LOCUS       NM_001398930            5001 bp    mRNA    linear   ROD 12-JUN-2023
DEFINITION  Rattus norvegicus sushi domain containing 6 (Susd6), mRNA.
ACCESSION   NM_001398930 XM_003750190
VERSION     NM_001398930.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5001)
  AUTHORS   Polato F, Rusconi P, Zangrossi S, Morelli F, Boeri M, Musi A,
            Marchini S, Castiglioni V, Scanziani E, Torri V and Broggini M.
  TITLE     DRAGO (KIAA0247), a new DNA damage-responsive, p53-inducible gene
            that cooperates with p53 as oncosuppressor. [Corrected]
  JOURNAL   J Natl Cancer Inst 106 (4), dju053 (2014)
   PUBMED   24652652
  REMARK    Erratum:[J Natl Cancer Inst. 2014 Aug;106(8):dju199
            doi:10.1093/jnci/dju199]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000166.1.
            
            [WARNING] On Apr 2, 2024 this sequence was replaced by
            NM_001398930.2.
            
            On Dec 28, 2021 this sequence version replaced XM_003750190.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR8487227.230973.1,
                                           SRR8487230.114029.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132266, SAMD00132267
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-223               JACYVU010000166.1  437299-437521
            224-449             JACYVU010000166.1  475503-475728
            450-647             JACYVU010000166.1  518361-518558
            648-786             JACYVU010000166.1  520216-520354
            787-1214            JACYVU010000166.1  524471-524898
            1215-5001           JACYVU010000166.1  527300-531086
FEATURES             Location/Qualifiers
     source          1..5001
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q24"
     gene            1..5001
                     /gene="Susd6"
                     /note="sushi domain containing 6"
                     /db_xref="GeneID:678893"
                     /db_xref="RGD:1595528"
     exon            1..223
                     /gene="Susd6"
                     /inference="alignment:Splign:2.1.0"
     exon            224..449
                     /gene="Susd6"
                     /inference="alignment:Splign:2.1.0"
     CDS             329..1240
                     /gene="Susd6"
                     /note="sushi domain-containing protein 6"
                     /codon_start=1
                     /product="sushi domain-containing protein 6 precursor"
                     /protein_id="NP_001385859.1"
                     /db_xref="GeneID:678893"
                     /db_xref="RGD:1595528"
                     /translation="MCHGRIAPKSSSEFVVTSVGHGVFLQLVILCSLLGDGLASVCPL
                     PPEPENGGYICHPRPCKDPLTSGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEVSC
                     HLNEDKETHASLGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVSG
                     DQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQ
                     GQAACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRQTHKDTAD
                     SENSDIQSLLSLTSEEYTDDIPLLKEA"
     exon            450..647
                     /gene="Susd6"
                     /inference="alignment:Splign:2.1.0"
     exon            648..786
                     /gene="Susd6"
