LOCUS       NM_001025734            2000 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus transcriptional adaptor 3 (Tada3), mRNA.
ACCESSION   NM_001025734 XM_575640
VERSION     NM_001025734.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Spedale,G., Timmers,H.T. and Pijnappel,W.W.
  TITLE     ATAC-king the complexity of SAGA during evolution
  JOURNAL   Genes Dev 26 (6), 527-541 (2012)
   PUBMED   22426530
  REMARK    Review article
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Li,C.W., Ai,N., Dinh,G.K., Welsh,W.J. and Chen,J.D.
  TITLE     Human ADA3 regulates RARalpha transcriptional activity through
            direct contact between LxxLL motifs and the receptor coactivator
            pocket
  JOURNAL   Nucleic Acids Res 38 (16), 5291-5303 (2010)
   PUBMED   20413580
REFERENCE   3  (bases 1 to 2000)
  AUTHORS   Orpinell,M., Fournier,M., Riss,A., Nagy,Z., Krebs,A.R., Frontini,M.
            and Tora,L.
  TITLE     The ATAC acetyl transferase complex controls mitotic progression by
            targeting non-histone substrates
  JOURNAL   EMBO J 29 (14), 2381-2394 (2010)
   PUBMED   20562830
REFERENCE   4  (bases 1 to 2000)
  AUTHORS   Krebs,A.R., Demmers,J., Karmodiya,K., Chang,N.C., Chang,A.C. and
            Tora,L.
  TITLE     ATAC and Mediator coactivators form a stable complex and regulate a
            set of non-coding RNA genes
  JOURNAL   EMBO Rep 11 (7), 541-547 (2010)
   PUBMED   20508642
REFERENCE   5  (bases 1 to 2000)
  AUTHORS   Guelman,S., Kozuka,K., Mao,Y., Pham,V., Solloway,M.J., Wang,J.,
            Wu,J., Lill,J.R. and Zha,J.
  TITLE     The double-histone-acetyltransferase complex ATAC is essential for
            mammalian development
  JOURNAL   Mol Cell Biol 29 (5), 1176-1188 (2009)
   PUBMED   19103755
REFERENCE   6  (bases 1 to 2000)
  AUTHORS   Wang,Y.L., Faiola,F., Xu,M., Pan,S. and Martinez,E.
  TITLE     Human ATAC Is a GCN5/PCAF-containing acetylase complex with a novel
            NC2-like histone fold module that interacts with the TATA-binding
            protein
  JOURNAL   J Biol Chem 283 (49), 33808-33815 (2008)
   PUBMED   18838386
REFERENCE   7  (bases 1 to 2000)
  AUTHORS   Kurabe,N., Katagiri,K., Komiya,Y., Ito,R., Sugiyama,A., Kawasaki,Y.
            and Tashiro,F.
  TITLE     Deregulated expression of a novel component of TFTC/STAGA histone
            acetyltransferase complexes, rat SGF29, in hepatocellular
            carcinoma: possible implication for the oncogenic potential of
            c-Myc
  JOURNAL   Oncogene 26 (38), 5626-5634 (2007)
   PUBMED   17334388
REFERENCE   8  (bases 1 to 2000)
  AUTHORS   Benecke,A., Gaudon,C., Garnier,J.M., vom Baur,E., Chambon,P. and
            Losson,R.
  TITLE     ADA3-containing complexes associate with estrogen receptor alpha
  JOURNAL   Nucleic Acids Res 30 (11), 2508-2514 (2002)
   PUBMED   12034840
REFERENCE   9  (bases 1 to 2000)
  AUTHORS   Martinez,E., Palhan,V.B., Tjernberg,A., Lymar,E.S., Gamper,A.M.,
            Kundu,T.K., Chait,B.T. and Roeder,R.G.
  TITLE     Human STAGA complex is a chromatin-acetylating transcription
            coactivator that interacts with pre-mRNA splicing and DNA
            damage-binding factors in vivo
  JOURNAL   Mol Cell Biol 21 (20), 6782-6795 (2001)
   PUBMED   11564863
REFERENCE   10 (bases 1 to 2000)
  AUTHORS   Brand,M., Yamamoto,K., Staub,A. and Tora,L.
  TITLE     Identification of TATA-binding protein-free TAFII-containing
            complex subunits suggests a role in nucleosome acetylation and
            signal transduction
  JOURNAL   J Biol Chem 274 (26), 18285-18289 (1999)
   PUBMED   10373431
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097414.1.
