LOCUS       NM_001108197            2765 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus TATA-box binding protein associated factor 8
            (Taf8), mRNA.
ACCESSION   NM_001108197 XM_001061330 XM_236948
VERSION     NM_001108197.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2765)
  AUTHORS   Louder RK, He Y, Lopez-Blanco JR, Fang J, Chacon P and Nogales E.
  TITLE     Structure of promoter-bound TFIID and model of human pre-initiation
            complex assembly
  JOURNAL   Nature 531 (7596), 604-609 (2016)
   PUBMED   27007846
  REMARK    Erratum:[Nature. 2016 Aug 4;536(7614):112. PMID: 27096372]
REFERENCE   2  (bases 1 to 2765)
  AUTHORS   Malkowska M, Kokoszynska K, Rychlewski L and Wyrwicz L.
  TITLE     Structural bioinformatics of the general transcription factor TFIID
  JOURNAL   Biochimie 95 (4), 680-691 (2013)
   PUBMED   23146842
  REMARK    Review article
REFERENCE   3  (bases 1 to 2765)
  AUTHORS   Soutoglou E, Demeny MA, Scheer E, Fienga G, Sassone-Corsi P and
            Tora L.
  TITLE     The nuclear import of TAF10 is regulated by one of its three
            histone fold domain-containing interaction partners
  JOURNAL   Mol Cell Biol 25 (10), 4092-4104 (2005)
   PUBMED   15870280
REFERENCE   4  (bases 1 to 2765)
  AUTHORS   Guermah M, Ge K, Chiang CM and Roeder RG.
  TITLE     The TBN protein, which is essential for early embryonic mouse
            development, is an inducible TAFII implicated in adipogenesis
  JOURNAL   Mol Cell 12 (4), 991-1001 (2003)
   PUBMED   14580349
REFERENCE   5  (bases 1 to 2765)
  AUTHORS   Voss AK, Thomas T, Petrou P, Anastassiadis K, Scholer H and Gruss
            P.
  TITLE     Taube nuss is a novel gene essential for the survival of
            pluripotent cells of early mouse embryos
  JOURNAL   Development 127 (24), 5449-5461 (2000)
   PUBMED   11076765
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473987.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001061330.1, XM_236948.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ211123.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132262, SAMD00132263
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2765
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q12"
     gene            1..2765
                     /gene="Taf8"
                     /gene_synonym="Tbn"
                     /note="TATA-box binding protein associated factor 8"
                     /db_xref="GeneID:316216"
                     /db_xref="RGD:1308423"
     exon            1..60
                     /gene="Taf8"
                     /gene_synonym="Tbn"
                     /inference="alignment:Splign:2.1.0"
     CDS             22..948
                     /gene="Taf8"
                     /gene_synonym="Tbn"
                     /note="taube nuss homolog; TAF8 RNA polymerase II, TATA
                     box binding protein (TBP)-associated factorq"
                     /codon_start=1
                     /product="transcription initiation factor TFIID subunit 8"
                     /protein_id="NP_001101667.1"
                     /db_xref="GeneID:316216"
                     /db_xref="RGD:1308423"
                     /translation="MADTATGPGGSGTRPGNKQSTNPADNYHLARRRTLQVVVSSLLT
                     EAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNV
                     DTLPAYAKRSQRMVITAPPVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKT
                     PTYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFT
                     IPYLTALLPSELEIQQMEETDSSEQDEQTDTENIALHISTDESGAEKENTSVLQQNSS
                     LSGSRNGEESTIDNPYLRPVKKPKIRRKKSLS"
     exon            61..217
                     /gene="Taf8"
                     /gene_synonym="Tbn"
                     /inference="alignment:Splign:2.1.0"
     exon            218..316
                     /gene="Taf8"
                     /gene_synonym="Tbn"
                     /inference="alignment:Splign:2.1.0"
     exon            317..379
                     /gene="Taf8"
                     /gene_synonym="Tbn"
                     /inference="alignment:Splign:2.1.0"
     exon            380..504
                     /gene="Taf8"
                     /gene_synonym="Tbn"
