LOCUS       NM_178333               2262 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus synaptotagmin-like 5 (Sytl5), mRNA.
ACCESSION   NM_178333
VERSION     NM_178333.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Fukuda,M.
  TITLE     Slp4-a/granuphilin-a inhibits dense-core vesicle exocytosis through
            interaction with the GDP-bound form of Rab27A in PC12 cells
  JOURNAL   J Biol Chem 278 (17), 15390-15396 (2003)
   PUBMED   12590134
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Kuroda,T.S., Fukuda,M., Ariga,H. and Mikoshiba,K.
  TITLE     Synaptotagmin-like protein 5: a novel Rab27A effector with
            C-terminal tandem C2 domains
  JOURNAL   Biochem Biophys Res Commun 293 (3), 899-906 (2002)
   PUBMED   12051743
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AB098162.1.
            
            [WARNING] On Oct 17, 2024 this sequence was replaced by
            NM_178333.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB098162.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132269,
                                           SAMD00132273 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq12"
     gene            1..2262
                     /gene="Sytl5"
                     /note="synaptotagmin-like 5"
                     /db_xref="GeneID:302538"
                     /db_xref="RGD:631342"
     CDS             1..2262
                     /gene="Sytl5"
                     /note="synaptotagmin 15"
                     /codon_start=1
                     /product="synaptotagmin-like protein 5"
                     /protein_id="NP_848016.1"
                     /db_xref="GeneID:302538"
                     /db_xref="RGD:631342"
                     /translation="MSKNSEFINLSFLLDHEKEMILGVLKRDEYLKKVEDKRIRKLKN
                     ELLEAKRRSGKTHQEANRVCVHCQKSLGLIFDRGAPCQACSLRVCSECRVTGLDGSWK
                     CTVCAKVAQLRIISGEWFLEEKAKRFKQVNVLGTDVVRQSILRRSPGSEEIQNQEQAH
                     QGADKSDTLSSVRQKATHDGPKRKGFLLSKFRSATRGEIKTPKAESGRSYSLDLDNQN
                     LQSFKSVSGSDRGSTTSSDLTDQEAGRGAPKGSCSNGGIPVTQRSPAPSARSVTSISS
                     REHGFENSMALATIESISEELTKSHRRNTSGTPSIAVSGTSLSSERSRSELDLSESFA
                     EDLEDTSSIRSRSVPGALDKDLNSLEDTEDGVDLVSSRFSANTHSLASGLSTSSQAGS
                     DRKRSYLHVPDADSDTTSLNSMMSVYSETGDYGNVKVTGEILLHISYCYKTGGLYIFV
                     KNCRNLAIGDEKKQRTDAYVKSYLLPDKTRNNKRKTKIRTGTNPEFNETLKYTISHTQ
                     LETRTLQLSVWHYDRFGRNSFLGEVEIAFDSWNFENPCDEWFVLQPKVELAPDISLQY
                     KGELTIVLRYIPPEENLIFPVEQPQGKKIFKKGKKKESPAISGGILEVFIKEAKNLTA
                     VKAGGTSDSFVKGYLLPDDNKATKHKTAVVKKSVNPQWNHVFIFSGLYPQDIQNACLE
                     LTIWDKEAFSSNIFLGGVRLNSGSGISHGKAVDWMDSRGEEQRLWQKMADNPGTSVEG
                     VLMLRSSMAKCRL"
     exon            1..119
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            120..329
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            330..445
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            446..554
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            555..689
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            690..831
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            832..961
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            962..1068
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            1069..1158
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            1159..1224
