oxytocin in magno- and parvocellular neurons.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Jul 17, 2010 this sequence version replaced XM_576324.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.41546.1,
                                           SRR26360176.1319074.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-124               JAXUCZ010000007.1  120493606-120493729
            125-274             JAXUCZ010000007.1  120634535-120634684
            275-402             JAXUCZ010000007.1  120676655-120676782
            403-1827            JAXUCZ010000007.1  120712633-120714057
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..1827
                     /gene="Tafa5"
                     /gene_synonym="Fam19a5; RGD1562115; Tafa-5"
                     /note="TAFA chemokine like family member 5"
                     /db_xref="GeneID:500915"
                     /db_xref="RGD:1562115"
     exon            1..124
                     /gene="Tafa5"
                     /gene_synonym="Fam19a5; RGD1562115; Tafa-5"
                     /inference="alignment:Splign:2.1.0"
     CDS             13..411
                     /gene="Tafa5"
                     /gene_synonym="Fam19a5; RGD1562115; Tafa-5"
                     /note="protein FAM19A5; family with sequence similarity 19
                     member A5, C-C motif chemokine like; family with sequence
                     similarity 19 (chemokine (C-C motif)-like), member A5;
                     chemokine-like protein TAFA-5"
                     /codon_start=1
                     /product="chemokine-like protein TAFA-5 precursor"
                     /protein_id="NP_001178920.1"
                     /db_xref="GeneID:500915"
                     /db_xref="RGD:1562115"
                     /translation="MAPSPRTSSRQDATALPSMSSTFWAFMILASLLIAYCSQLAAGT
                     CEIVTLDRDSSQPRRTIARQTARCACRKGQIAGTTRARPACVDARIIKTKQWCDMLPC
                     LEGEGCDLLINRSGWTCTQPGGRIKTTTVS"
     exon            125..274
                     /gene="Tafa5"
                     /gene_synonym="Fam19a5; RGD1562115; Tafa-5"
                     /inference="alignment:Splign:2.1.0"
     exon            275..402
                     /gene="Tafa5"
                     /gene_synonym="Fam19a5; RGD1562115; Tafa-5"
                     /inference="alignment:Splign:2.1.0"
     exon            403..1827
                     /gene="Tafa5"
                     /gene_synonym="Fam19a5; RGD1562115; Tafa-5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 accgcggctt caatggcgcc atcgcccagg accagcagcc ggcaagatgc gaccgccctg
       61 cccagcatgt cctcaacttt ttgggcattc atgatcctgg ccagcctgct catcgcctac
      121 tgcagtcagc tggccgctgg aacctgtgag attgtgaccc tagaccggga cagcagccag
      181 ccacggagga cgatcgcccg gcagacagca cgctgtgcat gcagaaaggg gcagatagca
      241 ggcaccacgc gagcccggcc tgcttgtgtg gacgctcgaa ttatcaagac aaagcagtgg
      301 tgtgacatgc ttccttgcct ggagggggaa ggctgtgact tgttaatcaa ccggtcaggc
      361 tggacttgca cacagccagg agggcggata aagaccacca cggtctcctg acaatcgcag
      421 cccctgcggt gccccctggg agtggctgtg gctccccgga gattctacac ctcagccaca
      481 gtcctccatc ctgtgtggac atcgctcgac ctcccccatc cacccactgt ttcccagagg
      541 cctaacaaag acatcccaat tcctcggagc tctgagctta agtctgtcca gctgaaccca
      601 ggaggccggg actcagacac acatgtcaag ggtggtgcca ggaatcagca atacctggtg
      661 tgtagagccc ggctacattc atcctcacta gccgcttgct ccctggagtt ggaggaccag
      721 aacaaggaga ctgcggcccg gccagctgag ccacaacgca aggtccgggg actgtcaggt
      781 gcagaagcca ccacctcctc tgtcccagac tgtctgaatc gcttttattt tcttatactt
      841 tcagtatact caatagacca aagagcaaat ctattttaac gtggacacat ccctgctgcc
      901 aagagttccc ccaggtttga ttgtggggcg ggggagggca cagtggcaga catgctggtg
      961 gcccaggcac catggagagg gcatccaagg ccaagacccc cgccccacga acactgcagc
     1021 gtgccctagg aggatggctt tgcccagaag gacaccaccg tggtgcacct gcaggaccca
     1081 gcaggggcgt ggccggcaac agcccccagc ggacagcaag ggccccggac acagaccctt
     1141 tgcccctgtg cttagaccaa ctctatcgta ctaaaatcac tttctgtttt aaccagttag
     1201 acatgcctct tccacagctc catttttgat agttggataa tccaccattt gccaagagca
     1261 tgctgggtct cccgtgactg ctatctcatc tgatgcacca tttagctcca gaaagcaaat
     1321 taaagaaaac tgaagtaacc ctgtttgaaa gagatcatta aatgtatttt gcaaaagcct
     1381 aaagttatat atttaacagt ttttatatgt tgtatatttg tagaaaatcc tatttaacat
     1441 ttgacagcag gtctgaccat cctgagagtt gtgaccaggc cccctggaag cctggagact
     1501 ctggagtggc catggaggac ctcagagcag acacggaggg gcagagctgt gggtgaagtg
     1561 cagaggaacc cacccattct aggaagctct gactctcttt gctctggttt ggtctgatag
     1621 ctcacacccc cctgtgagtc tgtgtgttgg taaacattgc gtatacaata ttttggtcac
     1681 ggattttggt ccctctctct ctcttaaccc cctttgccat ccatagatct tgagtccatg
     1741 tacggccaac ttgcccttcc cagatgaatg gccccccttc attctcagag gtccttgttc
     1801 tccacattgg gaggctgaga cagcagg
//
