LOCUS       XM_006251330            3538 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transforming, acidic coiled-coil
            containing protein 3 (Tacc3), transcript variant X2, mRNA.
ACCESSION   XM_006251330
VERSION     XM_006251330.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006251330.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006251330.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3538
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3538
                     /gene="Tacc3"
                     /note="transforming, acidic coiled-coil containing protein
                     3; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 ESTs, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 66 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:360962"
                     /db_xref="RGD:1302948"
     CDS             327..2180
                     /gene="Tacc3"
                     /codon_start=1
                     /product="transforming acidic coiled-coil-containing
                     protein 3 isoform X2"
                     /protein_id="XP_006251392.2"
                     /db_xref="GeneID:360962"
                     /db_xref="RGD:1302948"
                     /translation="MNLHILTDENVPNEKSSESRDFLFSAPELTGRSSVLRLSQKENV
                     PPKNQAKAAKVTFQTPLRDPQTHRILSPNMTSKLEAPFALDDSVGLQNDHCVFLQKEN
                     TKVSSPRRLAERPGLQPLLKKSETSQEQCPKETEERDGTRERNECPQPTPWGSYHLNW
                     EKLDDPNFNPFGSDSKYNGQKAKLPESPKNRLSLPVAEQLSAGPTDVESSPSHQLPVA
                     PVDDVPVVQMAAEILKAEDELQEGILNSLSPSAFTSFPDGELVTPPIEPMPEPSPQGP
                     EPLLDSEPVTPPVKPVLEPTPQGPEPLLDSEPVTPPVKPVLEPTPQGSEPLLDSEPVT
                     LPVEPVPESSHQGPEPLLDSEPVTLPVEPVPESSHQGPEPLLDPKEESFRDPAEVLGA
                     GAEVDYLEQFGTSSFKESAWRKQSLYLKFDPLLKESPLRSMPVPVAPVTNSTQDTEES
                     GSGNPTEAKLVDLDFLGGLDVPVSAPPLCVLEPRGLLPAEPIVDVLKYSQKDLDAVVN
                     VMQQENLELRNKYEDLNTKYLEMGKIVDGFEKIVYKSMEEAEKQKELAEDKIQKILRE
                     RDQLTADLNSMEKSFSDLFKRFEKQKEVIEGYQKGRDSLSISRTSCTTRLW"
ORIGIN      
        1 ccacgctccc actgtgccct caatcccgga agcggaactg cctgcgcatg aagggcggga
       61 ctggtatggc ctgctattgg ctgccgccag ctatacagag gcctcttctg cagcgcgctg
      121 attggctgca gaacgtcaac tctcggtatt tgaatctggg gcgggcgtag cggacgacgt
      181 tcacggaccg agagagcaga gcttgttcgg attcctttgg ctcggtttct ctagctcgtt
      241 tttctgttgc ggagcaaata cggctctcct cccttgcggt tggcgtccgc gcgggcccag
      301 ggctccgcag ccgtaggcag gaaaggatga atctgcatat cttaactgac gaaaatgtcc
      361 ccaacgagaa gagttcagaa agccgtgact tcctgttttc agcaccagaa cttaccggaa
      421 gatcctctgt tcttcgcctg tcacagaaag aaaatgtacc tcccaagaac caggctaaag
      481 ccgcaaaggt gacttttcag acacctcttc gggatccaca gacacacagg atcttaagtc
      541 ctaatatgac cagcaaactt gaggctcctt ttgctctgga tgacagtgtt ggattacaaa
      601 atgaccactg tgtcttctta cagaaagaga acacaaaggt atcttcacca aggagactgg
      661 cagagagacc tggcctccag cctctcctga agaaatcaga gaccagccag gagcagtgcc
      721 ccaaagaaac agaagaaaga gatgggacca gagagagaaa tgaatgtccc cagcctacac
      781 cctggggctc ttatcacctt aactgggaga agttggatga cccaaacttc aacccatttg
      841 gaagtgactc caagtataat ggccaaaagg ctaagctccc tgaaagtccc aagaacaggt
      901 tgtccttgcc tgtggctgag cagctgagtg ctgggcctac agacgtggag tcttctccaa
