LOCUS       NM_001012141            2124 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus transcriptional adaptor 2A (Tada2a), mRNA.
ACCESSION   NM_001012141 XM_340862
VERSION     NM_001012141.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Spedale,G., Timmers,H.T. and Pijnappel,W.W.
  TITLE     ATAC-king the complexity of SAGA during evolution
  JOURNAL   Genes Dev 26 (6), 527-541 (2012)
   PUBMED   22426530
  REMARK    Review article
REFERENCE   2  (bases 1 to 2124)
  AUTHORS   Orpinell,M., Fournier,M., Riss,A., Nagy,Z., Krebs,A.R., Frontini,M.
            and Tora,L.
  TITLE     The ATAC acetyl transferase complex controls mitotic progression by
            targeting non-histone substrates
  JOURNAL   EMBO J 29 (14), 2381-2394 (2010)
   PUBMED   20562830
REFERENCE   3  (bases 1 to 2124)
  AUTHORS   Krebs,A.R., Demmers,J., Karmodiya,K., Chang,N.C., Chang,A.C. and
            Tora,L.
  TITLE     ATAC and Mediator coactivators form a stable complex and regulate a
            set of non-coding RNA genes
  JOURNAL   EMBO Rep 11 (7), 541-547 (2010)
   PUBMED   20508642
REFERENCE   4  (bases 1 to 2124)
  AUTHORS   Saad,Y., Garrett,M.R., Manickavasagam,E., Yerga-Woolwine,S.,
            Farms,P., Radecki,T. and Joe,B.
  TITLE     Fine-mapping and comprehensive transcript analysis reveals
            nonsynonymous variants within a novel 1.17 Mb blood pressure QTL
            region on rat chromosome 10
  JOURNAL   Genomics 89 (3), 343-353 (2007)
   PUBMED   17218081
REFERENCE   5  (bases 1 to 2124)
  AUTHORS   Ogryzko,V.V., Kotani,T., Zhang,X., Schiltz,R.L., Howard,T.,
            Yang,X.J., Howard,B.H., Qin,J. and Nakatani,Y.
  TITLE     Histone-like TAFs within the PCAF histone acetylase complex
  JOURNAL   Cell 94 (1), 35-44 (1998)
   PUBMED   9674425
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079084.1.
            
            On Feb 11, 2005 this sequence version replaced XM_340862.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079084.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q26"
     gene            1..2124
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /note="transcriptional adaptor 2A"
                     /db_xref="GeneID:360581"
                     /db_xref="RGD:1309959"
     exon            1..72
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            73..186
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     CDS             162..1493
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /note="ADA2-like protein"
                     /codon_start=1
                     /product="transcriptional adapter 2-alpha"
                     /protein_id="NP_001012141.1"
                     /db_xref="GeneID:360581"
                     /db_xref="RGD:1309959"
                     /translation="MDRLGSFSNDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQ
                     CFTRGFEYKKHQSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQM
                     CTKTKEECEKHYMKHFINNPLFASTLLNLKQAEAAKTADTAIPFHSADDPPRPAFDSL
                     LSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKER
                     QRRKKIIRDHGLVNLRKFRLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALE
                     FELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQ
                     QWLRRQADIDSGLSPSVLMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQVVRLVPG
                     AYLEYKSALLNECHKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKA"
     exon            187..293
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            294..353
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            354..445
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            446..603
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            604..692
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            693..765
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            766..829
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            830..873
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            874..984
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            985..1056
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1057..1189
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1190..1233
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1234..1307
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
     exon            1308..2101
                     /gene="Tada2a"
                     /gene_synonym="Tada2l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcgcacgca gagagtctgc acagcgcacg cagcggcggg ctcttcggtg ccgaggtgcg
       61 ggacgtggcg aggggaccgt gggattgtta atctttggca acttctgaag tctcaaagct
      121 ctgtatcaag gaagatcaca cagcagtctg tcagctagag gatggaccgt ttgggttcct
      181 ttagcaatga tccatctgat aagccacctt gcagaggctg ctcctcctac ctcatggaac
      241 cttacattaa atgtgctgaa tgtgggcctc ctcctttctt cctgtgcttg cagtgtttca
      301 ctagaggatt tgagtacaag aaacatcaga gtgatcatac ttacgaaata atgacctcag
      361 acttccctgt tcttgatccc agctggacag ctcaggaaga aatggcactt ttagaagctg
      421 ttatggactg tggctttgga aattggcagg atgttgctaa tcagatgtgc accaaaacca
      481 aggaagagtg tgagaagcac tacatgaaac attttatcaa taaccctctg tttgcatcca
      541 ccctgctaaa cctgaagcaa gctgaggcag ccaaaactgc cgacacagcc attccatttc
      601 actctgcaga tgaccctccc cggcctgcct ttgattcgtt gctgtctcgg gacatggcag
      661 gatatatgcc agctcgggca gatttcattg aggagtttga caattatgca gaatgggact
      721 taagagacat tgattttgtt gaagacgact cggacatctt acacgctctg aagatggctg
      781 tggtggatat ctatcattcc aggttaaaag agaggcaaag acgaaaaaag attataagag
      841 atcacggatt agttaacctt agaaagttcc gactgatgga gcgtcggtat cctaaggagg
      901 tccaagacct ttatgaaacg atgaggagat ttgcaaggat tgtgggacca gtggagcacg
      961 acaagttcat tgaaagccat gcattggaat ttgaactccg aagggaaatc aagaggctcc
     1021 aagaatatag gacagcaggc attaccaatt tttgtagcgc caggacttat gaccacctga
     1081 agaagacacg agaggaggag cgccttaaac gcaccatgct ctcagaagtt ctccagtaca
     1141 tccaggacag cagtgcgtgc cagcagtggc tgcgccggca ggctgacatt gattctgggc
     1201 tgagtccttc tgttctgatg gcttccaact caggaagacg cagtgcacca cccttgaacc
     1261 tcacgggtct ccctggaaca gagaaactca atgaaaaaga aaaggagctc tgtcaggtgg
     1321 taaggttggt acctggagcc tatttggaat ataagtctgc tctattgaat gagtgtcaca
     1381 agcaaggagg cttgagactg gcacaagcaa gagcactcat caagatagac gtgaacaaaa
     1441 cccggaagat ctatgacttc ctcatccgag aagggtacat cacgaaagcc tgagtctctg
     1501 cttggcagtg caagccagaa cagtgaacgt ggccagtcaa agggcagtgt ccatattccg
     1561 gagactcctg cttgagttgg attcttactg tgagaagaaa cctcttctcg gccctctgtc
     1621 aagtgctcct tttgggagaa tagtgctgca gcctgtgtgc tctcaacacc atgggcgttc
     1681 attccgacca cctcttgtca gtcagacaag agccatagga cctcaggtca tggctttggt
     1741 gggcatagag ggaaaccgag ccacagcatt tcatcccaga aggccagcta ggatccacgt
     1801 actagagagt aaaggtcact cactctgcct tcccatcttg tgggcagatt ttaaatgaag
     1861 gttttagagt gcaggaaagc caaggatttt tctttttttt atcctgacat cttagtttac
     1921 gagatgaaga ggtggaactt tcccccatgg tggtctgtct ggaacttgat tttaactgta
     1981 atgtctggct ttgtactttg cagtctggct gtctgatgtg cagtcgactg gaggaggtgg
     2041 caccggatat aaaatgtctg ttatttttag aattaatgga ttaaagtgtt ttgctatgta
     2101 aaaaaaaaaa aaaaaaaaaa aaaa
//
