LOCUS       NM_023974               1586 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus synaptoporin (Synpr), mRNA.
ACCESSION   NM_023974
VERSION     NM_023974.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Lee,K.J., Queenan,B.N., Rozeboom,A.M., Bellmore,R., Lim,S.T.,
            Vicini,S. and Pak,D.T.
  TITLE     Mossy fiber-CA3 synapses mediate homeostatic plasticity in mature
            hippocampal neurons
  JOURNAL   Neuron 77 (1), 99-114 (2013)
   PUBMED   23312519
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Dai,J., Ji,C., Gu,S., Wu,Q., Wang,L., Xu,J., Zeng,L., Ye,X.,
            Yin,G., Xie,Y. and Mao,Y.
  TITLE     Cloning and sequence analysis of the human cDNA encoding the
            synaptoporin (delta), a highly conservative synaptic vesicle
            protein
  JOURNAL   Mol Biol Rep 30 (3), 185-191 (2003)
   PUBMED   12974474
REFERENCE   3  (bases 1 to 1586)
  AUTHORS   Knaus,P., Marqueze-Pouey,B., Scherer,H. and Betz,H.
  TITLE     Synaptoporin, a novel putative channel protein of synaptic vesicles
  JOURNAL   Neuron 5 (4), 453-462 (1990)
   PUBMED   2206533
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF306459.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF306459.1, FQ101854.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840129, SAMN14984024
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p16-p15"
     gene            1..1586
                     /gene="Synpr"
                     /note="synaptoporin"
                     /db_xref="GeneID:66030"
                     /db_xref="RGD:708366"
     exon            1..286
                     /gene="Synpr"
                     /inference="alignment:Splign:2.1.0"
     CDS             263..1060
                     /gene="Synpr"
                     /note="synaptorin"
                     /codon_start=1
                     /product="synaptoporin precursor"
                     /protein_id="NP_076464.1"
                     /db_xref="GeneID:66030"
                     /db_xref="RGD:708366"
                     /translation="MCMVIFAPLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIA
                     FAYPFRLHQVTFEVPTCEGKERQKLALVGDSSSSAEFFVTVAVFAFLYSLAATVVYIF
                     FQNKYRENNRGPLIDFIVTVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQ
                     PSNKCMAVHSPVMSSLNTSVVFGFLNFILWAGNIWFVFKETGWHSSGQRYLSDPMEKH
                     SSSYNQGGYNQDSYGSSGGYSQQASLGPTSDEFGQQPSGPTSFNNQI"
     exon            287..411
                     /gene="Synpr"
                     /inference="alignment:Splign:2.1.0"
     exon            412..610
                     /gene="Synpr"
                     /inference="alignment:Splign:2.1.0"
     exon            611..802
                     /gene="Synpr"
                     /inference="alignment:Splign:2.1.0"
     exon            803..1586
                     /gene="Synpr"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tatcaggttc ctgtagtcag ctgtgggctg tcactgtcta ctaatatgac tgttttccca
       61 tctctctgca aggaggcaga agctgctatc tgattggtat agcatctgac tttccctctg
      121 cattgatttc tggtcctcct cctttgcttc agaaagagag ggacaagagc tggtgctgtg
      181 gatagaaaag cttcaatttt agtatgagac agcctctatt ttttttcagg agagggaagt
      241 tggattatca attcttttgt aaatgtgtat ggtgatattt gctccgcttt ttgcaatctt
      301 tgcatttgca acatgtggcg gctattccgg aggcctgcgg ctgagcgtgg actgcgtcaa
      361 caagacagaa agtaacctca gcatagacat agcctttgca tatccattca ggctgcacca
      421 ggtgaccttt gaagtgccca cgtgtgaggg aaaggaacgg cagaagctgg cgctggttgg
      481 agactcctca tcctcagcag aattctttgt caccgtggct gtgttcgcct ttctctactc
      541 cctggctgcc actgtcgtgt atattttctt ccagaacaag taccgcgaaa acaaccgggg
      601 cccactcatt gactttatcg tcactgtagt cttttcattc ttgtggctgg tgggttcgtc
      661 tgcctgggca aaaggactgt ctgatgtcaa agtggcaaca gatcccaaag aagtcctgtt
      721 gctgatgtca gcttgcaagc agccttccaa caagtgcatg gctgtccata gccctgtcat
      781 gtccagctta aatacatctg tggtcttcgg gtttttgaac tttatcctct gggctggaaa
      841 catttggttt gttttcaagg agactggctg gcattcctcg ggacagagat acctttccga
      901 ccccatggag aagcactcca gcagctacaa tcaaggcggc tacaaccaag acagttatgg
      961 gtcaagtggt gggtacagtc agcaggcgag tctggggcca acttctgatg agtttggcca
     1021 acagcctagt ggtcccactt cctttaacaa tcaaatataa cggagtatca ctcaccacct
     1081 tccatttcag tagcagaaga attttttaag agtttcaatc aattattaat gcagagaatg
     1141 ttgaatgtaa atcagagatc tgtagtcctc attaagacag aagggcctgg gtggtgataa
     1201 atgggactta gaaatgaaat gtcataaaga gatacattat tcatcacgga tgggtaactc
     1261 aaaagtacct ggttctacac acagatactt ttatggtcgc tttgtatgtg tggtaaaata
     1321 gtagaagcat tttgtagcct aaagtctcta gtatgtaatg tgtgtaaagt accataaata
     1381 gtactgagtt ttcatatgtg ttttgatgca acagatattt tactgatttc tagaagacta
     1441 tttcatgaat cgcattgtgc atgtgttact attttttagt tgaagacctt caagactgca
     1501 actctgtttt agatatttat tctctactgg tttcacttga tacaacaatg tgtgtatgat
     1561 ttaatgcatg agtaagcatt gtctcg
//