                     /inference="alignment:Splign:2.1.0"
     exon            787..1214
                     /gene="Susd6"
                     /inference="alignment:Splign:2.1.0"
     exon            1215..5001
                     /gene="Susd6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtgacgctg gcgcagccac cgccgcgttc catcctctgg agtcggtcac agctcgcgtc
       61 ctcctcctcc ctcagcgccc ggcagcgtga gacagaccag ggcacgcgag gcgtcgcggg
      121 gacccgacaa ggagtgcagg cgggcgcgcg cagcggcgga gcgagtttgg cggcgcggga
      181 gctgctagcg ttcccttccc ggaggtctcg gcgccgctcc cgggtgaagc tactcctcgc
      241 tggctttagg attcttctgg attttaagtc gttctttaaa aaaaaaaaaa aaaaaaccaa
      301 ataagtaaaa acctcggacg gataaaagat gtgccatggc aggatagcac caaagagcag
      361 ctcagagttt gttgtgactt ccgtcggtca tggagtgttt cttcaactgg tgatcctttg
      421 cagtctgctg ggagacggat tagcctccgt gtgccctctg ccgccagagc cagagaatgg
      481 tggctacatt tgtcatcccc ggccctgcaa agatcctttg acatcaggca gtgtcatcga
      541 gtacctgtgt gcagaaggct acatgttgaa gggtgactac aaatacctga cctgcaaaaa
      601 tggcgagtgg aagccagcca tggaggttag ctgtcatctc aatgaagaca aagaaaccca
      661 tgcatcactt ggggtccctg cgctgtccat agtggcttcc actgccagct ctgtggcact
      721 cattcttctc cttgtggtgc tgtttgtact gctgcagcca aagctgaagt ctttccatca
      781 cagcaggcgt gaacaggggg tttctgggga ccaagtctcc atcatggtgg atggggtcca
      841 ggttgcacta ccctcatatg aggaggctgt gtatggaagt tctggtcact gcatgccgcc
      901 ggctgacccc agagtacaga tcgttctgtc ggaagggtct gcacctagtg ggaggaacat
      961 gccgagggag cagcagctgc aaggccaggc ggcctgctcc tctgcaggtg gagaggatga
     1021 ggccccgggc cattctgggc tgtgtgaagc ctggggttcc caaggctccg agactgtgat
     1081 ggtgcaccag gcaaccacat cttcctgggt ggccggctca gggagcagcc ggcagacaca
     1141 caaagacact gcagattcag agaacagtga catacaaagc cttttatccc tcacatcaga
     1201 ggagtacaca gatgatatcc cactgttgaa agaagcatga gggctgccac tggcctctct
     1261 cctctctgcc cgtcctctct cttcctgtgg gtttgagtac catgtcctct ccagctgccc
     1321 cacctggatg cctgagctgc cacctgtgta tctccacgta cctgagagcc tgcaggccac
     1381 ctcgctggag actcaaggaa gattctcacc ttctgcccac tggacagctg gaggacctgg
     1441 ctctttgcct ggcccagcct tcccatctgt cagggacatg tctgaatgtg ctggattgaa
     1501 ccctcccttt ccctcagcct ctgggtccct tccagccagc tcttggtggc agccccacgt
     1561 cacgagggcc tgagcactgc tgtgtttact tgtgccttcc cccaccctgt ccaggttccc
     1621 tgttgtgcag gtgggttgct gtccacaggc cttagtgact atgccacctg tacccagggg
     1681 ctagacctga ggttgcagaa acagactgaa gagtagtaag gcactcaaag caggagtagc
     1741 tcatgttggg tccagatgtg ggtccctgag cttgccctgt gtgttgacac tgatggcatc
     1801 ttccttaact gagcataggt ttgggaagtc atgccaaagc cacccagcac tcagctgacc
     1861 agctctgtgc aggctcctgg ctcttttgag agtttccaag aagcacccag aagacctgtg
     1921 ggagggaaga agggtgtcag ataatgattg tcttcctaat atgcgagttc tcacttcctg
     1981 cttccagcac tggctgcctt ggccttggtc tctgttcctg gataagggag tcgcatgctg
     2041 tttcctggac cttgtcctag gtagctctgg cttccttgca gcccctagca ttctgaggtt
     2101 tgctgagata cccacaaaag ctcaccgggc ttttggcagt ctgggcaagc tgcccatttt
     2161 taggtttgtg gtgatggagg agaggctgag atgtataggc caagtccctg gtggctgcag
     2221 gcagctccag ccaggtcctg aggatcctct tcaccacagt catgtgcctt agtaactatg
     2281 cccaggaagt ggcctgctgt gccactgctc ctgctctgtc ctcctccctg cctgtccgtg
     2341 tcattgccca caagccactc tttatcttcc ctgccagctg atagacattg ttggctacta
