LOCUS       NM_001135253             710 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus synaptonemal complex central element protein 3
            (Syce3), mRNA.
ACCESSION   NM_001135253 XM_001055196 XM_001072583
VERSION     NM_001135253.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Schramm,S., Fraune,J., Naumann,R., Hernandez-Hernandez,A., Hoog,C.,
            Cooke,H.J., Alsheimer,M. and Benavente,R.
  TITLE     A novel mouse synaptonemal complex protein is essential for loading
            of central element proteins, recombination, and fertility
  JOURNAL   PLoS Genet 7 (5), e1002088 (2011)
   PUBMED   21637789
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Kouznetsova,A., Benavente,R., Pastink,A. and Hoog,C.
  TITLE     Meiosis in mice without a synaptonemal complex
  JOURNAL   PLoS One 6 (12), e28255 (2011)
   PUBMED   22164254
REFERENCE   3  (bases 1 to 710)
  AUTHORS   Hu,T., Wang,Z., Zeng,F., Chen,X., Gu,Z., Zheng,L. and Tong,Q.
  TITLE     Expression pattern of testis-specific expressed gene 2 in
            cryptorchidism model and its role in apoptosis of spermatogenic
            cells
  JOURNAL   J Huazhong Univ Sci Technolog Med Sci 30 (2), 193-197 (2010)
   PUBMED   20407872
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On or before Sep 28, 2008 this sequence version replaced
            XM_001072583.1, XM_001055196.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.275021.1, BF389551.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-109               JAXUCZ010000007.1  122344626-122344734 c
            110-710             JAXUCZ010000007.1  122336427-122337027 c
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..710
                     /gene="Syce3"
                     /note="synaptonemal complex central element protein 3"
                     /db_xref="GeneID:689933"
                     /db_xref="RGD:1586367"
     CDS             1..267
                     /gene="Syce3"
                     /codon_start=1
                     /product="synaptonemal complex central element protein 3"
                     /protein_id="NP_001128725.1"
                     /db_xref="GeneID:689933"
                     /db_xref="RGD:1586367"
                     /translation="MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAY
                     DMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ"
     exon            1..109
                     /gene="Syce3"
                     /inference="alignment:Splign:2.1.0"
     exon            110..710
                     /gene="Syce3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggctgatt ccgatcctgg ggaaagaagc tatgataaca tgctgaaaat gctgtccgac
       61 ctgaacaagg acctggaaag gctgttggaa gagatggaaa aaatctcagt gcaggcaacc
      121 tggatggcct acgatatggt ggtcatgcgt accaacccca cactagcaga gtccatgcgc
      181 cggctagaag atgccttcct caactgcaaa gaggagatgg agaagaactg gcaagagcta
      241 ctcaccgaga ccaaacgcaa gcagtgagcc gccatctgtc accagcctgt gggccgaagc
      301 cagggacatg ggtccagaag cccagacgtg tagccgtgtg catggtactt gtttctcaat
      361 aaacttattt tcaagcaaac caacgccccc ctctctgtct tgcacaatag ttgacccaac
      421 ttgacagcag atttcgtaag caaagatgaa aagcgtgagg aatgctttca gtgagccaaa
      481 cgccggtctg tatcagttgt accaagcata gaagagaaag aaacaaaacc tggctggcaa
      541 gattgtggat gcagacactt gcccgagatt gatagcccga attcagtccc tactcccaca
      601 tagagactcg ggagagaagc agttcacaaa gctgttctct ggcctctgca ctcccaccat
      661 gacacatgcg ttcccctcac aataatcatg aataaactct ctttaaaata
//
