LOCUS       NM_001037980            1455 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus transcriptional adaptor 1 (Tada1), mRNA.
ACCESSION   NM_001037980 XM_341150
VERSION     NM_001037980.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1455)
  AUTHORS   Spedale,G., Timmers,H.T. and Pijnappel,W.W.
  TITLE     ATAC-king the complexity of SAGA during evolution
  JOURNAL   Genes Dev 26 (6), 527-541 (2012)
   PUBMED   22426530
  REMARK    Review article
REFERENCE   2  (bases 1 to 1455)
  AUTHORS   Kurabe,N., Katagiri,K., Komiya,Y., Ito,R., Sugiyama,A., Kawasaki,Y.
            and Tashiro,F.
  TITLE     Deregulated expression of a novel component of TFTC/STAGA histone
            acetyltransferase complexes, rat SGF29, in hepatocellular
            carcinoma: possible implication for the oncogenic potential of
            c-Myc
  JOURNAL   Oncogene 26 (38), 5626-5634 (2007)
   PUBMED   17334388
REFERENCE   3  (bases 1 to 1455)
  AUTHORS   Martinez,E., Palhan,V.B., Tjernberg,A., Lymar,E.S., Gamper,A.M.,
            Kundu,T.K., Chait,B.T. and Roeder,R.G.
  TITLE     Human STAGA complex is a chromatin-acetylating transcription
            coactivator that interacts with pre-mRNA splicing and DNA
            damage-binding factors in vivo
  JOURNAL   Mol Cell Biol 21 (20), 6782-6795 (2001)
   PUBMED   11564863
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC158713.1.
            
            On May 30, 2008 this sequence version replaced NM_001037980.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158713.1, SRR8487231.43484.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q23"
     gene            1..1455
                     /gene="Tada1"
                     /gene_synonym="RGD1306774; Tada1l"
                     /note="transcriptional adaptor 1"
                     /db_xref="GeneID:360874"
                     /db_xref="RGD:1306774"
     exon            1..176
                     /gene="Tada1"
                     /gene_synonym="RGD1306774; Tada1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             103..1110
                     /gene="Tada1"
                     /gene_synonym="RGD1306774; Tada1l"
                     /note="transcriptional adaptor 1- like; transcriptional
                     adapter 1-like protein; transcriptional adaptor 1 (HFI1
                     homolog, yeast) like"
                     /codon_start=1
                     /product="transcriptional adapter 1"
                     /protein_id="NP_001033069.2"
                     /db_xref="GeneID:360874"
                     /db_xref="RGD:1306774"
                     /translation="MATFVSELEAAKKNLSEALGDNVKQYWANLKLWFKQKISKEEFD
                     LEAHRLLTQDNVHSHNDFLLAILTRCQILVSTPEGAGSLPWTGGSAAKPGKPKGKKKL
                     SSVRQKFDHRFQPQNPLSGAQQFVAKDPQDDDDLKLCSHTMMLPTRGQLEGRMIVTAY
                     EHGLDNVTEEAVSAVVYAVENHLKDILTSVVSRRKAYRVRDGHFKYAFGSNVTPQPYL
                     KNSVVAYNNLVEGPPAFPAPCASQNPASHPHTDDAEQQAAFLLACSGDTLPASLPPVN
                     MYDLFEALQVHREVIPTHTVYALNIERIIMKLWHPNHEELQQDKVHRQRLAAKEGLLL
                     C"
     exon            177..268
                     /gene="Tada1"
                     /gene_synonym="RGD1306774; Tada1l"
                     /inference="alignment:Splign:2.1.0"
     exon            269..334
                     /gene="Tada1"
                     /gene_synonym="RGD1306774; Tada1l"
                     /inference="alignment:Splign:2.1.0"
     exon            335..432
                     /gene="Tada1"
                     /gene_synonym="RGD1306774; Tada1l"
                     /inference="alignment:Splign:2.1.0"
     exon            433..642
                     /gene="Tada1"
                     /gene_synonym="RGD1306774; Tada1l"
                     /inference="alignment:Splign:2.1.0"
     exon            643..794
                     /gene="Tada1"
                     /gene_synonym="RGD1306774; Tada1l"
                     /inference="alignment:Splign:2.1.0"
     exon            795..957
                     /gene="Tada1"
                     /gene_synonym="RGD1306774; Tada1l"
                     /inference="alignment:Splign:2.1.0"
     exon            958..1426
                     /gene="Tada1"
                     /gene_synonym="RGD1306774; Tada1l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agccttcaga gtctggggcg caggccttcc gccgagttga tctttcggtt gctggtgacc
       61 gtgggccgcg cggtctacgg tcgggctgag acgcgcgctg caatggcgac ctttgtgagc
      121 gagctggagg ctgccaagaa gaacttgagc gaggcgctgg gggacaacgt gaaacaatac
      181 tgggccaact tgaagttgtg gttcaagcag aagatcagca aagaggagtt cgaccttgaa
      241 gctcacagac tcctcaccca ggacaatgtc cattctcaca atgatttcct cctggccatc
      301 ctcacacgct gtcagatttt ggtttctaca ccagagggtg ctggatcttt gccctggaca
      361 gggggctctg cagccaagcc cggaaaacct aagggcaaga aaaagctttc ttctgttcgt
      421 caaaaatttg atcatagatt tcagccccag aaccccctct ctggagctca acagtttgtg
      481 gcaaaggatc cccaggatga tgatgatttg aaactttgtt cacacaccat gatgcttcct
      541 acacgaggtc aacttgaagg gagaatgatc gtgactgcct atgagcacgg gctggacaac
      601 gtcaccgagg aggccgtgtc tgctgttgtc tatgcggtgg agaatcacct caaagatatt
      661 ctgacttcag ttgtgtcgag aaggaaagct tacagggttc gggatggtca ttttaaatat
      721 gcctttggta gtaacgtgac cccacagcca tacctgaaga acagtgtggt ggcttacaac
      781 aacttggttg aaggccctcc ggcctttcct gctccttgtg ccagtcagaa cccagcttct
      841 cacccacaca ccgatgacgc tgaacagcag gctgcattcc tgttggcttg ctctggggac
      901 actctacctg catcgttgcc tccagtgaac atgtatgatc tgtttgaagc tttgcaggtg
      961 cacagggaag tcattcctac acatactgtg tatgccctta acattgaaag gatcatcatg
     1021 aaactctggc accccaatca tgaagagcta cagcaagaca aagtccaccg ccagcgcttg
     1081 gcagccaaag aaggactttt gctctgctaa attaggattt gaagatttgg gaccatcata
     1141 aattaattgg ttgctgaaca ttgaatgctt ttgagtccac atttcaaaat tgaagtgtat
     1201 agtgtatgta taacctttcc tatggaaatg tgacatttga gtgcattttg tgttgctact
     1261 gtgaagccat tactatgtct gatgaccagt gtatctgtcc ccagcatatg gagcagtcat
     1321 tgttctgtgt ctgataggga tattaagaca cctggggtgt ctctggtctg tcagtcagat
     1381 cagtgatgtt gtagaataaa gatgctgttg tagttcagtc ccatgaaaaa aaaaaaaaaa
     1441 aaaaaaaaaa aaaaa
//