      961 gccaccagct gccggtagcc ccagtggacg atgtacctgt ggttcagatg gcagccgaga
     1021 tcctgaaagc agaggacgag ttacaggagg gaattttgaa ttccttgagc ccttcagctt
     1081 tcacaagttt tccagacggt gagctggtaa cccctccaat cgagccgatg ccggagcctt
     1141 cccctcaggg gccagagcct ctcttggaca gcgagccagt gacccctcca gtcaagccag
     1201 tgctggaacc tactcctcag gggccagagc ctctcttgga cagtgagccg gtgacccctc
     1261 cagtcaagcc agtactggaa cctacccctc agggatcaga gcctctcttg gacagtgagc
     1321 cagtgaccct tcctgttgaa ccagtgccag agtcttccca tcagggacca gaacctctct
     1381 tggacagtga gccagtgacc cttcctgttg aaccagtgcc agagtcttcc catcagggac
     1441 cagaacctct cttggaccca aaggaagaga gctttagaga cccagcagaa gttctaggtg
     1501 ctggtgctga agtggattat ctggagcaat ttggaacttc ctcgttcaag gagtcagcct
     1561 ggaggaagca gtctttgtac ttgaaatttg acccccttct gaaagagagc cctttgcggt
     1621 caatgccagt gccagtggcc ccagtgacaa atagtacaca ggatacagag gagtctggct
     1681 ccggaaatcc aacagaagcc aagctcgtcg acttagattt cttgggaggt ctggatgttc
     1741 ctgtgtcggc cccacccctg tgtgtccttg agcctcgagg tctccttcct gccgagccta
     1801 ttgtggacgt gctgaaatac agtcagaaag acctggatgc agtggtgaac gtgatgcagc
     1861 aggagaactt ggagctgaga aacaaatatg aggacctcaa cacgaagtat ctggagatgg
     1921 ggaagatcgt tgatggattt gagaagatcg tgtataaatc aatggaggag gctgagaaac
     1981 agaaggaact agctgaagac aaaattcaaa agattttaag agagagagac caacttactg
     2041 cggatctgaa ctctatggag aagtccttct ctgacctctt caagcggttt gagaagcaga
     2101 aggaagtgat tgaaggctac cagaagggac gtgatagcct atctatcagc aggacaagct
     2161 gcaccacgag actctggtag gagagcacgg ccgatctgtg agatgtggtt ttagaggctt
     2221 taggagcctc agcagaagag actgagggtt tccctgctta gtgctactat gtctggcatg
     2281 cacaaggccc ttagctcact ctccattaac ttttcaaccc tcctgtcctc ccaaaagaaa
     2341 aaaagagggg aaaaaaaaac tttgcagtta tagagttctg tgaacagaca ccatgaccaa
     2401 ggcaactctt acaaaggaaa acatttaatt gaggctgggt tataggttca gaggttcagt
     2461 ccaggatcaa ggcagtgtct aggcagtcat gcttctggag gagacaagag ttctacatct
     2521 tgattggaag gaagccagga gaagactatc ttctacatgg ctaggaagag ggtctctaag
     2581 cccaccccca cagtgacaca cttgctccaa ctaggtcaca cctaatagtg ctattccctg
     2641 aaccaagcat attcaagtca ccacacagag attggtattt ttgggcaatg gagtttgggg
     2701 aacagctaac agtgggctca ggaatatctt gcaagaaagg ggaaactaga cttccccatg
     2761 gggtcaagtg gaaaaaacaa gtcatgtcag aaaccagctg cggagctctc gtatctcctg
     2821 ctacatggcc ctcagtagtg gttatgagag gcccagagtg tgctgagagg agcaaggctg
     2881 catatattat attcctcagg actgtgctac ccccagtcac aatctgtagg aatcctagtc
     2941 atggtttgca ctcgagtaag aactgatgcc tggtactaag gtctgggggt taggctcagt
     3001 tcccagaggt gacagtccag aagctctctt taccttgaag gtgggataga ctgttttggt
     3061 ttttcaagac cgggtttttt ttgtgtaaga gccctggctg ttgtagagct cacttcatag
     3121 accagactgg cctcaaactc ataggtctgc ctgcctctgc atctcaagta ctaggatcaa
     3181 aggtatgtac agccacaccc agctcaaggg gtgctttttt aaaatttaca ttccaaatgt
     3241 tgcctccctt cccagtctcc cctcccctag ctcttcacac acaccctttg tttctgagag
     3301 ggtgatcagc cacccactca cccccaccag catctctctt ccctggggca tcttctccca
     3361 ttgagaccag acaaggcttt ttctaaagag aaaatgtcaa gttgtgtatc actaatgtcc
     3421 cccaaaacct taaatgtcta cagtctgcac ttgaccctgg gagtcccata tgccaagcct
     3481 ggacataacc ccagccttgg tggaacaatg tacttttaag gtttcctatt tgttcact
//
