LOCUS       NM_001025058            1471 bp    mRNA    linear   ROD 10-FEB-2025
DEFINITION  Rattus norvegicus synaptonemal complex central element protein 1
            (Syce1), mRNA.
ACCESSION   NM_001025058 XM_577846
VERSION     NM_001025058.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1471)
  AUTHORS   Kouznetsova,A., Benavente,R., Pastink,A. and Hoog,C.
  TITLE     Meiosis in mice without a synaptonemal complex
  JOURNAL   PLoS One 6 (12), e28255 (2011)
   PUBMED   22164254
REFERENCE   2  (bases 1 to 1471)
  AUTHORS   Hamer,G., Gell,K., Kouznetsova,A., Novak,I., Benavente,R. and
            Hoog,C.
  TITLE     Characterization of a novel meiosis-specific protein within the
            central element of the synaptonemal complex
  JOURNAL   J Cell Sci 119 (Pt 19), 4025-4032 (2006)
   PUBMED   16968740
REFERENCE   3  (bases 1 to 1471)
  AUTHORS   Costa,Y., Speed,R., Ollinger,R., Alsheimer,M., Semple,C.A.,
            Gautier,P., Maratou,K., Novak,I., Hoog,C., Benavente,R. and
            Cooke,H.J.
  TITLE     Two novel proteins recruited by synaptonemal complex protein 1
            (SYCP1) are at the centre of meiosis
  JOURNAL   J Cell Sci 118 (Pt 12), 2755-2762 (2005)
   PUBMED   15944401
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CK596157.1 and BC083907.1.
            
            On Feb 28, 2009 this sequence version replaced NM_001025058.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083907.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-18                CK596157.1         1-18
            19-1471             BC083907.1         1-1453
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q41"
     gene            1..1471
                     /gene="Syce1"
                     /note="synaptonemal complex central element protein 1"
                     /db_xref="GeneID:502372"
                     /db_xref="RGD:1559853"
     exon            1..105
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..1016
                     /gene="Syce1"
                     /note="telomeric protein"
                     /codon_start=1
                     /product="synaptonemal complex central element protein 1"
                     /protein_id="NP_001020229.2"
                     /db_xref="GeneID:502372"
                     /db_xref="RGD:1559853"
                     /translation="MATRPQPLSVEPEGSADLLHGPEGARGRRGSTQKIEDLMEMVEK
                     LQKVGSLEPRIEVLINRINEVQQAKKKASEELGEAQTVWDTLQKEVDSLHEEKVRLKD
                     ILNRKEETLRIMQLHCQEKESEAERKHSMLQECKDRISFLNNQIDNEKAKLRRLRLDF
                     EEHLETLMSQHKDTMEFHKPEHLTEEMSVLDSSKEQLLKEEKLIKAKLEDVQHRLCAL
                     CGPEGSSTFSDGLFLRSHEAAAAMQMFKDENKKAEELLEAAAQQHQQLQQRCRQLQQK
                     RQRLKEELEKHGVQILAQIQSTQKEEDSSWRTASPKPLEAHKETVQERPSSRT"
     exon            106..168
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     exon            169..228
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     exon            229..303
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     exon            304..351
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     exon            352..406
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     exon            407..496
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     exon            497..560
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     exon            561..627
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     exon            628..751
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     exon            752..862
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     exon            863..950
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
     exon            951..1447
                     /gene="Syce1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtggcagct gaagaggtgg agcagtatgg ccaccagacc gcagccgttg agtgtggagc
       61 ccgagggatc agcagacctg ctccacgggc ctgagggggc cagagggcgg cgtggatcca
      121 cacagaaaat tgaagactta atggaaatgg tggaaaagtt gcagaaagtg ggaagtctgg
      181 agccccgcat tgaggtcctg attaaccgca ttaatgaggt tcagcaagca aaaaagaaag
      241 ccagtgagga gcttggagag gcccagactg tgtgggatac cctgcagaag gaagtggact
      301 cattacacga agagaaagta cgtctgaagg atatcttgaa cagaaaggaa gagaccctga
      361 ggattatgca gctgcactgt caggagaagg aaagcgaggc agagaggaag cacagcatgt
      421 tgcaggaatg taaagacaga atttctttcc tgaacaatca gatcgacaat gagaaggcca
      481 aactaagacg actgaggttg gattttgaag aacatctgga gactttgatg agtcaacata
      541 aggacaccat ggaatttcat aagcctgaac atctgacaga ggagatgagt gttttggaca
      601 gcagcaagga gcagctgctc aaggaagaga aactgatcaa ggcaaagctg gaggatgtgc
      661 agcatcggct gtgtgccctg tgtgggcccg agggttcttc caccttctct gatggactct
      721 tcctccgaag ccatgaggca gctgcagcaa tgcagatgtt caaggatgag aacaagaaag
      781 ccgaggagct ccttgaggct gcagcgcagc agcaccagca gctgcagcag aggtgccgcc
      841 agctgcagca gaagcggcag aggctgaaag aagagctgga aaagcatggg gtacagatcc
      901 ttgctcaaat tcagagtacg caaaaggaag aggacagctc gtggaggacg gccagtccta
      961 agcccttaga agcccacaag gagacagtcc aagagcgccc atcaagcagg acctaacctc
     1021 ctcagcccgg aggacatact agctccaaac atcacaaggg ggtgttttgt gtagcctgct
     1081 tcatcggagt atgtgctgag tggaaggatg ggtgttggtg ccaagctcct caagtctttg
     1141 aacctggaga tttcttggct caattttgat tctcgactag cttagggtcc acactgcagg
     1201 cccttaataa atgcttcccc tgtcccctgc tcaccattag tatctgtcac actcttccta
     1261 ctcttagaca gaagggtaca gatctggacc ttctcatagg atctgaagcc actttgtaat
     1321 ttagttccct catgtaggcc cagtgtagca cagactttga aacaaaagga agatatatca
     1381 ccagctttta attcttgcta taagccatct cattcttcaa gcaaaataaa tgtaatttga
     1441 gtctgcaaaa aaaaaaaaaa aaaaaaaaaa a
//