            
            On Jul 22, 2005 this sequence version replaced XM_575640.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097414.1, SRR8487227.54958.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..2000
                     /gene="Tada3"
                     /gene_synonym="Tada3l"
                     /note="transcriptional adaptor 3"
                     /db_xref="GeneID:362414"
                     /db_xref="RGD:1564009"
     exon            1..288
                     /gene="Tada3"
                     /gene_synonym="Tada3l"
                     /inference="alignment:Splign:2.1.0"
     exon            289..513
                     /gene="Tada3"
                     /gene_synonym="Tada3l"
                     /inference="alignment:Splign:2.1.0"
     CDS             307..1605
                     /gene="Tada3"
                     /gene_synonym="Tada3l"
                     /note="ADA3 homolog; ADA3-like protein"
                     /codon_start=1
                     /product="transcriptional adapter 3"
                     /protein_id="NP_001020905.1"
                     /db_xref="GeneID:362414"
                     /db_xref="RGD:1564009"
                     /translation="MSELKDCPLQFHDFKSVDHMKVCPRYTAVLARSEDDGIGIEELD
                     TLQLELETLLSSASRRLRVLEAETQILTDWQDKKGDRRILKLARDHELGAPPKHGKPK
                     KQKLEGKTGHGPGPGPGRPKSKNVQPKIQEYEFTDDPIDVPRIPKNDAPNRFWASVEP
                     YCADITSEEVRTLEELLKPPEDEAEHYKIPPLGKHYSQRWAQEDLLEEQKDGARAAAV
                     ADKKKGLIGPLTELDTKDVDALLKKSEAQHEQPEDGCPFGALTQRLLQALVEENIISP
                     MEDSPIPDMSGKESGADGASTSPRNQNKPFSVPHTKSLESRIKEELIAQGLLESEDRP
                     AEDSEDEVLAELRKRQAELKALSAHNRTKKHDLLRLAKEEVSRQELRQRVRMADNEVM
                     DAFRKIMAARQKKRTPTKKEKDQAWKTLKERESILKLLDG"
     exon            514..764
                     /gene="Tada3"
                     /gene_synonym="Tada3l"
                     /inference="alignment:Splign:2.1.0"
     exon            765..870
                     /gene="Tada3"
                     /gene_synonym="Tada3l"
                     /inference="alignment:Splign:2.1.0"
     exon            871..1012
                     /gene="Tada3"
                     /gene_synonym="Tada3l"
                     /inference="alignment:Splign:2.1.0"
     exon            1013..1116
                     /gene="Tada3"
                     /gene_synonym="Tada3l"
                     /inference="alignment:Splign:2.1.0"
     exon            1117..1226
                     /gene="Tada3"
                     /gene_synonym="Tada3l"
                     /inference="alignment:Splign:2.1.0"
     exon            1227..1412
                     /gene="Tada3"
                     /gene_synonym="Tada3l"
                     /inference="alignment:Splign:2.1.0"
     exon            1413..1949
                     /gene="Tada3"
                     /gene_synonym="Tada3l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcgtcaact gcagggggcc cgcccatagc cagttccgga gcagttgctc cgatcgccct
       61 ggactccccg ccccctcctg cggcccgggg cctgtaggag gccgcagaga ggaggtagga
      121 gaggcggggg ttgtgttagg ggctccctag aggacaagga ccctggaggc gggatcttgg
      181 ggcgacacac aggtggagcc agccattaag cagtcccact tctgtgccag gcactgagct
      241 gggcacttga cgagcatcac ttcttaatcc tcagaacatt ccagggaggg tcccatctcc
      301 tgggccatga gtgaactgaa ggactgccca ttgcagtttc atgacttcaa atctgtggac
      361 cacatgaagg tctgtccccg gtacacagca gtgctggccc gctccgagga cgatggcatt
      421 ggcatcgagg agctggacac cctgcagctg gagcttgaga ccctgctgtc ctctgcaagc
      481 aggcgactgc gtgtactgga agctgaaacg cagatcctta ctgactggca ggataagaaa
      541 ggtgacaggc gaattctgaa gcttgctcga gaccatgagc ttggtgcccc tccaaaacat
      601 gggaagccca agaagcagaa actggaaggg aagacaggac atgggccagg ccctggccca
      661 ggacgaccca aatccaaaaa tgttcaaccc aagatccaag aatatgaatt tactgatgac
      721 ccaatcgatg tgcctcggat ccccaagaac gatgctccca acaggttctg ggcctctgtg
      781 gagccctatt gtgctgacat caccagtgag gaggtacgaa cactagagga gctcctgaag
      841 ccccctgaag atgaagctga acattataag attcccccac tagggaaaca ctactcccaa
      901 cgctgggccc aggaggatct gctagaggag cagaaggatg gggctcgagc agcagctgtg
      961 gctgacaaga agaaaggcct cataggaccg ctgacagaac tggacacaaa agatgtggat
     1021 gccctgctga agaagtctga ggcccagcat gaacagccag aagacgggtg tccctttggt
     1081 gccctgacac agcgcctgct gcaggcccta gtggaggaaa atattatttc ccctatggag
     1141 gactctccga tacctgacat gtctgggaaa gaatcagggg ctgatggagc aagcacctcc
     1201 ccccgcaatc agaacaaacc tttcagtgtg ccacatacca agtccttgga gagccgcatc
     1261 aaggaggagc tgattgccca gggcctactg gagtccgagg accggcctgc tgaggactca
     1321 gaggatgagg tcctcgctga gctgcgcaaa cggcaggctg agctgaaggc gctcagtgca
     1381 cacaaccgca ccaagaagca tgacctgctg aggttggcaa aggaggaggt gagccggcag
     1441 gagctgagac agcgggtccg catggcagac aatgaggtca tggatgcctt ccgcaagatc
     1501 atggctgcac ggcagaagaa gcgtaccccc acaaagaagg aaaaggacca ggcctggaag
     1561 accctgaagg agcgggagag catcctgaag ctcctagacg ggtagcctta cctgctgctg
     1621 gccatctccc tggcctggca gaagtctact tcctctgaag ccttgaccag aggctgccta
     1681 tcaaatgaca acagtctcag ggctgaaaca ctctcaggcc actcagccga gctttgtgca
     1741 gccagtgtgc aaggccttac tgcgcttgcc tggacctagc atctgcctga tgccccagat
     1801 gagcaggctt gttcctcgtc ccctttccct cataccatct ccacacctct ccctcaagga
     1861 cttcttcctt gaggttttgt aaagtacaaa cttaagaata aagtgattgc tgtgttttgg
     1921 tttttttaaa gaaaagttat aaaaaaccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1981 aaaaaaaaaa aaaaaaaaaa
//
