LOCUS       NM_001246661             710 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Rattus norvegicus SWI5 homologous recombination repair protein
            (Swi5), mRNA.
ACCESSION   NM_001246661 XM_001079909 XM_575112
VERSION     NM_001246661.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Yuan,J. and Chen,J.
  TITLE     FIGNL1-containing protein complex is required for efficient
            homologous recombination repair
  JOURNAL   Proc Natl Acad Sci U S A 110 (26), 10640-10645 (2013)
   PUBMED   23754376
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Yuan,J. and Chen,J.
  TITLE     The role of the human SWI5-MEI5 complex in homologous recombination
            repair
  JOURNAL   J Biol Chem 286 (11), 9888-9893 (2011)
   PUBMED   21252223
REFERENCE   3  (bases 1 to 710)
  AUTHORS   Akamatsu,Y. and Jasin,M.
  TITLE     Role for the mammalian Swi5-Sfr1 complex in DNA strand break repair
            through homologous recombination
  JOURNAL   PLoS Genet 6 (10), e1001160 (2010)
   PUBMED   20976249
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC082799.1.
            
            [WARNING] On Jan 7, 2025 this sequence was replaced by
            NM_001246661.2.
            
            On or before Oct 10, 2011 this sequence version replaced
            XM_001079909.2, XM_575112.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC082799.1, CF110264.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p12"
     gene            1..710
                     /gene="Swi5"
                     /note="SWI5 homologous recombination repair protein"
                     /db_xref="GeneID:499779"
                     /db_xref="RGD:1559966"
     exon            1..103
                     /gene="Swi5"
                     /inference="alignment:Splign:2.1.0"
     exon            104..152
                     /gene="Swi5"
                     /inference="alignment:Splign:2.1.0"
     exon            153..277
                     /gene="Swi5"
                     /inference="alignment:Splign:2.1.0"
     CDS             168..437
                     /gene="Swi5"
                     /note="protein SAE3 homolog"
                     /codon_start=1
                     /product="DNA repair protein SWI5 homolog"
                     /protein_id="NP_001233590.1"
                     /db_xref="GeneID:499779"
                     /db_xref="RGD:1559966"
                     /translation="MIDEGEEVTEETLNSDIQKLKEKQDMLDKEISQLIAEGYRVIEL
                     EQHISLLHEYNDIKDVSQMLLGKLAVTRGVTTKELYPDFDLNPND"
     exon            278..372
                     /gene="Swi5"
                     /inference="alignment:Splign:2.1.0"
     exon            373..685
                     /gene="Swi5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgatttctgg ttacctgaaa agcagccgtt taaccccaat cctggaccct tcagagttta
       61 agcccacccc gctccgggtg ccccggacct tagggttcag gaggggtgag tcagaattca
      121 gccgaattta ccatgggggc taccgatcgc cgcaacgacc attccccatg attgatgagg
      181 gtgaggaagt caccgaggag accttgaatt ctgacattca gaaactgaag gagaagcagg
      241 acatgctgga caaggagatc tcccagttaa tagccgaggg ctatcgtgtg attgagctgg
      301 agcagcacat ctccctcctc catgagtaca atgacatcaa ggatgtgtcg cagatgctgc
      361 tgggcaaact ggctgtgact cgaggtgtta ccaccaagga gttatatccg gattttgatc
      421 taaacccaaa tgactgagca gcttctcgga gatcttcatc tgcagtccac agggacagga
      481 ggatgaaggc atagaggcag agagcccaga cagtatgttc atatgatttc cagatttaaa
      541 aaatgctaaa agccctccag agtttggagt gggtcctaga gaagaggggt cttgggaggg
      601 gtgggtattg tcagtgctag gatttctaaa cattttgtga gtggatgtgt ggttgtccct
      661 tttgttaata aatctatgag caatcaaaaa aaaaaaaaaa aaaaaaaaaa
//
