LOCUS       XM_008762863            2998 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus SVOP like (Svopl), transcript variant
            X1, mRNA.
ACCESSION   XM_008762863
VERSION     XM_008762863.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008762863.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008762863.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2998
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2998
                     /gene="Svopl"
                     /note="SVOP like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins, and 80%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:500085"
                     /db_xref="RGD:1566053"
     CDS             399..1739
                     /gene="Svopl"
                     /codon_start=1
                     /product="putative transporter SVOPL"
                     /protein_id="XP_008761085.2"
                     /db_xref="GeneID:500085"
                     /db_xref="RGD:1566053"
                     /translation="MGFCFLLLLQVVEAMEIMLIAVVSPVIRCEWQLENWQVAFVTTM
                     VFFGYMVSSILFGLLADRYGRWKILLLSFLWGAYFSLLTSFSPSYIWFVFLRTMVGCG
                     VSGHAQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIISMASVVIPTIGWRWLIRIA
                     SIPGIILIMAFKFIPESARFNVSTGNTQAALDTLESIAKMNRSVMPEGRLVEPILEKR
                     GRFADLLESKYLRTTLQIWIIWLGISFAYYGVILASAELLERDLVCGSKSESEPEVVE
                     NMGDAEEGRSPCYCHMFAPSDYRTMIISTLGEIALNPLNILGINFLGRRLSLSITMGC
                     TALFFLLLNICTSSAGLIGFLFMLRALVAANFNTIYIYTAEVYPTPMRALGMGTSGSL
                     CRIGAMVAPFISQVLMSASFLGALCLFSSVCVVCAISAFTLPIETKGRALQQIK"
ORIGIN      
        1 ttttgattca gggtcttgaa gccagccaat gctggtctca aacccatgat gttcctgcct
       61 cgtgggatca caggtatatg ctactgtgac tggctctact ctatccctct ccacctagtg
      121 gttcccaact ttctaattct gtgacccttt aatacagtgc ctcatgttgt ggtgaccccc
      181 tcaaccatca aattattttc attgctgttt cataactgta aatttgctac tgtagatatt
      241 tgtgttgttt tctgatgatc ttaggtgagc ccgttaacag gtcgttcaac ccctaggttg
      301 aggaccccca gattgagaac tgctgaccta ggggaatgag gacactggga ctaggagggt
      361 ggcatgcttg tgtggaggtg acatgagctg gtgtatagat ggggttttgt ttcctccttc
      421 tccttcaggt tgtggaggcc atggagatca tgttaatagc agttgtgtct cctgtcatcc
      481 gctgtgaatg gcaactggag aactggcagg tggcgtttgt caccacgatg gtgttttttg
      541 gctacatggt atccagcatc ctctttggtc tcttggctga cagatatggc cgctggaaga
      601 tattgctgct ctcattcctg tggggagcct acttctcctt actgacctct ttctctccct
      661 cctacatctg gtttgtcttt ctgcggacaa tggtaggctg cggagtgtct ggccatgcac
      721 aagggttaat cataaagact gaatttttgc ccacaaaata ccgaggctac atgctgccct
      781 tgtctcaggt tttctggctt gctggctccc tgctcatcat cagcatggcc tccgtggtca
      841 tccccaccat tgggtggcgc tggctcatcc gcattgcctc catccctggc atcatcctca
      901 tcatggcctt caagttcatc cctgaatctg ctcgcttcaa cgtctccact gggaacacgc
      961 aggctgcact ggacacccta gagagcattg ccaagatgaa ccgctcagtc atgccagagg
     1021 gacggctggt ggagcccatt ctggagaaga gaggaagatt tgcagatcta ctagagtcta
     1081 aatatcttcg gaccacatta cagatctgga tcatatggct ggggatttct tttgcctatt
     1141 acggggtcat cctggccagc gctgagttac ttgagcggga tctggtctgc ggttcaaagt
     1201 cggagtcaga gccagaggtg gtggagaaca tgggggacgc agaggagggc cgcagtccct
     1261 gctattgcca catgtttgcg ccctctgact acaggaccat gatcatcagc accctcgggg
     1321 aaatcgcttt gaacccttta aatatcctgg gcatcaactt cctgggcaga cgactaagcc
     1381 tttccatcac catgggctgc acggctttgt ttttccttct cctcaatatc tgcacttcaa
     1441 gtgccggcct cattggcttc ctcttcatgc tgagggccct ggtggcggcg aacttcaaca
     1501 ccatctacat ttacactgct gaggtctacc caacaccgat gcgtgctcta gggatgggga
     1561 ccagtggctc cctctgccgc attggagcga tggtagctcc atttatatcc caggtcctaa
     1621 tgagtgcctc attcctggga gccctatgtc ttttctcctc tgtctgtgtt gtgtgtgcca
     1681 tttctgcatt tactcttccc attgagacca aaggacgtgc tttgcagcaa attaaatgag
     1741 gagctgcaat actatgtgga gaaaagtatg tttgatcttc atggagttac tgagtatatt
     1801 ttaaaatggg tttatttctg cactgataat taagaaagca agtatatatt aaggcaacca
     1861 aggcacacac acaagatgca gtggggctct tccttagaaa caatatatgc aaatccctta
     1921 taggatatat actttgccac attgtagttc ctgcctgaaa tcccagcata tacaggttga
     1981 gggggcagga tgaacaggag ttgtaggtca tccttagtta taaagtaact ttgaggccag
     2041 cctgggctac atgagatcct gtctacacac aagcaattta cccaccaaac cacttacccc
     2101 tcaaacaaac caacaaacct tgagattgaa tgggactagg tggtgagggt ggagaatgtt
     2161 tcttctcatt tggtatcaac actacttaat cttagacaaa cacttggtgt tgccccattt
     2221 ggtctatggc tgaaggacag agattctgta gctaaggcaa gaaattcgac tgattatcat
     2281 tgaatttaaa ttacggtttt ggtcatttgc agaactttat tctgtacata gctatcaaga
     2341 agctgggaat aaagctaatt ttctccatcc accattactc ctttttttaa tcataggagg
     2401 gatatcccac gatgcacgtg cagctttccc gtaacatgta attacttcca tactgtttgc
     2461 ggtatacaag ttctattagg aaagacatgc tgtggaaggg aagcatctaa agcatctgca
     2521 tcgagattgt cttttaccgc tgttcaggct tgctatggag gaggcccatt acagttgcag
     2581 accactcggc tggctgagga tccccactac cctcaacagt ggaaaaagac tgcagttgca
     2641 acctcaatga aatgctgtgt tagcaaactg cataaaagag gcataacctc tgtccaaagg
     2701 gggagcaagt aattcctatt tgatccgttc tatgaatgga tcaaaatcag cttcttataa
     2761 cgaaggtgca gttattaaca cattagtagt ttaagggatg ggttccaggg cacctggtgg
     2821 gaaccaaaca ttcatcttac agaaaatggc acagtatgtg tatatccgtc atctccagat
     2881 tattgtaaca atgctatgta taaaataaca aagatgtcta tgtatattta gcatgaatac
     2941 tttttctttt ggttttttga gacagggttt gtgtttagct ctggctatac tgaaactc
//