                     /inference="alignment:Splign:2.1.0"
     exon            505..652
                     /gene="Taf8"
                     /gene_synonym="Tbn"
                     /inference="alignment:Splign:2.1.0"
     exon            653..795
                     /gene="Taf8"
                     /gene_synonym="Tbn"
                     /inference="alignment:Splign:2.1.0"
     exon            796..935
                     /gene="Taf8"
                     /gene_synonym="Tbn"
                     /inference="alignment:Splign:2.1.0"
     exon            936..2765
                     /gene="Taf8"
                     /gene_synonym="Tbn"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcacattac gcgagagcaa gatggctgac acggccaccg ggcctggtgg ctccggaacg
       61 agaccaggaa ataaacagtc cactaacccg gctgataact accatctggc ccggaggagg
      121 accctgcaag tggttgtgag ctctttgctg acagaggcgg gatttgagag cgcggagaaa
      181 gcatctgtgg agacgttgac agagatgctg cagagctaca tctcagaaat tgggagaagc
      241 gccaagtcat actgcgagca cacagccagg acccagccca cgctgtcgga catcgtggtc
      301 acactggttg aaatggggtt caatgttgac actctgcctg cttatgcaaa acgatctcag
      361 aggatggtca tcactgcacc tccggtgacc aatcagccag tgacacccaa ggccctcact
      421 gcagggcaga accgacctca cccgccacac atccccagcc attttcctga atttccggat
      481 ccacacacgt acataaaaac tccgacgtac cgtgagccag tgtctgacta ccaggtcctc
      541 cgagagaagg ccgcgtctca gaggcgagac gtggagcgag cactcacccg cttcatggcc
      601 aagacaggcg agacccagag tctcttcaag gatgacgtca gcactttccc cttgattgca
      661 gccagacctt tcaccatccc ctacctcacg gccttgctcc cctccgagct ggagatacag
      721 cagatggaag agacagactc ctcggagcag gacgagcaga cagataccga gaacatcgcg
      781 ctccatatca gcacggacga atccggagct gagaaggaga acacttctgt cctgcagcag
      841 aactcctcct tgtccggcag ccggaacggg gaggagagca ccattgataa cccctatctg
      901 cggcccgtga agaagcccaa gatccggagg aagaagtccc tctcgtgacc tgagaaggaa
      961 gccgccctgt aaaggggaga acactccttt cctgggggag tggaaccaca gagggaagag
     1021 gagggggcat ccgtcttctg gccgtgtcca ggccatgcca tttagtagca cctttctctg
     1081 aagacagtct gttgagcttg agtacgtgtg gaggaaatca tggtgcaaca gggccaggac
     1141 tgctggtgac tccattgatc aatcacggga cgtgattcct ttggaactgg agggccatgg
     1201 aagagctaga aagaagccat gtctccgtgg cttgccgaga agatggccaa gtgtatcttc
     1261 cagacctctc agatccctga ccatacaaac ccatcaagtt ctcccttctc acctgggccc
     1321 caaggtcccg gctgagcaga tggaaagtga ctttatagct cacctctgat ctggggctgc
     1381 cagaagctag gagcacagga gtcagtatca atgacagtgg ccacagggca gcacttgatt
     1441 agagctgacc acaaaggtga agcgcccttc tgggaaagct ggtctgacca gaggctggga
     1501 tagagttact tatcctgtga cttaaaaagg agccgtggat ttcaggcacc acgaagagga
     1561 cttagcaggt aggagaggac tgagcttagc tgagaaagcc agctgtggta gaaagctccg
     1621 tgtccacctg cctgtgggag gggctgagag gaccctgctg aggcatcgga atccgccctc
     1681 cgcctcctcc ctggagagaa gacgccaccc tacacttccc cacgaatcat gaatcgggcc
     1741 tccaaggaag gatggtggga cacgtggaaa ttgagataac atggagaagg tgttccttgg
     1801 ttggaatgcc tcctccatcc tggtggctgc tgcttctcct tcagtcttgc tcactctttc
     1861 tctccctgcc cctcatgttt cagagacagg ctctctgtgt cccaggctca gtgtcgtcct
     1921 gcccctgctg caggtccagg tgtgcgcccc atgcttggca tccgtaagct ggcagaggcc
     1981 ccgccttccc tgctggtctc gagggtcttt ggtccccttc ctggagggac agagctctgt
     2041 gtctggaatc gaaggacaag gaatggtgag gaaatgagct ttctcacctc gaggccaaac
     2101 agggattttc actgtgacta agaacttcca ggtcagaaca ggaagactga cctgtgtggc
     2161 tcccgagagc acttgacaac ttggtgccag tcagttggga tctagtcagg gtcagacagg
     2221 aggtgtcgca ccctgctgtt ccggtgcttc tagtgagcac gtctgtaatt ccttcactat
     2281 tctcgtgtcg gggggccaat gcctgttgag aatattgggg gaggaggggg gttcttatct
     2341 gaggcctcag aactgcgtgc tgtctttctt cctctaggaa gagagatgct gggacgtggg
     2401 cctgagtggt gatgtgctga agcatataac tctcattgtg tgtacattta tagatttcta
     2461 ttttttataa ttgggggtct tattggaagg aaaaatacag tgtgaaaggc ctgtaataaa
     2521 aatcagaata aaaactttgt aggtgaatca gacataaggc ctatcgagcg gtaggcaaaa
     2581 gagcactgta cacagctttt cctgtgactt tatttcctgt gtttctgcat gctgaggggt
     2641 ggtaacacac acctgtgttt gggatactga gctcaggtca acctgcacta catagcaggc
     2701 cccagcctca aaaccagaac aagttgttgg tgcttatttg tttgttttta agacttttaa
     2761 aattt
//