     2401 gaaacctgag atgtgctggt ctagaagaaa tgctccagcc attttgctgg ggcctcctgt
     2461 ggccctgtac tgaatgctga caagtctggg taacagagcc ccaccaggct tctaccatcc
     2521 tgagaacaca gatgtggcat taaggaacgt gtgctttttc ttctcttctt cctcctcttc
     2581 ttcctcctct tcttcctcct cttcttcctc ctcctcctcc tcctcctcaa gccttggggc
     2641 tgggaaactt cagagccaat cttggactgc acctatgatg agcctctcta gggtggtaaa
     2701 agtaataaaa gcccagagta tttatagttc ctgacacagc agggttagct ccaggcatca
     2761 gtggcctcaa aaatagggga ataacttctc ctagcccact gcccactgcc tccattcaca
     2821 atgcacttta gtcctgtcat gcctggcttc ctgccaccct catctcctct cagggtaagg
     2881 gcagtgcctg ctgcccctgc tggccactcc cacacttacc caggagacca gtccattgtg
     2941 cccagtgttc aggcaagtat ggttggttga ggaatgggct agagaaggtg ctcaaacaca
     3001 cctagcagat gactaaaaca tacctagctg ttcctgtcat ggtcttacct agggctgggt
     3061 tccaaggccc caagccatct caccagggct cttcttcagc ttcagtggta tccagcctct
     3121 tcaagggaaa actgggcaag gagcaggggt cttctgaatg ggtcttcccc ttttgcttac
     3181 tgctcttcta aaatctgaat tctgttctcg gagtttcaaa atggaagata cttccctttc
     3241 tgtctttact ctgggctggt acccctgaca gattgcactt ttccttttgg acttgtttag
     3301 ccttgtaggt gactgggctg ggccttgggt aaaagaccct cctggtgcct ctcagcatcc
     3361 attagcctgc tctggggact caggcccaga cttgcccaac tgaaggttaa aggccatcca
     3421 tggtccccat cctcttgtca ctggctttta gaaggtcttt tcttgaggtt tcccacctac
     3481 tactgttgct ggcatctgtg acttcttcct acattgtttc ttctaaagca atttcttaac
     3541 taaccatcat gtgctgtggt ttctggggca tctggtcttt gtccattaca gaaggactgg
     3601 gggacttaat ttccttgaag tggagcctga ctagaaacag ggtcagtggt agatggcaga
     3661 ctcttgggca ggaagaagct tagagcaagt gggaaaaact aactatccag cctactttac
     3721 tgggctcacc tccggggcat cccgagactt gtccaaaaga ggcagtcagc accaaaggac
     3781 ttttacacag ggttttttgg tttgggagat gtttttgctt tttcatactt aaactgactc
     3841 gatgcaggtt ttatatcctg gtgacttgct gtcacattct atcagttttc aagggccaga
     3901 atgatgaaat aaataaatag aaaattccgt ccttccatgc cttagtttaa caggtaggcc
     3961 cagttctgtg ttttgtgtgt ttcgctgtgt aagaactgtg aaatgggcag acgactttgt
     4021 gggtttgttt ggttttataa ggcatttcaa tgtacattct acaagcactc cgtttgcaaa
     4081 gagaacctaa agtcactgtc ttccccattc atcttgccct cctccctgca ccccgagctt
     4141 tacagctctg taaagaagcc aggctacaag acagacaaag gtatactttt cctgctttga
     4201 gagtggccaa gtggggatag atggcagttg gcctttttcc tcccaatccc atcagagctc
     4261 ttgaatcact tggcttcctg cataacagta tctcctctgt cctgaggaac attctagcat
     4321 aggaaatggg atatgctgca gacatttcta gatcctccct ccctccccct ccttagagag
     4381 cagagaggct agaaaggaca catgcatgcc tactaaatag cctaatccag gtatgcgggt
     4441 ggctgacagg acagccagag cctcctctgt ggggccttag agaatatgtt acttggcatg
     4501 tgtttaggct gagtggtgag gtagatggtt tcctgggaag ccaaaggtag caggccagct
     4561 tttctgagat gtgacttaat actcggctga aaacctagtc gttttgaaca aagcaccccc
     4621 cccccacaca cacacacacc ctaccctgtc ctctcccagt agcagagctc accgtgggga
     4681 atgcggagta gggagaggaa gtagttgagg gttgcatggc tgtatccata ctggcctggc
     4741 ttcttgaggc tgtgcaccac tatgggatcc tttgcagaat ggtactcgtc atggtttaaa
     4801 acaacacatg cttaattgac tgtgcaggat gtcaatctgg gtttgcttta ttttatttta
     4861 tatatatatt ttttggtatc ctgtacattg cagtgggtat gaagatagta ttttaatatt
     4921 tgtacaaagt ttaatttaat tttaattgtt ctatgtatat aactgcattt ctaaataata
     4981 ataaaaattc ttatgaaggc a
//