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            1225..1403
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            1404..1503
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            1504..1665
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            1666..1774
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            1775..1910
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            1911..2119
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
     exon            2120..2262
                     /gene="Sytl5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtctaaga actcggagtt catcaatctg tcatttttat tggatcatga gaaggaaatg
       61 atcctcggag tcctaaagag agatgaatat ttgaaaaagg tggaagacaa gaggataagg
      121 aagctgaaaa atgagctttt agaagccaag cgtaggagtg ggaagactca ccaagaggcg
      181 aatagagtct gtgttcactg tcagaaaagc ctgggcctca tctttgaccg gggagctcca
      241 tgccaagcct gttcactcag agtgtgcagt gagtgtcgag tcacgggact tgatggcagc
      301 tggaagtgca ctgtctgtgc taaagtcgcg cagctaagga tcataagtgg agaatggttc
      361 ttggaagaaa aggcaaagcg tttcaaacaa gtcaatgttc tgggcactga tgttgttcga
      421 cagtccatct taagaagaag tccagggtct gaagaaatac aaaaccaaga gcaagcacac
      481 caaggtgcag acaagtcaga tactttgtct tcagtcaggc agaaggccac tcatgatgga
      541 ccaaagagga agggttttct tcttagcaag ttcagatcag caaccagagg agaaatcaaa
      601 actccaaaag ctgaaagtgg aaggagctat agcttggacc tagacaatca aaatcttcag
      661 agtttcaagt cggtctctgg ctcagacagg ggaagtacca cttcatcaga tctcactgac
      721 caggaggctg gacgaggagc accaaaaggc agctgcagca atggtggaat cccggttact
      781 cagaggtcac cagccccaag tgctcgtagt gtgacctcca tcagcagcag agaacatggt
      841 tttgaaaatt ccatggcttt ggctaccatt gaaagcatct ctgaggaact cacaaagagt
      901 catcgcagga acacgtctgg tacaccttcc atagcagtgt ctggtacctc gctgtcctca
      961 gagcggagtc gatctgagtt agatttgagt gagtcatttg cagaagactt agaggacact
     1021 tcaagcataa gaagcagatc tgttcctggg gctttagaca aagacttgaa ttccttagaa
     1081 gacacagaag atggtgtgga cttagtgtcc tccaggtttt ctgcaaatac ccacagtctg
     1141 gcaagtggcc tgtcaactag ctcccaagca ggatctgata ggaagaggag ctacctacat
     1201 gtgcctgatg ctgactcaga cactactagc cttaacagca tgatgagtgt ttacagtgaa
     1261 acgggagact atggcaatgt gaaagtcacc ggtgagattc ttctccacat cagctactgc
     1321 tacaaaactg gcgggctata catttttgtc aagaactgca gaaacctggc catcggagat
     1381 gaaaagaaac agaggacaga tgcttatgtc aagtcatacc ttcttccaga caagacccga
     1441 aacaataagc gaaagaccaa aatcaggaca ggtaccaatc cagaattcaa tgaaacatta
     1501 aagtatacta tcagccacac ccagctggaa acaagaactc tgcagctctc agtctggcac
     1561 tacgatcggt ttggacgcaa cagtttcctg ggagaggtgg agattgcttt tgactcatgg
     1621 aacttcgaaa atccatgtga tgaatggttt gtgcttcagc ccaaggtgga gttggctcct
     1681 gatattagcc ttcaatataa aggagagcta accattgttt tgcgttatat tcctccagag
     1741 gagaacctta tatttccagt agaacaacct caaggaaaga agatctttaa aaagggaaag
     1801 aagaaagagt cacctgccat ttctggggga atacttgaag ttttcatcaa agaagcaaag
     1861 aatctgacag cagtaaaagc agggggcact tctgacagct tcgtcaaggg ctacctgctt
     1921 cctgatgata acaaagccac caagcacaaa actgcagttg taaaaaagag tgtcaatcct
     1981 cagtggaacc atgtgttcat attcagcggt ctgtatcctc aggatataca gaatgcttgc
     2041 ctagaactca ccatctggga taaggaggcc ttttccagca acatctttct aggaggtgtt
     2101 cgtttaaatt ccggaagcgg tattagccat gggaaggctg tggactggat ggactctcgt
     2161 ggggaagaac aacgcctttg gcaaaagatg gctgacaacc ctgggacatc tgtagaagga
     2221 gttctcatgc tacgttctag catggcgaaa tgtaggctct ga
//
